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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDaug_v2a.04435
Locus scaf1635 : 127242 ... 128244 : +
To GenomeBrowser scaf1635:127242..128244
Genes list of scaffold scaf1635

Manual annotation
Annotation by Blast2GO
Annotation GO
nk1 transcription factor-related protein 2 GO:0005634 GO:0006355 GO:0043565 GO:0044699

Blast Hit to nr / sp
query Subject ID Subject Name evalue
aug_v2a.04435.t1 gi|49903181|gb|AAH76418.1| Nkx1.2la protein [Danio rerio] 9.0e-21
aug_v2a.04435.t1 gi|744604077|ref|XP_010991584.1| PREDICTED: NK1 transcription factor-related protein 2 [Camelus dromedarius] 1.0e-20

Transcript
Transcript IDaug_v2a.04435.t1
Definition-
>aug_v2a.04435.t1
ttggttttataaccttgcttcggaattcagcttcctttactaggacaaatcgaagaaaggatggcgtcgtttactattga
cgccattttggggatatctgcgcaaatatcagaagagtcaagtcatttggaagcgaggctgaatgcagtcaatgaatttc
aaattggtggaagaggtaggctgaaagatctcttctgagattcctccgtaatcaacttgtgagatatcagaaaggtaact
ccatgactaattcagtcaagctttgctattgcagaagttgacgaaaactgtgctcgtttggacgaagacaagacagacat
tttggatgatggagtaaatgagagtcgtgcaaaaagtgaaacaaaatccctgggcgaggactttcaagatcacgagagtc
cctcttacatcaataaaatgcgaagaagacgtacagctttcacttgtactcaacttaaatctctggaggaaaagtttcga
ggcaagaaatatttgacaatcacggaaagaaacaatttggcaaaaggacttaatctaacagacactcaagtgaaaacatg
gtttcagaacagaagaacaaagtggaaaaaacagatggcgccggattttgagaccagtttgccatggggagagatgaact
caatcattaatccccttcaattgcgctttccgtgtaatgcgggagaattgaaacctcggttgccctcctcagtgccaatc
ggctatggttctatgcctacttttcatccgtcgtcaaatcttcaagtggtctattcgaacatgtccctacatccattctc
gcctagttacaattttactggttaatattggtgcaggttttctctaaacgtccttgagatttaagcatcatttttctcat
ggcgagaatgaacgtgatgttttccacattttcgcagcgtgagaaaccttgtttttgagcaactgttacgtccttggaaa
cttggaaacgaacaagtgtttcaactgatttcttaacggaaaa

Protein
Protein IDaug_v2a.04435.t1
Definition-
>aug_v2a.04435.t1
MASFTIDAILGISAQISEESSHLEARLNAVNEFQIGGREVDENCARLDEDKTDILDDGVNESRAKSETKSLGEDFQDHES
PSYINKMRRRRTAFTCTQLKSLEEKFRGKKYLTITERNNLAKGLNLTDTQVKTWFQNRRTKWKKQMAPDFETSLPWGEMN
SIINPLQLRFPCNAGELKPRLPSSVPIGYGSMPTFHPSSNLQVVYSNMSLHPFSPSYNFTG*

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