Gene
| Gene Model ID | aug_v2a.16603 |
|---|---|
| Locus | scaf7858 : 125526 ... 140895 : - |
| To GenomeBrowser | scaf7858:125526..140895 |
| Genes list of scaffold | scaf7858 |
Manual annotation
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| aug_v2a.16603.t1 | gi|589968400|ref|XP_006996689.1| | PREDICTED: A disintegrin and metalloproteinase with thrombospondin motifs 12-like [Peromyscus maniculatus bairdii] | 0.0 |
Transcript
| Transcript ID | aug_v2a.16603.t1 |
|---|---|
| Definition | - |
>aug_v2a.16603.t1 ccataataaaacagaggtattatgcacaaatcctgtccagcaataaatgttgcccaatgcagtgttgtatccataattca gtggtacaaatctgcggcgtgcgcggttcgtctgaaatgcggccgtgctcgttaagcgatttatagcgtgcttgtgttat tgtaaaatcgctccatggctgttcattaggcccactggcagagtttttgtagaggtgaataatgctgctcgtcagcgcaa aggacgaaaggctaacattcgaaacgtcagctctgttatgatccttttagctggagttaaacgggagagtgtttcatttt ccttttcttttccagcttggtttcaaagatacagacggtatttctttcaaactaaacagaatttcggattggtcgaggaa gttcatgagcaagagtgatacagatccagaacactttgatgtattcagctatatcacggagtgggtatttctgcctattt atagacctatgcatcattagcccgggtgatatttgagagaaagaagccctatcttttactgggcatgtagagggtacaac tgcttttatcaactttctaaatactaggacttaatcttatggctccatgggttctttcgtaaatatctagagttcttatt atattcttggaacggatcgaataattatgtaaaaccatgaacgcaacggagctttttccagcaggactgtaacgaatttg ttgtcagatacgtgacctctcggacaaacattgagggagggaaatgtcggcccccagactattgtgacagatacgtttct gatgataatacaggaattttccatgttttttcattccgataccttcttacttgcaaagcactgctcggtccgctaatata ctgataactcagatgatctacataccgtatatttatgtgaatgaatttgatcatcacattttagcgctgcttaagcagcg gcgagaaaggcctgaacgggaattcgaataaaaatttcctgtctttcatttttttctacagcaaaacaggcggaggtaag aacagatttctctgatgccattacctctttcctttcctcagctttcgtttttttcaagctacgattagttgttttcacac cctaccattctcttctttttgctatatttatggctcgcacagattgaacaaattaagcttttcccatgaagttgttagaa gcaagacaagcacagatctggtttgaatactacgactactgcaagcgtggttcaaacatgcattcagtggagttatcgct ggctcaaattccagttacagcttaccctttcactccagtcacatgactgaattgaactattccccgcgacatttttacct tgtctaaacaaagcagacctcatcacgtcccgttcattattgtcacctccttactctattacattatgcctggacactcc actgaactttgtgcacgattttatttcagtttcaggtcttgcccaattaaataaaatatgcaagcccggtaatggcaatc taaaccaagatataggcctacagacagcgtttgcagttgcgcacgaaacgggtcacaagtgagtaaagatttcttggata ataccagtggtaaattaaataagaaaatgacgacaggttgttgagttagggtgattgtcgaaaaagtgaagattatatag agaaatctttgctagggtcctctttctttctctttctccctcttaaccccgggagcgagcgagtatacctcattttcttg tgtcagtaaagtagggcactgaatcgtcactataaagggattgggagtctcctcagaattcgaaagtgacatataataga ggcagcttcagttacagcaagcaagcagttgtcgcaaaagtgtctgatttttgtcagcaatatgagctagttgttcgggc gcggggcttgaaactcgttgatatcacattttgtcccacttaaccaaccagttgttgttctgggtcaactcctttggggc tgtgcttgtaaatagaagtctggggcacgtttctcgaaagttcccaaaacttttagggcccgaaaagtcattcgtagaac tccgactcgcttattctgttaagctggtcttttcatattttgtaaagcgaataaagattaaaataacttcaaagtttcat gcctcgagacgcctttgttttgaagacacaaagagaattatgttacccgaaacgtatcgggactttcaagaaacgagctc ctggtctgcttcccaacagtcaccatatgctcccggccagtttcttttgtttcattgatcctgaaaatctcctttgggaa gctgtcagttgtaatgtaaggatcaagatctctttttcttaccttgtactaagctttgtctttatcgattacatatcttt