Gene
| Gene Model ID | aug_v2a.08296 |
|---|---|
| Locus | scaf3174 : 78356 ... 84558 : + |
| To GenomeBrowser | scaf3174:78356..84558 |
| Genes list of scaffold | scaf3174 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| proline dehydrogenase mitochondrial-like | GO:0044710 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| aug_v2a.08296.t1 | gi|156374968|ref|XP_001629855.1| | predicted protein [Nematostella vectensis] | 0.0 |
| aug_v2a.08296.t1 | gi|449677963|ref|XP_002165083.2| | 0.0 | |
| aug_v2a.08296.t1 | gi|410904226|ref|XP_003965593.1| | PREDICTED: proline dehydrogenase 1, mitochondrial-like isoform X1 [Takifugu rubripes] | 0.0 |
| aug_v2a.08296.t1 | gi|688604431|ref|XP_005161051.2| | PREDICTED: proline dehydrogenase 1, mitochondrial isoform X1 [Danio rerio] | 0.0 |
| aug_v2a.08296.t1 | gi|583987433|ref|XP_006788947.1| | PREDICTED: proline dehydrogenase 1, mitochondrial-like [Neolamprologus brichardi] | 0.0 |
Transcript
| Transcript ID | aug_v2a.08296.t1 |
|---|---|
| Definition | - |
>aug_v2a.08296.t1 tccaactcgcgcgaaaatgcacgcgagcaaacgccactaggtgatcgcttgttcgagcgcattttgttcagctatcaaaa tggcgaggaaacttgcttttaccaaggcactgaaattcgaatttccttacatcagagaacaaacaacgttggctcgatcg tttcttgtaagaagagcgagttcttcaacagttgcggaagcttcaagctcagaatcattgtcgcctgtaaaaacgaatga ctcgcattctgctggttcgcgatcgcctcgatccacgtttcttcctgggttttctttcgacgattcgaagaacgcttatc gctcaaaaacaagtttggagattgttagagccctggtggtcttcagactatgctccttcgattttcttgtcaacaaaaat aaagaggtaaagtagtttcgatgagccagacgcataattatttatcgcgaggagggtacgaaggttggttatcttacgta acaatcgcagacactcgtggaacaaacaccggtttacctcgacctgatttcgcttaacgtaaatttctgcaagtctcagg gctcaaaatttcgataaattctcccagaatgtaatatctactttcttttgtctgttgcaacgcgactatttgtttgttta caaatatattggctcgtgtcgcgtgactgtcacgaagtcttttcgtttcgctttgtttcgaaactcggcccagcaaattc tattgccactttaatttcgaaatttttactctatttaaccaaactgtttcatttcctcaacatattacgcaacggatatt tttttctaccaagaatattattacattatggaatttgatattttggtcaactactctcctcgctcttctaatttgtttcg acagctttccccaccgaaaagttacaatgcgtttataatgttttgaattccttacaacggtacttatttaatcgatcacg tgatgaaatgccagtatgtacatactattaaaaattggcaatacaaagagctgttgactgtaatgataaatggaatattg tacaagaagtgtatagaagcagaactttgtcctgttatctttattccattgcagttgtttcgtgataaatgattattctt cactgttggggaagtagtcaattgatactggattaacaggctaagctggggcagatctaggggaggggtgcagggggatg caccccacccttttagatgaactgcagctttctaaaataagtagaattcagtatttctgaattaaaaaaaaaaaacatga gacgagcttgaagtcatttcttagtggcgcaccccttcccaagaaaatcctgggtccgcctctgcctagtgcttcagacc tgtcgagaggtgaagaagactttgagacaggcgcagcaacaagagagtacggttatcattcacttgaaggaattgtgatt aaatgattattgtaaatgtctcactcaagcagttttctccacttacagctgaagtattttaaggatcacttggacagtaa atttattttgaaatcttacttcttacattcacaataatacgttctctttctttgtttgtacagctacttgacattggcca aataattcttggcaagcgcttgtttaggaaattgatgaaacaaactttttatggacactttgtggctggagaggaccagg aatccattaaaccggtgataaaatgtctggaacggtttggtgtaggagcaattcttgattactctgtggaggaagacttg tcagagtgtgaaacccagagtcacatgagcaagaatactgatgagttgtctgatcctgctgatgaatacgcccgttataa acctcatgttgaatttgcggaccgaagaaagggagtttatggtgccagaacatatttttatgaaggcgaagaggagtgtg ataaaagaatggagacatttttgaaatgcatagatgcagcaggtaaggatgtggaagggttatgtttaagccagtaacaa