Gene
| Gene Model ID | aug_v2a.19659 |
|---|---|
| Locus | scaf11741 : 6896 ... 17577 : + |
| To GenomeBrowser | scaf11741:6896..17577 |
| Genes list of scaffold | scaf11741 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| nuclear intermediate filament protein | GO:0005882 GO:0031965 GO:0031981 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| aug_v2a.19659.t1 | gi|156372931|ref|XP_001629288.1| | predicted protein [Nematostella vectensis] | 0.0 |
| aug_v2a.19659.t1 | gi|47550983|ref|NP_999665.1| | nuclear intermediate filament protein [Strongylocentrotus purpuratus] | 0.0 |
| aug_v2a.19659.t1 | gi|260783332|ref|XP_002586730.1| | hypothetical protein BRAFLDRAFT_121709 [Branchiostoma floridae] | 0.0 |
| aug_v2a.19659.t1 | gi|742180291|ref|XP_010887939.1| | PREDICTED: lamin-B1 [Esox lucius] | 0.0 |
| aug_v2a.19659.t1 | gi|291387267|ref|XP_002710222.1| | PREDICTED: lamin-B1 isoform X1 [Oryctolagus cuniculus] | 0.0 |
Transcript
| Transcript ID | aug_v2a.19659.t1 |
|---|---|
| Definition | - |
>aug_v2a.19659.t1 ctttagctttctatcaaaaatggcgacgacaacagcttcaccacggactccagcgtcttcagaacgtatcggagcagctt cgcccaccaagatgtcccgcgagcaagagaaggacgaacttcagcatctgaatagtcgtcttgccgtgtacatcgaccgt gttaatgctttggaggaatccaacaacaaattaacggctgagataactttgacgaagtcgagaacacgcacagaggtgga aagcgtgaagaattcctttgaatcggagctagctgatgcacgaagacttttagacgagactgctaaggagaaagcacgag aacagatggaaaatagaaagaatgcatcagttgcagacgagttcaagaagaagtaagttgactgatttgtatgcctcaaa ctgaaagctctaatgtacgctcaattcctattattagaaaaaaatggtagtctacccaggcatattgaggaattaagaat atatttggcgcccaatctatctacattttagaactaaatgaaaaacgactggatgattcggtttgtagcagagagataag tatgtatggcttttctcttgaaatatgcggtcgcaacagaaataaaggtggggttgcacttaaataccatgaagtatgag cacatgccagatcacaacagtgaacaaaannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn 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gttttattaagataccataaataataatggagaatacaccagcattattgccaattaagcaaattttttttgcatgcact gagctcaataatnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnttaatgataactattattattatatcatctgttgccctttttacctc catttgctgctctctgattgttaaatgggatacttgttctaacgatccagtcatcaataactgaacccaatctttgggaa ctcaagggactatttattatagagttgacagatgtcttggagactgcctaactgcatgaaagttgtgtcataatgtttat tgcatttgtggtcgtggcctggaagtgttgatgataatgccttagttttatcaagcatttttatatctcttgtcaatgtc actgtggaaatgcaacatcaaaccagttttggaagattttatgtacacctttgtttctaatcttgctcttttttatgatt tccttgcaaatgaaagggatttgattataacatgctggatccatcataaaggataaactaggatgtaaaacagaaaactc ttaaatgaatggcccgttggttattaactttattgtcgttccctgtgaaggttaggtattacttgttgatagttcatagg attatttactccttaggtttgaaaaggaggttgcagcacataagaagactgaagatgagttaaaagcatcacacagaaag ctctctgaaaaagaagcacagctatcagtggtaaaccaggaagcaaggagccttcagtcagttcttgaagaactaagaaa ggagtgccaggaactcaaggattccctggagtctgctaaatatgcccttgagcaagaaacactctcaagggtggatcttg aaaacaaattacagtcaaaggatgaagaacttaatttcaagaaggaaatgtacaacaaagtaatgatttgttttctctgt attgaaaaaaaaagcaatgaaatgtttcattttgttggtttgtgttaattttgctgtataatattgtcttattattggtt tgtgaaatcatctttattcctgagagattctcacaggaatcaattgtgcattggccacagcacttttgcgataattatgt taatggttacactagatgaatgaataatgttgcttttcttttcttaataggaaattcttgatatccgttcccagttgaaa