tcagtttgaacgttggtcatgacagtccctcgaattgccctggtggaccatttataatgtcacccgttactccgtctggt gtgaatgcttctaggtggtcgagctgttctcgagtgaaatttgaaagcatgctcaagtgagtagctgtttttccattttt gacgagattgtatgcataaacaagtgattttggcagtgaacttgctctatgatcaagaagcagctaaagagtacgagagt gtggaaataagggatttttcaagttgacgacaaggatagttatctcctctcgtgctagtttttttttattctctctgatt gctttctttttaactttatgcttattataagatgtgtgtacgggatgctacttaaagaatcgccaaaaaaattggtaagc taagagggttatttttttaagtcatttttttatacgctacctcaatctctttggtacctgccatgtcgaaggcgatatag atccttaatcttgtcgtatccttcgttcatatgtttttcttgatattcgtaagcacttcattgctgaaaatgctgaaaac ttgtgcacgcatgcacaagggaaattttcgggacatagtcccttaattgttgttattctattgtattgtcttttattgtt actcttactttatcataacgctctgcaacccgcatcgagctcatttgtttgatgaagactcccctaccttcaccccacct cggaggtagaaggatacactttcgccattgctcggcgaaattaggagtatcttgtgtgcaggcaagtgtagggagtgccc ttcatacactagcctgcaatcagcctcttccgatgaaatggcgcgttctcgaaatctcgaggcttggtaactagtttctt gtcaccaagcccctacacagctatcttttttcagtttacaaaactgtagatttattaaaacgaaattcggatttctttct gtttcagatcaagaacgacttggacatgtttgaatgacgtaccgtttgatatccttaactacaatctatcctctctttat caagacaaactacctggggaaatatttgatggaaactctcagtgtgaaatgatgtatggggattcttggactatttccag ctatcgacaggtatgttnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn 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ggagctaagtcgtggggcaccggtggctgatggaacgccctgcggcgcacgtcatgtaagaattttattacatttgctca atgttatttatttaatgttacattttgtttgaaggaattccgggttaatgatgcaaagatcgtagactacatttcaaaga gagtcagaagagagggaaaaatactcgcgcatgcgcgaaactcaaacaaagtagccaaaagtagagtctactcgaagtac attttctttggccattacagttgtggctttctacacaagaaggcgacggtgtgctggtgtccattaatatcatccgtccg agtgaaatgtttgtcgctatcaagtagtaaatcgctaccattattagccttcctagactccattttgaatttggtagggt agtgctctgcgcatgtgcacatggtaaaaccacttgaaattcagtcggttagccatttcgatgaggacagacgcaaaata ttacacacttgcgaaagaacaacatgcctggtcaaatttcacgatcagtcgaaaattttttccagtatcgagcaaaagta gccttggccgtggacattttggtgtcgtctccatgcggctatacttacgattaattcgtgtttttactgtctgttcttgt gttcttgtgcgcggggtgatccgtgttttatttgtctgttccctttgacttttattccagtggtgtattggaggcgtttg cgaagacaatgggaagaaaagaatgcctggaggctggtctagttggtccttgtcccacagcacttgtacgcggtcatgtg gtggtggagtgcaatacagaactaggagttgcaacaaccccttgtaagtttttttctcttgttacatcgcagtgtcgcag cgttannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn 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nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnaacttcattttctttgccgctcgctttatcttattccatgaactatcttttgtatctgaga ttacggttgaccaaatttaccgctttgtttaattttaagccggaattttcttcgtggtcgctactcattctggcaccaag ctttgaaaatagccaacgggttgcttcctcgtagtcgaggtctacgtttattttgttgaatcattattgaccaagggcag tcttgctatggaaaattcaatcgtagcgtgtcgtcagagtcaagcaagtgtgagtgtatgtttccccgctcatctgtctc tcttcgaagttagaaactactcgcgtattgattttttgaatttattattttccgtagccttttcgcttgggtcaccatag aattcggtaaccactcgctgtttgccttcttgttgtttcaggttgtactctatactgccgtattggtcgagcggtgtatc caaggggaattgtcgaagatggcacaagatgtcactctgatccaagtaacctcgatgtgtgcattgagggacaatgtcgg gtaggtgcggtgcggagcataagaattgtccaagagagtaaataattacgtgcatgcggatttaaagaactgtcaacttc agcgtcacttgtgattagaaataattataactaaggtcataaaatgatctaattcgttgtataaggtaagttgcagtgct