Genome browser

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDaug_v2a.09309
Locus scaf3555 : 10194 ... 17465 : -
To GenomeBrowser scaf3555:10194..17465
Genes list of scaffold scaf3555

Manual annotation
Blast Hit to nr / sp
query Subject ID Subject Name evalue
aug_v2a.09309.t1 gi|156387892|ref|XP_001634436.1| predicted protein [Nematostella vectensis] 0.0
aug_v2a.09309.t1 gi|390353767|ref|XP_003728187.1| 0.0
aug_v2a.09309.t1 gi|557270415|ref|XP_006020484.1| PREDICTED: vacuolar protein sorting-associated protein 26B [Alligator sinensis] 0.0
aug_v2a.09309.t1 gi|697031457|ref|XP_009577826.1| PREDICTED: vacuolar protein sorting-associated protein 26B [Fulmarus glacialis] 0.0
aug_v2a.09309.t1 gi|667254946|ref|XP_008565360.1| PREDICTED: vacuolar protein sorting-associated protein 26B [Galeopterus variegatus] 0.0

Transcript
Transcript IDaug_v2a.09309.t1
Definition-
>aug_v2a.09309.t1
ctgctgaggtttagtctgcctgcgatggaggctattgtttgcttgcattgaattgcagtcacttacccctccccacagag
gtggtccaacaacgcgagtcacgcgctgttccgtgagagtgaggctgttcaagaggaggaaggccatcttgatagtaatg
cctgtgtagtagttgaacttcaagatggtaggtatcgtcttgtttgatctgagcgatggctgagcaatagaaacactttg
attctgtgtcttttagagtttcttcggatttggacaatcagcggacattgaaattgagctcgctaacgctgaaagccgca
aacaagtggatgtgaagaatgaagatggtaaaaaggagagactgtttctttactacgatggagaatccgtgagtgggaag
gtaggagtatttccgttgctacaacttacttgcatttacttgtggtggtttttcttttccgtgtacaattcaattgaagc
tgatggatcaacaagtcatcattctcttatatttatagcaatttcctacttggaatcgatcaaacacgtaatgattcaac
ttgttcgtgattggaccggaaacaacttcggacctatggctgtacgttatgcctaggacctatttgatcacggataaaaa
gcgacatatcctcgattaatccatcgataatcgatttttctccaatgattaattaatgaaactgatcgagtttgttaaac
tacacccaagtctcttgcacacctatctagaactgggtagggttttatcaaattttgttcggcgttaagttgtagtaata
ggtaatgaagagtaataataattttgttcttacttgggattgtacacgtgggtgtgtcaaggaacgtggggaagaatgga
ggcagatgttcagtagggtagatgagatgttataaagcagaatcctttcacaatttgatttactgtgactgaaagtgaac
tgtactcatcttaactattattgaagtgactgtgattgctttgtcttatgggagggattcctcaaaatctgttaatacga
tggctggtttagataaaaccaccactctgggaatgttatccctatgctttgtcaacagtgtgcttgttgtttaacttcct
gcaatttatcgtcctgagtttgagtttgattaccagccgcaaaatttattatgcaaagtaactaattgttgttaaatttc
tccaaggtaaagctaatacataattgaaaattttccattctggatgaagaatctgatcttctttgttatgggctgtattg
tgtttcggcccaattaatcaactattgtcatgtcttaaatgccttgaactttctactcacatgtatgtccatttagtaat
tttttagctcaggataatgattttccagctttgtgattggttccctaggcccctgatatgagccattatcnnnnnnnnnn
nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
nnnaatgagaggtaattcattttgtgctgtagtttatttttgcagatttgccagagttactcatgatcttagattccttt
tggtcagaatgatttaaaatactgtgcatcaattcaaccccaacccccctccatatctgggcacttgtacctgtatattt
