Gene
| Gene Model ID | aug_v2a.06035 |
|---|---|
| Locus | scaf2219 : 349 ... 1035 : - |
| To GenomeBrowser | scaf2219:349..1035 |
| Genes list of scaffold | scaf2219 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| collagen triple helix repeat protein | GO:0005618 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| aug_v2a.06035.t1 | gi|71910590|ref|YP_282140.1| | 1.0e-08 | |
| aug_v2a.06035.t1 | gi|15675046|ref|NP_269220.1| | 4.0e-08 | |
| aug_v2a.06035.t1 | gi|585299448|ref|YP_009001021.1| | collagen triple helix repeat protein [Pithovirus sibericum] | 1.0e-06 |
| aug_v2a.06035.t1 | gi|391342834|ref|XP_003745720.1| | PREDICTED: uncharacterized protein LOC100902465 [Metaseiulus occidentalis] | 2.0e-06 |
| aug_v2a.06035.t1 | gi|242016912|ref|XP_002428939.1| | collagen alpha chain, type IV, putative [Pediculus humanus corporis] | 3.0e-06 |
Transcript
| Transcript ID | aug_v2a.06035.t1 |
|---|---|
| Definition | - |
>aug_v2a.06035.t1 ttgccggttgtgaatctgcttccttaagatgcactaaatacatctgctttttcaaacattactcacgttgcttcacagca tagcagcttcacagaacgacagcatggctagtcttacagcattctgcgttcagggacctcaaggaggaaacggcatgccg ggtaaaaatggaacaccagggcgtgatgggaaggatggaatgcctggaagagacggtgagcaggcagtagtgatttctct tgctttgaagcagagatttgcttcgagagctaaggagcttctagttgatgaattaacaaccacttataggtgacgtaacg agaactttcgttataactcacgcttatctgtgttctctacataacgtcgactacatgtggagagattttgatcactttcc atattaaaatcaaagttctaatctatagctaaagctataaacgagaattttaataacataagatcatcacagagaaaatg ccgaggtgccacagacttgggttcaaacacaatacacagtcaagcatgtgacctgtttattgggtaacccaagcgtgtca actggactaccagtgtgaattgcacgtgatatagatatcgtgtttattagtgcaggaagggatggcaccgatggacgtga cggaataccaggggtaaacggaatcccagggaggcatggatcaccgg |
|
Protein
| Protein ID | aug_v2a.06035.t1 |
|---|---|
| Definition | - |
>aug_v2a.06035.t1 MASLTAFCVQGPQGGNGMPGKNGTPGRDGKDGMPGRDGRDGTDGRDGIPGVNGIPGRHGSP |
|