aagtaaattcccaaattatcccatctgagtgttagccctagaaagtgaaatgggtccacacgagtacagagaaaaactct gactagggagggattcgaacccaggactttcggattttgctcctcgttgttccaccgactgagctgcaaggccgggagca aaccgtgggtgttagagatcttatatcacggcatagaagttagtaatttagggttacgtaataaacgctgttcgtgtcgc actgatgctagaatgatctaagtagttgttgctgtaagttaaaacaaaaatttggttttatcaaacgagttgataaaggt tgaattnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn 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tattatagcctcgtgtcatctccttagtccgtcagtctgtgtcttgctcaaggcagttgtaagctagcttggcgggtatt aattatcattgtatttgaatttcagagggttggctgtgattctgttctcgactctaatgcacttgttgatcgatgcggca tttgcggtggcgatggagagtgtgttaaaattcaaggctcttatagcaaaagccacactgtacaaggtaaggctaatgac gacgccaacgccaacgccaaggaaacatgtcactggaagtaaacatttgctgagttgtgactagtttccgattgtctcat cttgttcgtattttacaatgttggagaagtacgctaaaactagactggtatgcgcgctgctaaattaagtgaagggaatt aaagatttccagttttgtgctaaagttgtcttcacaacagcaaatttgataattttacgatgatgttttgcagaggacgg cacgggatttttctaaagttcgtgctgcacgtgcagcacgcttatttttcttcagtctaccaatcaaattcttaatacgt ggcggtgttgctgccgttctgttgtcgatgctcaagctccctaatgaccaaaagaacacgacgactgtaatgatggcagg gatgactacatctattaccatggtaatggctatgttagcctcccatgcatgtaggcgttattatgggactcatgtttcag ctgggaaaggcatgcaatacgaattcccttataacgtctgactgggaggttatggccttgctcaagcatgcaagaataac actgagacagtagttgatgatcgggtaatcgtggagcaatgaatagaaaatagtggagtgcgtaagtatgcgcaatggta atgcatttggcgtgttttcctgtgctctggtctatgcttgtgtactttttgagggccaagtagtttttcttttttgcaga tggcaaagagtaaggagatgtatgtacttttcttgctttcaccagggccagaaaacgcagatcttattgccacacttcct gtgggaacaactgacgttttatttcagatcacgatatctacgcaaaattatctcggtgagagaagctagaatttcgtctc ggctttataattttttggtttattatttttttcatccacttccttccatccacttctcgtctcgttatggtcatttatcg gttctattgttcagcgagtctctctccgcttggtcagctagctcagctacccgactacgcgttttaagtccgtttaaacg gcaacaataggtcacagaggaagttatctcagccagccaagtccattacctagcttgcgagcaagcttgctactcaatcg gctggtaagcccgctgtcacttagnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnc caaaatttgaaaacaaagttgatgtgggtcaaaacatcgtagaaatattacgaagcagctgtttcttcgtgttttttgtt ttctatgaaagaggagcttaagcacgcaacgtttctaagccacggacggcaaccggaagtgatctgttttcatattttac ttgtcttctcagtactgcattcttgttattaagtatcttttcactagcaaatatgattagtttgaaaatctgtaggggac cactatcctagcgggcgaaatgttcactttcaatttccgcccgtggatgaaaaatatggcgtgtgcaaagactgaaaacc ccgggaacatctcaagggatctcaagagttacatgtgatcacccctcgctttgccttttatcctcaggcctacaagcgaa caacggcacgtatctagttggtggccacatgccattgcaaactcaaaccgtaacttctgctggaacaacaataacataca aggaaaaaaatgggaaaccggagttatccttcgcgggaccaacaaatgctgtgttaaaagttgtggtaagatttgtatgc gtagtcaatcagtattcgggaaagtactcatgagcgccaagttagcagctggcgtgaagcaccaagctacctaagcctga ctctgaaagcgtatcgccgacccgcaccgacaactttggaaagtaaattatctggactttgtgtcaagtctgtaacgaaa tttatcctcatcaaactggcaaaaaagttgatgctcttagggtgtttaaaatcttcctctcttccctgttttagttctca attccttctttccaattatatgaaagtggaatatcaatcggtagacgtgatacgaatgaattttttgataatataggtta tgaatattatgtgaactgccgacatacaaatgaaatgaaggtgtgatcatcgcagttatgattgcgattgaagcaatcgc aaagtaagcccgaaaaatggtttttcggacttactttgcgattgcttaaatcgcaatcataactgcaatgatcacatctt catttcataatatagaatgtaggattgtcgcctggaactgtataataggggttcttccattgtaccctttatgattacca