tcaaaaaagtagcatgtagagtatgttacttcttcaagtacagtataaaactatactgagctgcaaatcccttaagttat
gttgctccacattaattaattaccaggaaccttgaaaaaaggttgatgaaatagggaagtgcaattagctattgagctag
ttcacaggaacccaatttgatattgtgaaagaaaccattcaaatgtaacaatatgaggtaaggaagctctaccggtggaa
gacaaccttttgatttctacaaagcatgggagaattgaattcaaggccactgaatcatgcaaccagtggtcagaatgtga
tttgaacctggaacaagnnnnnnnnnnnnnnnnnnnnnnnggatcattgggtaatgcagttcaagacttttcattgtctt
agccattatgttatatgagccaatataccatagtctcctagtatggtaagtgtacacttcaccttaaatttaaaagggag
cttaaaaaattttccctcaagaaacaatggtggccggcaaaaattgcttcacactggagttgaatgaaaaggaagtcatt
gaaccattagaaaatgcaacaccaggtagcataaagaaagcctcaaaatatggcatgaaaatatacatatcaaggaaaaa
attgaaaactttattttgacaatgtaagcatctgtgtcagtcaaagcaaaacaatgcaagttgagacaatttacacatat
aaaatgatctgtatgttgtccgtccggattcttctcacaaaataaagttgagaagatttgtctaatatcttgggggtgtt
tttatttaaacaattattccactcacgcttgttggatatgagatggttatagccaactcagctctatgcgccttgttggc
tatctatcatctcatatccaaagcacgctcatggaataattattaattatattacattatgcaaatttagcaccctgacc
tccacagcatgctgccatctggctccttgatcactaaatggtcccccacttaagagtaaaatcatgtagcattagtcata
gtgcatctctgactgtcctttggccaggaaagtattgagaggcacttcattttacttcacatttttccattataattttg
accaaaaaagttcctcnnnnnnnnnnnnnnnnnnnnnncagtatcaagatggaagttggtattgaagattgtctacacat
agagtttgaatacaacaaatcaaagtacgtacatggccaattaacactagtcttattaaacactcctggtgtattttgcc
acctgtgacaggccaaggagaatgtactgctggaaggggtcatgattttgtaactggattgactagaatggggttgcatt
ttcaagaaagctagtatgatgatcttgcacatttttgtaattctgcttgattgcttgacatggcatgtgacttttgcgtg
accacaatattattattattcatagtatcatctacttttatgtccatttttaggtatcacttgaaagatgttattgtcgg
caagatttatttccttcttgtgcgcatcaagatcaagcacatggagttagcgatcataaagagggaaactacgggaacag
gtaagaagtgtgcagtaccatagtcagtttggaggctgacaaattcttgctgactgatataattataacagtgtaaatgt
ctactactagatcctcttcactgtaaattgatgatcggcagatttgttagcagtggctcttattgtctcattgaaaacaa
tagactaaacaactgcagccgtgatttggtgttgtagcagcttgtctattgtttttaagtccaactcatagtttctgttt
tagtcttttatgtagggtttaagtaatgaaccaatacaactgcatgtagctgtccatttgtttttggtccaagttcatac
ttccctggccgagaatccaagatacgtcatgcaacaagtgaaaaaaaaaggagacaaaagtcataaaaaatgtattcttg
ggcgacaagcaagaaacgcaaacattgtcgtggatttctcttggggtgctatttttcccctcccataaaaaaaggacgaa
gaaatgaagataaaagtgaaaatgaagagcactggcatcagtggtctgattgcttggtgaattatccacctgtgtttata
agggtgctaaggcgttttccagacgttacaggtcgttggaatcttttgtttgcttttaagtggaggctattttgtctgtt
ccgttgatcctattgagagccttgttgtgtttgacttcggtgtgtggaaaaaaatcgcttcacaccggagttgaatgaaa
aggaagtcattgaactattagaaaatgcaacaccagggagcataaagaaagcctcaaaatatggcatgaaaatagatcaa
ggaaaaattgaaaactttattttgacattgtaagcatccgtgtcagtcaaagcaaaacaatgcttgttgagacaattgac
