Gene
| Gene Model ID | aug_v2a.04428 |
|---|---|
| Locus | scaf1635 : 67241 ... 70685 : - |
| To GenomeBrowser | scaf1635:67241..70685 |
| Genes list of scaffold | scaf1635 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| ribosomal rna small subunit methyltransferase nep1 | GO:0000179 GO:0000462 GO:0001824 GO:0004809 GO:0005730 GO:0008172 GO:0008174 GO:0008425 GO:0008650 GO:0008988 GO:0009008 GO:0009019 GO:0009383 GO:0016205 GO:0016279 GO:0016428 GO:0016435 GO:0017126 GO:0018423 GO:0018707 GO:0019702 GO:0019843 GO:0030792 GO:0032040 GO:0034541 GO:0034807 GO:0034931 GO:0034933 GO:0043770 GO:0043776 GO:0043777 GO:0043780 GO:0043782 GO:0043791 GO:0043803 GO:0043827 GO:0043833 GO:0043834 GO:0043851 GO:0043852 GO:0044822 GO:0051994 GO:0052624 GO:0052665 GO:0052666 GO:0052667 GO:0052735 GO:0070037 GO:0070475 GO:0070677 GO:0071424 GO:0080012 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| aug_v2a.04428.t1 | gi|156384150|ref|XP_001633194.1| | predicted protein [Nematostella vectensis] | 0.0 |
| aug_v2a.04428.t1 | gi|340370652|ref|XP_003383860.1| | PREDICTED: ribosomal RNA small subunit methyltransferase NEP1-like [Amphimedon queenslandica] | 0.0 |
| aug_v2a.04428.t1 | gi|196011754|ref|XP_002115740.1| | hypothetical protein TRIADDRAFT_30169 [Trichoplax adhaerens] | 0.0 |
| aug_v2a.04428.t1 | gi|676447970|ref|XP_009051582.1| | hypothetical protein LOTGIDRAFT_208870 [Lottia gigantea] | 0.0 |
| aug_v2a.04428.t1 | gi|512941114|ref|XP_004909545.1| | 0.0 |
Transcript
| Transcript ID | aug_v2a.04428.t1 |
|---|---|
| Definition | - |
>aug_v2a.04428.t1 nnnnnnnnncctgttatcagtttggtttccagtcctctcagtcttagtccattgacttcagggaacctagcctccttggg taactcacgtgcaagatggcggacgaagaaagtgaatttgaaagacctcgcaaaatccctagaacgctgcaagaaaagga cagtggaaaacggcttattctgattcttgaaaaagcttctttagagacagttaaggtatttcaataagtacatgttattc gtctacggctgtttctatagtactatcaattcattgtcgtccaacgccaccatgtaaagagatctgaaatccacttgaat cggcttgaatgcgcatgtgcacacaaacatgttttaatgaaagatttttgaatgtatctgttcttttccttcatcaactg atgcaaatattttttttgcttttttgtagaatggaaagaattttgagttgttgaattgtgatcgacacaaaacgatgatg aaaaagtttaagagagacccagctctttccaggccagatattgctcatcaggtaagcttagcgaagaccgtataacctga aggtatccaagaattaggaaataaccctggtgcataaatatttatccttgccttgagcgtcacggttttgtcaccataat cttgtctcttcactctagacctctttcataatggcgatcaaatttaatattcttctgttttaatgcaaataagccttatt agcctcactgccatgggcaaaattcgaaagaatatttcaaccaaagtgaggccagaaggtctaattaacataaatacaaa tgaataacaaaatgcgcggccatttatgaaagtggtctatagattatctcacttttcccatattannnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntgaagtcctgactttttcaggcttctgtacgcaattg cttaaattgcgttcataactgcgatgatcatacctcatttgttttcccatattgtttccagtgcctgttaatgttgttgg acagtcctctgaataaagcaggacttttgcaagtctatgttcacacagagagaaacgttctcatagagatcaaccctcac accaggattccaagaacatttgatcgtttttgtggtctaatgggtaagtcaaattggagtcagtgatcaaaaatgtaata agtagtattgataatttccttcagatcaaaagcattgacagaaaataataatattagtaaggaaccttaagaagatgtat agtcacctgatccctatgtgtgcctcatatttctctacaactcaatactgacagtaaactaagtgcatgattaattcttg tctgtagctctttgttttaaacaagtggtgagcttgtgtgataagttgcttttttcaatttgtttgtttgtttgtttttt taattaaatatgccagaaaaggtatccgtccatgttgagaggttttggagaagaaagatacacattcttgtgaactgtcg tagaaagacagctagtcaagcaccagttttccacttctagatctgtagcttaaaaagacagnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnggtaggcgagattataatgctgagaggttatatgaccgtgtaatagctgta tttaaatacgaaaatctgttgacagtggtctggttgggttttgaacttcttcccttttctttcctagtgtaataatagga tggtattgttttctttttctacacttgtttacagttcagttgttgcacaagttgagcattcatgctgcaaatggacctga gaagttattaaaggttgataaaagctatgtttttcttgttgtcgctgcactagattatcaaaaatcaatcattaataatt agttcctgttatcccaaatggatatggatttctgtcagtgaatattattattacagtccaacagttaatcatggatttct gaatgtttttttctcaatgaatattatgtctaagttgcttaaaaggaataatttcagtaaaatattgtgaactattttga attagtattttttcatttcttgtcaggttatcaaaaatccagttacagaccatttgccaactggctgtcgaaaaattggt gagttttgggaaaaagctacatgtccttcatgnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn ttattattctggtagctgctggtggcttttgtattcaggccaagacaaggaactcatgtgatcaataccttccactgggc accaaggcatcaagattatgtgttatgccctagatgttgctctttatgaacttaagtgggtggttttttttggttttttt cattacaaagtgctgtttggaaaaataaactctatgttttcgtgctagtcagtgaaaaggtttctaataaaatatgagaa cttga |
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Protein
| Protein ID | aug_v2a.04428.t1 |
|---|---|
| Definition | - |
>aug_v2a.04428.t1 MADEESEFERPRKIPRTLQEKDSGKRLILILEKASLETVKNGKNFELLNCDRHKTMMKKFKRDPALSRPDIAHQCLLMLL DSPLNKAGLLQVYVHTERNVLIEINPHTRIPRTFDRFCGLMVQLLHKLSIHAANGPEKLLKVIKNPVTDHLPTGCRKIAA GGFCIQAKTRNSCDQYLPLGTKASRLCVMP* |
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