ggaaactacatcatctctcacacaggtgccttaaacgtcattacgatcttactttcgtatgttcaaaagtttgatttctt ctttagtacatttttaatcgcggatcaaacgtaggagtggactacaggttcacaaggccatttaaagttggagatgcgaa gatccaataccaatggaagactgagtcatggtcggcctgttctgttacgtgtggacgtggtaaaacaaattgctcaatta gttgtgtttatttgcatttgtcaggagtaaaagtataggttcggagtttaactatatacgttggattttggattgaatga caacgcattgcactaactttataatgaaattgaaagtgttatgattatggttggattgatttgatcgacgtcatttgctt tggtgggcttagattgtattaagtcgatctacaaacgatcgaattggagttaaattaatttatcgcttgtattaagaagg aaagacgaatgtcacggaaatgactcattcatagagcggcgatgaaatgaatgtgagaaccagttgttccatcagtggag tgttagatagcaagaatagtcttaattaatatcaaatcagtttcaacctctttcttgccaggaatccgtacacgttcaat gaggtgtgttacttctgacgaccaatcccctgccagtgacaaggcgtgtactggagtgaacaagccagctgcccaagaac agtgctctccgaagaactgtacttatgagtaagtgtatgacatagcctgttttacgccgtgccagcttgtgattaagtaa ggagtcttcagtcaatgagctaaaactcatttgcctctaatttccnnnnnnnnnnnnnnnnnnnnnnnnnnncgtagatg gctcactactccctggtcggattgcagtaaatcatgcggaaatggaaaacagacgcgtagtgtcgaatgcgttatgtatg tgaaccccacggaatatgtgctcagtaatcaatgttctgaaggcaacaaacctgttgttcctgacacttcaaaatcatgc aacagcttcgtctgctttccaaagtgggatacaaaagaaggactcaatgtaagtaaattgttaattacgaaatcagaggg aagatcactgaaattttttgtatctgttttccaactgcaggagtatagccaggatttgggcagttatgcacattgttcaa aatccccacccacgtcatccccctcccctcccttcccaccaccatttnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnntactgagaatacgaatatggtctattcatggttgtggctttgagaattagtaatgaggaaacgaaagggcgttt gaacagtttgttcattatttctacgtgaatttgaagtttgtatattattgcagggctcgaaataattttcggatagtctc cggtcacgatgaccggccaaattcatttttgctcggtcacgtatcgtttctggccggtcaaatgtatatgatgaattagg ggcccataaacccaaaatgttacgaatttatttcccaagagtcgttgctaagagctataggaagtgggcgaatcccgatg tctgtttcgatgcgcgaattgtaaacaacggctctagttgcatgtcaccaggatttcatatcaaagttccgcaatacaca gcgactcgataaatgacaactgaacagcaggaaccttaaattaatttcattttcaatacgattgaattttgaccggtcaa catgaccggcaagacgaacgtttgaccggtcaaatccacaatcagtccggacaatgtccgttgaccggccgttatttcga gccctgtattgatatttatacgagttgtagatatgttgggttgaatatgtgaagggtgagtcgggacaatgaattgctct ttgatttgacttaaaccttgtactgcacgcgtgccaagaattaaactgagtcagggtcttgaggagaatgtggctgttgc tctcgcttaagtttgaattatatagtcgagtgcctatatttggtgtcaagttaattgaccaagtcaacttccacgatcag tcattgaccaaatttttacgaaattgtctcacctagtttgttacaaggacaacacaatataggttcctttgaatgtgttt gattgccgtg |
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Protein
| Protein ID | aug_v2a.16603.t1 |
|---|---|
| Definition | - |
>aug_v2a.16603.t1 MSKSDTDPEHFDVFSYITDKTGGVSGLAQLNKICKPGNGNLNQDIGLQTAFAVAHETGHNLNVGHDSPSNCPGGPFIMSP VTPSGVNASRWSSCSRVKFESMLKSRTTWTCLNDVPFDILNYNLSSLYQDKLPGEIFDGNSQCEMMYGDSWTISSYRQGV CSKLFCLKNGAELSRGAPVADGTPCGARHWCIGGVCEDNGKKRMPGGWSSWSLSHSTCCTLYCRIGRAVYPRGIVEDGTR CHSDPSNLDVCIEGQCRRVGCDSVLDSNALVDRCGICGGDGECVKIQGSYSKSHTVQGPENADLIATLPVGTTDVLFQIT ISTQNYLGLQANNGTYLVGGHMPLQTQTVTSAGTTITYKEKNGKPELSFAGPTNAVLKVVYIFNRGSNVGVDYRFTRPFK VGDAKIQYQWKTESWSACSVTCGRGIRTRSMRCVTSDDQSPASDKACTGVNKPAAQEQCSPKNCTYEWLTTPWSDCSKSC GNGKQTRSVECVMYVNPTEYVLSNQCSEGNKPVVPDTSKSCNSFVCFPKWDTKEGLNGSK* |
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