actgttgaaacacagcacattaaaatagcatctgatacaaagtcacgatatgaaggaatgttggctgaaaagctccagga actgagagatctgtatgacactgaagccaggcaatacagagatgaaacagacagtctttacagttccaaggtacataaat gatatcaacaatacttgaattattataacaaaatgcattaataattattattattgttgtcttgagcaggtaagacaggt attaatgcagtggttttgagttttctttattgtgggaggctggaaatcaattttttttattctggcctctctaatttnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntggtgattaagaatggcaacagttttattg tcgggtgttgttgatgcgaggattatgctagccttacgcttctgatgtggttaatcagtggcaacttccttttttgcttt ttagtatgatgaattacataagatgtcttccaaggacttagaagaattgacattggtcagagaggagagaagagcgctat ccattacagtggaaaatctcagatcagagcttaaccaattaaagtccaaggtagttaaattgttttcttagtcatgttag tgttgttggaattaggacagttaaagtgtgtattctctattggactggaacttggtagcttgcaatataggcttatgtgg gtgtatcttttgcaacaaactttagggtacaaaactagcctgttgatgatatagcattccttcaattatcaataattact ttgtttctcgtctcttccactgtaaagttaatttcaaatatacaaataagatatggatgcaaaaactagaatacgaagtt ttattatatggctacaatagtatgcaccctctgcttggctgctgagtggacaggattttattgcaatgaccaggtattgt tgtgtgaaattaaagtggtaaaatttgccctagatattgcaataataaagacttgtctcgttttggaagaaactgtttct tctgtcagttctggttttgattgcatggccaggtttgtttcagttcagtgaatgtgacctcaaatgacttattgtgtgca tgagtggacattgaaaaatgcttgtgtgtgtgctttcattgctaaaagagctgtataataataacttattaacctggtcc atttggtcattacagggatatctcacaccttggccttcatgtattgatcttgccattgcacagtcaatacatcaaggtct cagttggagatttccctgtaataacctcactctaataataagtggtatgaaaattccaagtggttgtgatgttttttgtt tttttccctgaaccgtaacagacactaacatcacaatttaatagtaattttaaagtttattttgtaaatttagtgcctct cagcatgagagtattgtaaacttattgtaatattgtaaagtgtaaaatagatatattttccatttgtaccagaatgatac cctattgttgagaattgaagatttggaaaagctgcgagctagtgatcaagaaagtgctgatcaagccatttccagtcgag ataaacagataagagagttgcggaaaagaatggattctgccctaagagactatgaggatctcatgggggtgaagactgca cttgacattgagatctcaacttacaggaaaatgcttgaaggagaagaatcaaggtttgtggaagaattgttttttttgtt gggggaggaggacttgttaaaaatggcttctgaaaacagcataaattttagaactacttctgagcgaaaggaggaagtaa ctgaggcaatgcaattttgacacaggattgttgtactgccaatgtgaaaatagctttactctttgtcttttgatgactgt cgtgtattgccatacttaacttgagcagacattttgcatccaattcttcttgaagttatgatgcaaattaggtattgagc caggttatgttcatgtgttctttgcatttaacgtttaatgtacagttgtaggctttttttttctgaatagtcaagtgggt gcaagatgttgaattttttcaaagatagcctcaaggtaaacattgttttaggtgatgctttaaagcttcgatatgacaga aacaattttccctttcaggttgaacatcactccgccagcctcacctgtgtttggatcttccatgaagccttcaagacgat ctgtcaagcgtgtgcgcacagaagaagaatccactggaacaaagtactctcatcaaggatacattcaaattaaggaagca aatgcagatggaaaatacatcaagttatttaacagtgggtctcaagtgagcgtttgttttgctttattaaatttttgatc ttagcaatttaactgacatttttttggtgaaatgaagaacaaaacttgaaagcattaatgtggaataaattattagtgat tcaaaattacttttcagtggttttgttagacttagtttggaattcaaacctagacttctgtgtgcacaagcctaacattc actttgaaccctgtttttttggggctcgatgcaccttaacccctttttcactttgcttaaagtatgtgctgcaggtaaaa tgcgagacaattaactttatttcattagagcttggaagaatctttttnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnaaaacttattgaaacccctgtaagtttttgttcaagtttagtacaatgatcacaataaacagcaaaagagagt agcaatgcaaacaagtcatatggggtgactgataattagtgatgttgctttgatgtcaggatgtttcattgggtggttgg ttattggagagatcagtggatggggacccagccattgtctacaagttcactcctaaatatgtcttgaaaagtggtagtta tgtgacagtaagtagtggtgtaataattattgtgttggtgaatcatgcaattattctttttcaatgcagaaaaatgcaac