acatttaaaaatgatctgtacgttgcccatccattctcacaaaataaagtcaagaagatttgtctaatatcttgggggtg
tttttattaaaacaattattccactcgcgcttgttggatatgagattattatacgtagccaactcagctctatgcgcctt
cggtgtgtgactaagtccatgcttttctctttaggtcctaacacttacaacgaaaatgaaactattgccaaatatgaaat
catggatggtgctcctgtcagaggtaaaagcgcttaccatttttagttttgattaattagccatttccataaagaggcag
aagcaaattcttgatatgcaaagaagtacagtccatcattttgcggtattagcgatttctggaaaggctactgcccattt
tatcaaatggaaaatttaaagtgggaccttgcatttggatggcagccattgctcggtagcaagtcagaacggcatgcctt
ctctaaccgacttatttgtatgattccggaagttccagagtagtcccacaagttttgatcaaatgcaagattgcccataa
aattattgttatttcgatcgttttcaggcgagtccattcctatcagactgtttttagcgggctatgaattgacaccaacg
ttcaaagatgtgaacaagaagttttctgtgagatactttctcaatcttgttctggttgacgaggaagaaaggagatactt
caaacagcaggtactttaattttgtactaccatgtttgctcgtgtattgccatgtgtactcaggtattgctatgtattgc
catgtatcaccatgcatacacttgcatactggctcaacgatccgctaggtaaggctctgggaacgaaattgtgtttcctt
cgcaatttggcaagattgcacggaatcgcacctgcagagctttgctttgaggataggttacgtttctgcagaaagtgtga
tgcagcgtcggtgtgggtgtgaagttgagagaggtaaaattttaccaccgtgaagggatcacaaactagacgtttcgagc
tttagccttttgtaagagcaaattaacgacggggtaacgctcgtaatatctttacaatggcaatttgacccttgtttccc
actaggaaggtacgtggaaaaagtaatcagtttaatcatatgctgtgttcctcatctcgacatcccattggttgtgagaa
atgatacaaatacacatttatttgtgctgtgtaggaagtcatattatggagaaaaggagacttgaagaaaaagcccggta
ttttgacagagaaactgaggcactccagggaggaaagcaagcctgaagacgcggaagaatagaaacgatagtgcaatcca
aaacatatgaaccaatagagttgaaaaatctcagcagatttgaattaacattagaaggtcactgccctgtatcacatttc
gaaaggtatttcgtttacctggatgagttagaccattcagaccccgactcgtttgtaccctttgggttttaagcattgaa
tatcaatgtctgtctttttcattgtttggaactgtatgaagcaatgcgagagtcattcagcgagtatgtggcttacggta
aactagaaactgcaacctgtttgcaatagagactgtcagaatttcatgtacttacttttcccctggtttgaaatttcgct
ctttattttttgctaacagacatcaaattcgtggaaatccatcaaattttagaataattaaaacaaaaaccaccaaaaat
tgatgatgaaaagtggcagctgtatttccaatgttaattctattttactggcgtaccgtcttggtggttgtcagttctag
cgccgaagcagttgtagtgtctatggcagaaccaaatttttacaagaaaggttttaaaaaaataacgaattttgtcgtcg
tcacaaacttcacttttttttcttcatcattgatgcaaatttgcgcctcattattaaaaaagaatagtcttt

Protein
Protein IDaug_v2a.09309.t1
Definition-
>aug_v2a.09309.t1
MSFFGFGQSADIEIELANAESRKQVDVKNEDGKKERLFLYYDGESVSGKMEVGIEDCLHIEFEYNKSKYHLKDVIVGKIY
FLLVRIKIKHMELAIIKRETTGTGPNTYNENETIAKYEIMDGAPVRGESIPIRLFLAGYELTPTFKDVNKKFSVRYFLNL
VLVDEEERRYFKQQEVILWRKGDLKKKPGILTEKLRHSREESKPEDAEE*

  • MGU Home
  • Genome Projects
  • Information
  • Genome Browser
  • Blast Search
  • Keyword Search
  • Downloads

Gene ID:



Keyword:



  • Login

copyright © Marine Genomics Unit 2015
Okinawa Institute of Science and Technology
1919-1 Tancha, Onna-son, Kunigami-gun, Okinawa, Japan 904-0495