Genome browser

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDaug_v2a.16161
Locus scaf7380 : 53756 ... 56220 : +
To GenomeBrowser scaf7380:53756..56220
Genes list of scaffold scaf7380

Manual annotation
Blast Hit to nr / sp
query Subject ID Subject Name evalue
aug_v2a.16161.t1 gi|697828244|ref|XP_009634496.1| PREDICTED: choline transporter-like protein 5 [Egretta garzetta] 8.0e-15
aug_v2a.16161.t1 gi|729728098|ref|XP_010559794.1| PREDICTED: choline transporter-like protein 5 [Haliaeetus leucocephalus] 9.0e-15
aug_v2a.16161.t1 gi|704238893|ref|XP_010159806.1| PREDICTED: choline transporter-like protein 5 [Eurypyga helias] 9.0e-15
aug_v2a.16161.t1 gi|704300405|ref|XP_010162684.1| PREDICTED: choline transporter-like protein 5, partial [Caprimulgus carolinensis] 1.0e-14
aug_v2a.16161.t1 gi|390353346|ref|XP_792938.3| 1.0e-14

Transcript
Transcript IDaug_v2a.16161.t1
Definition-
>aug_v2a.16161.t1
gaagtttgcaatgtcctctaacgttacgaagtgaccttgtcttatttcctttaatctcacgtaaaaagcgtaaaagatct
gatcagagtgtacaaaatcaccatcagttatgggatgttgtggaaaaggcagcgacgatggcagaaatgacaatatggat
atgggagacgcaaaagatggaaaaaatcgcggcggcaaatggggtacgaagtttgttttcttaaaaccgctaactcagtg
tgtgttaagacttcctcatctgaacaagatttttaccagattttcaaaaaaaatgtggaaaaattgtgaatctggacaat
attcattttatgtgacgaatttattttgcattcacctgctctagcgtgtgttaactcatatgacgtttgtgtctgattga
aagatttggaaggcttccttgttcgcggtgttactgtaattaaagtatggttatattgcgttagtttattccactcttcg
tcaagtagttaactgaagttggaatattggaggtgaaaccgtatgtttttggcaaacgcaactggcatcattttgcgtat
ttcttacatctcagttgtcatcccaagaaactttctttaatagacaattttaagccacgagcaaatgatggtagagctga
gatttcatcgcaagtttcatgttgagctaatattaatacctaaattaatagtgaacatgcagttatcttaataagcaagt
ttgatttcttccagtctttgctttacttctatttctttctgcgaagtataggttattgtctgggttgtttattttcgaaa
gaaattgatttatattgtcttcatattagaggcattcttgttctacaggaaattgcttggtttgaaaaaatgtgttatgt
tccaactcgtcgatttgtggggggttgcaaccaatccctgttctaaaagatgatattttccattctttcgatcagtgata
gcgtcagatatagccttgcatcaaaatgccacaagcttctgtttgtgcaaggaacataggaatttgtcactggcatgata
attgccacttcttggtggcacattttggcaaataaaccaacttatcagctaatcaccgcgaaagtgcacgcttgatttac
cactaggctaatgccctagaatgcagacaatgtattttcatccaattattcagacaaaatctgggttgagttgacaatgc
atgggttctataagagtcttacaccagacaaaatagctagctgactttgtgccattaactcggctttgtgtaacggttct
cattctcaccaatttggtatgattctccagttcccagcgattgaacttggatgagggtatagttctctgcagtagataaa
tcaattttcagatcagtgcgtattgaattattctcaatggactattgttataattcagtggagagtgttacccctttaaa
caactgggtctagtctgttctaaataccacttagaggttatttggtcttaggtttggatttcaagttttgcattgatatt
tgtgtacaaaaaaacttggtcaatgcatttttatgctccttgggtgcagggatggcgcagtggtgagagcactcgcctcc
caccaatgtggccagggttcgattccaagatccagcgtcaaatgtgggttgagtttgttggttctctactctgcactgag
aggttttctccgggaactccggtttcccctcttctcaaaaaccaaaaattggacttgattgtgttaattgttaatttgag
ttacagtgtccccaattagtgcttcagcactagaacgactagacacttaaataaagnnnnnnnnnnnnnnnnnnnnnnnt
tcttttatcctctttcttgacctatgtacctctgcctttttcatttctacagtgtttgccccactttgatctgaataaca
tcatttttttttgcaggagctccaaaaccatttgatccaagatttaatggtcccataaagaacaggtgccataatgttct
aaattgctgtttcaaaaatactcagagtaacaccaaatttcaagtttttcagttgtgtagcatttcagttccttaaaagg
tcactagattgtcaaggtattagttattgaaagataagaaaacaaactatattttggcaacccatcgacttttgacacgt
gttacagaacatgaggaaacttgaccattaaagacaactctttgggacaatttaattgacagcaacacaaaggtctcatc
tcttgagatgacaaggttttctagagatgaaaaggaaaaccgcattaagaaaggtcaacttttaagcaaatgatttattg
tgttaatataaacaaaaaggnnnnnnnnnnnnnnnnnnnnnnnncaaatgttacatttctctcatttgcaggagctgtac
agatattatttgctgtatcctctttgttctttacatcgtgggaatgattgctcttgggattattg

Protein
Protein IDaug_v2a.16161.t1
Definition-
>aug_v2a.16161.t1
MGCCGKGSDDGRNDNMDMGDAKDGKNRGGKWGAPKPFDPRFNGPIKNRSCTDIICCILFVLYIVGMIALGII

  • MGU Home
  • Genome Projects
  • Information
  • Genome Browser
  • Blast Search
  • Keyword Search
  • Downloads

Gene ID:



Keyword:



  • Login

copyright © Marine Genomics Unit 2015
Okinawa Institute of Science and Technology
1919-1 Tancha, Onna-son, Kunigami-gun, Okinawa, Japan 904-0495