attgctttttgttaagttgataaagagtcaggaaagtgttgtaaaaattatgcaaacataaattttgttgagatattctt tactcctcgtcaaaaagggtttttcttcacatcagtgattgcatttgttgtgaaatgtagttgtgaccagtgagttgaaa ttacttactggatcagttaaacagttcttctgtttgtgtgatgaaaactaaaaaatagaaataatgacatgttaccgcat gaagtcagtttactgagaaattcagggaatggattcaaaccatggaaatgagttggaagattttgataatgcaggtttta tttattttttttggttgtaaatgttccactgattggattatttacctgcactaaggtaatgcgtcattttgttgctgatg ggttatatttcttgaaattcaggtttgggcttctcaaggtggtggccaacacaagccaccaacagacctggtatttcgac aaaaggcaagctggggcgttggcagagaaacacgtactttgttaaaggatgctgatggccaggttggtgactgtgtttgc aagtttcctgatgatgatgaggaagaagaagcctttaaccttaaactactttcaagtcaatctggggccaacttaaacta ttcagattttacttttttccatagtatacacaaaagagtatagtgtccatgtttaaatcgtgtataagatgtgtaattca aatataatggcaaataaaggaatgctgcttgactaaaagggaatagtcaataattcaaaggttctcttcgtgtttgacaa gtgttacatcgctgagagatggattggctttaaagtgtccatttaataagtgcactggaactttcgtaacctgaggaata tcagctcaagttgcttcttttgtaatacttactctaatatggtagcgctgcttaccagtgttaccctatttcaattgaag gtggaatggatatttgatttgaagtcaatttttctgaatagcactgaaacctcagttgaagggatggttgtcaaattttt attgcaccccccaccctccctccgcggtttggaagtatttcgtcaatcggatggactttgaccccacttttcttggctga aaggcttttcggggagtaaacttcaaactttctgttagaattcaccagttgggcgatgaatttttcaataaaactaactt ttatactagtaagttgaacctgctggatgttttcattgaccttcacaggaggcagcttctgcagtgagcgaggaagtgag catcgttaggactgatgaaatagacacccgcccagttatgtatgctaaaagtgatgtaagtattgtcgtccgttcgagtc gtgggttcgtgtatcacacacagctccacgtcgtcactcaaatcgcctagtaaacccgtgggactttttctgatcttcct tgatagtgtttgatgttacgatgagatatgctggattacttcttttggtactcaggctattcgtccaaactgtgctccaa atctttttgattagcaatggatttcctcactctcttttctttgttttcagggagaaacgggcaaaggctgtttaattcag tagggattttttgtatgcgaagtcataatctatctctttacttttaattagtcttagactgaaggttgaattattttggt ttatatctgtaaagtgtaaaaataagtgtgggaaatttttataattttttgtaactctcagtacataaaatgcctgtgaa atagctaatcatttttttaaagcaacatgttcttgttcaataggttattcccaacgtgcgatataattcactaaattgtt caagaatatttatatccgtatctccgagactgtattatcagtttaccaacgaaagtaatttggtaatttatgctagttta tcttatcagctcgcctctttagtaatcactgtgtttaagttaaagtaagcaacagcattgccatgcacaggcgtgtttgt tcgacttaaccattaacttaccattttggcaaactgggtataccacgaaagacagatggcggttcctgtacttttttttc tggcgacattggcatcattttataattaggcaaaagaaatgtatgaaactgtcgattccgtgccagaagtaagctgatga gtcattatttgggcgacagttcttgttttacctcgaggagatcatttttaaaaggcagataatattcatgtaggcgttta tgaagtttacactcatgcgattaataaacttcagaaatgatg |
|
Protein
| Protein ID | aug_v2a.19659.t1 |
|---|---|
| Definition | - |
>aug_v2a.19659.t1 MATTTASPRTPASSERIGAASPTKMSREQEKDELQHLNSRLAVYIDRVNALEESNNKLTAEITLTKSRTRTEVESVKNSF ESELADARRLLDETAKEKAREQMENRKNASVADEFKKKFEKEVAAHKKTEDELKASHRKLSEKEAQLSVVNQEARSLQSV LEELRKECQELKDSLESAKYALEQETLSRVDLENKLQSKDEELNFKKEMYNKEILDIRSQLKTVETQHIKIASDTKSRYE GMLAEKLQELRDLYDTEARQYRDETDSLYSSKYDELHKMSSKDLEELTLVREERRALSITVENLRSELNQLKSKNDTLLL RIEDLEKLRASDQESADQAISSRDKQIRELRKRMDSALRDYEDLMGVKTALDIEISTYRKMLEGEESRLNITPPASPVFG SSMKPSRRSVKRVRTEEESTGTKYSHQGYIQIKEANADGKYIKLFNSGSQDVSLGGWLLERSVDGDPAIVYKFTPKYVLK SGSYVTVWASQGGGQHKPPTDLVFRQKASWGVGRETRTLLKDADGQEAASAVSEEVSIVRTDEIDTRPVMYAKSDGETGK GCLIQ* |
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