Gene
| Gene Model ID | aug_v2a.16769 |
|---|---|
| Locus | scaf8012 : 80516 ... 84156 : + |
| To GenomeBrowser | scaf8012:80516..84156 |
| Genes list of scaffold | scaf8012 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| two pore calcium channel protein 2 | GO:0005245 GO:0005765 GO:0005829 GO:0005886 GO:0006939 GO:0010008 GO:0019901 GO:0034765 GO:0042802 GO:0051209 GO:0070588 GO:0072345 GO:0086010 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| aug_v2a.16769.t1 | gi|597782289|ref|XP_007254691.1| | PREDICTED: two pore calcium channel protein 2 [Astyanax mexicanus] | 3.0e-28 |
| aug_v2a.16769.t1 | gi|568952898|ref|XP_006508677.1| | PREDICTED: two pore calcium channel protein 2 isoform X2 [Mus musculus] | 5.0e-28 |
| aug_v2a.16769.t1 | gi|585686624|ref|XP_006893447.1| | PREDICTED: two pore calcium channel protein 2-like [Elephantulus edwardii] | 7.0e-27 |
| aug_v2a.16769.t1 | gi|625249442|ref|XP_007616010.1| | PREDICTED: two pore calcium channel protein 2 isoform X4 [Cricetulus griseus] | 9.0e-27 |
| aug_v2a.16769.t1 | gi|118150424|ref|NP_001071190.1| | two pore calcium channel protein 2 [Danio rerio] | 8.0e-26 |
Transcript
| Transcript ID | aug_v2a.16769.t1 |
|---|---|
| Definition | - |
>aug_v2a.16769.t1 tagtatcgatcaattcatcacaaggttgacagcaagtctctctggatgtacagatggtattatagcaaacctttgagatg gtgaggaaaagaaatagagaaatttaattccacgataaagaaaaaagaaactagagatgtactgtaaacatatagtggta cctaatgctttgttgaaagtaatgttgccttcagctttgtttgaaagattatccaagatctcattaagcttttaaatcag taggcatgcaggtatattaagttaatttgataatagttattgtcatcattttttggctggcttggggcattttataatta tgcattaattaccacaaccgagagaatatttttccattttgtcaacatacatgtacattaggaggacagagacttggtgt tatgaatttttatgaaatgaagctgaatgatccttgcaaatttttttaatgctgctactaagcagtagtgaatgtggtca tgaaaattcaggtctgaatgaggattcaaaccctgatctctgcgatgccggtggagtgctctaccggttgagctacccgg ccatctgggagctatttgttatgagggtcgattatgagcccttagatgatgtttataggtctgctatatatgatgaattc cagacttaaggcgcaatgacaatggtcgtttgttagaaagaccaagtgccaaatcaaagaaaacattaggagacagagcc ttccaggtagctgctccttcttatggaataagctgctgcggtccgcacgtgatacaacaaacctacaaatccttgaagac tttaccgtaattaagacatttttatttaaggaatcattccagctatcttagtacatctttatctatataattatatttgt agttatcttttattcatttgaatgtaaacattttttagagtataaggaagattgttaattttagttattgataattacta ttgtgatgcacctttgaatattatatagaaaaggcgcaatacaaataataaannnnnnnnnnnnnnnnnnnnnnnnactg cctaattagtgctaaaaaaaactgcaaggatctttcagcttcatttaaatccatgatagtttttctgtggtgtttctttg aatcttccccatcttttgaattattattattatagtgctgctactagattatgttgaggtcataaaataataattaccat attgataccattgcctgggcctggtggaatcacttttgtattttatccttttaggggattttcattggtcatttttctca acctgatgttggcatttgttgaaaaaccttcatctttcacgtaagatattaagattttctaacattcgttttttgcaagc tactgggtattttactgttgatgagccagggactgaaaaaaaaagagacaatcttgaggctcttttcaaaggtttctata ttagctcagtcaacttagtcaacgaaatatcctaaacctagaatgcaaagttctgctcttttattaatatcgctatgatc atatttttaggtccacatctgatcctcgtttccgaggtaaaagaccagatcctccctgtggagtcacagaatgtgtggaa attgtcttccttctgtgttttgtttgtgatttgtttatgaaggtaatttttcttcactatgcaatnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntttgtaaagtgcaaacgat atcatacggattgtttttgttgtagcgcataaggattcgcagagttctgaggcctttcttcttgttgcaaaattcctctc tgatgaaaaaactggtgagtgatgctggttgtttttgcaagcctttgaatagcaaagatcctttctagatattgcaggcc tcagtcatgttgtactgtaaccattttgctaggtgatggtgatctcaaagtaaggggaaaagaagagaactgagaaaaga cggagactgccaagagtctctaattttggcagaaaatgagagagggggtgaaatgcacatgttgtgtgagacttggagta cacacgttgggagggaggtgctgaaaagtagagtactttcaacgcttccctgacattgtgtggcctcagggtctctcctg cgcgtatgaattttgggcgctctgttgtcacccaccaaaacttgagacttcccagtctactctttggtgtataccaatgg aaaacttgcgcacaaggaattctctttttcccaatgaggagcactagatgtgattatgcaacaaggtttcttgaaatgtg atgnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnctttggttttttaaataagtatgtacttcttttcagttaca tgctatcaaacgaactgtacctgaaattctcaggtatggaattaccttactgtgttaatagtagtgatgtttatgaaact caattattgtcgcataaaactgtatgagctatcgcattattttactcatggggtctcatagattagaaatgatgtaagcc aaaccacaaactttgctgtgcatgaacagataagaaacttctgtttcatttcagtgtgctctttcttctgcttttacatc tatggttctttgccatgtgtgggatgctaatgtttccacag |
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Protein
| Protein ID | aug_v2a.16769.t1 |
|---|---|
| Definition | - |
>aug_v2a.16769.t1 MLAFVEKPSSFTSTSDPRFRGKRPDPPCGVTECVEIVFLLCFVCDLFMKRIRIRRVLRPFFLLQNSSLMKKLLHAIKRTV PEILSVLFLLLLHLWFFAMCGMLMFPQ |
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