tgccaatcattgaaataattaatatccatccagcacaaaattcctagaggcagttctattaattttatacaaattaaatt ctgattaggtatcaaaattcccttagaaatcatcagctaatttccttttaaatgggatgtattcctttttaacttcaggt gctgcatcaagtgatggctttgctgccataaaggtgacagcactgggaagaccacagatgcttgtatgttaagtatttcc tggaaaattgtttttttttcccttcttttttttaatattataacacaataataagagaaatgattgatgtaaggatggtt gcttgaaaaggggtgaaggaagagatgtggcaattccagaaagatttcacagttccaggtaggaatcagacccatgaccc ccataatgccactcagacccagctcaccaggagttctcttagctgaatggttaaagcatcagactggtgctacagaggat tagattcaattcatacttgtgactcnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnttacaggtacatttgaacttgactactcacaatactaacactacattatttagaatatgatgatatc actcaactttccagttcttacttcaacccttgccctacaaccatcattttatcattgcctgtagaccattccatcaatcc ttcaaagaaaaatgattctaaagtatctttattctaacaataactcaaggacaggctggtttgatgtaactttgaaaatt gaattgttaatttatttcagattagaatttctgaaatattaaatcagacccagtacttctttgattgcctggcctcagat tctgtaaagctgaacaagattggtaacattgtcgccagagacaagttcttagaaggccttcaaaggcttggggtatgaat aataaattgcaccgagggcctatacaacctaaacctttttcccctaaaggttagagatgtgtccaggattacactcaatt ggatgcatgccaatatcaataggggcagaaaagtgtccactcacacttcttgttaacttcacaatcacttctggccagaa atatggacaaaaaggccataaagtgtcctgctaattctgctcctcagaggaaaacgcagtaaccccaaacctaaccctgc acaaagaaactaaccctaatgtgaaaaaaagagtttactcaaagacttcattggacacttaaatctgcttaggnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnctaactcaccactattattacattaatcatgggttatttctttccttaatta catctttacagacaagtagagcactcaattccacttgccattaatttgctaattcgagtttaattttcccccaacaccga aaataatcaggacatcctctttcataaactgtcaaacaatgaattgcaggttgctcttagggctgcttggtaaatgaatc atctgtctcagaaagcaaagtttcttttcaataatcttaagatgagctgacaaaggttaagaattatgaccctaggataa tccaaacataatataaaatcagtagctttcaataattgaaattattgcagtatttacatgtatttagtggtaagtgattt gtttaaattggatacaggttgagatgaatcctgacgatgctaacagaatatttgatttgattgacaccaacaaatctggg taaagaaaataaaactgcaatttccttctttttaatgtgtgcaacattgaaaataataaaaaaatacagtcatattaaaa tttggatttctgtcatttctttgtagtgatattgatatcatagagtggcatgaattcttgacaccacaactcaaattgtc acagcttttcaaagccaaacctgaggaagatgtaagctattaataatactaannnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nngtaatgagagtctcaataaatcattattgatttagcatgctgtggaaaaaggagtacggctcatggtagatgcagaac aaacatatttccagccagccatcagacacctgacacttgagttaatgagagagttcaacaaggagacaccacttgttctc aacacataccagtgttatttgaaggtaaatcaagaacaaagtgaaagtcagaaaagtaaaagagttctgaatgcttctgg tctggcgagagagctttcacaaaaaacttgctgcaggtggggtgggaagactgctgagaaactgcatttcaaacaattct aggatgcatactgcacttgcttcattaaacattttcagggacc |
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Protein
| Protein ID | aug_v2a.08296.t1 |
|---|---|
| Definition | - |
>aug_v2a.08296.t1 MARKLAFTKALKFEFPYIREQTTLARSFLVRRASSSTVAEASSSESLSPVKTNDSHSAGSRSPRSTFLPGFSFDDSKNAY RSKTSLEIVRALVVFRLCSFDFLVNKNKELLDIGQIILGKRLFRKLMKQTFYGHFVAGEDQESIKPVIKCLERFGVGAIL DYSVEEDLSECETQSHMSKNTDELSDPADEYARYKPHVEFADRRKGVYGARTYFYEGEEECDKRMETFLKCIDAAGAASS DGFAAIKVTALGRPQMLIRISEILNQTQYFFDCLASDSVKLNKIGNIVARDKFLEGLQRLGVEMNPDDANRIFDLIDTNK SGDIDIIEWHEFLTPQLKLSQLFKAKPEEDHAVEKGVRLMVDAEQTYFQPAIRHLTLELMREFNKETPLVLNTYQCYLKV NQEQSESQKSKRVLNASGLARELSQKTCCRWGGKTAEKLHFKQF* |
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