Gene
| Gene Model ID | aug_v2a.02425 |
|---|---|
| Locus | scaf795 : 21146 ... 24530 : - |
| To GenomeBrowser | scaf795:21146..24530 |
| Genes list of scaffold | scaf795 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| mitochondrial ribosomal protein l12 | GO:0005840 GO:0010467 GO:0034645 GO:0044238 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| aug_v2a.02425.t1 | gi|156366833|ref|XP_001627126.1| | predicted protein [Nematostella vectensis] | 0.0 |
| aug_v2a.02425.t1 | gi|432868148|ref|XP_004071435.1| | PREDICTED: 39S ribosomal protein L12, mitochondrial isoform X1 [Oryzias latipes] | 0.0 |
| aug_v2a.02425.t1 | gi|55742214|ref|NP_001006886.1| | 39S ribosomal protein L12, mitochondrial [Xenopus (Silurana) tropicalis] | 1.4013e-45 |
| aug_v2a.02425.t1 | gi|89273426|emb|CAJ82102.1| | mitochondrial ribosomal protein [Xenopus (Silurana) tropicalis] | 1.4013e-45 |
| aug_v2a.02425.t1 | gi|736246394|ref|XP_010786612.1| | PREDICTED: 39S ribosomal protein L12, mitochondrial [Notothenia coriiceps] | 1.4013e-45 |
Transcript
| Transcript ID | aug_v2a.02425.t1 |
|---|---|
| Definition | - |
>aug_v2a.02425.t1 tttcgatatattcaatatggcgtcaagaactgggttcagatcgttgagacttttagcatcttcaaaagcgcgatcataca gtaatttaaggtgcaatctgtctcttctcccccagaaaagatccgttatgtcgtcaatgatgtaactgtaacgtttattt gcagatacacatggcgcgcatcaatccaaagatggcaggtttgtgcaggctgcatgcggcatgattccaccctagcagct ccttctccagacaactcggcgaaagaatatccggaaaagatcagaggcattgttgatgaaatttctaaactaactctctt ggaagtttctgacttgaatgaattgctgaaggtaaaacaaattgtcttgtttggataaactactctttttaaagcgttgt aactttatccaaacatgaattacagaaaaaaaaatgtacctgaaaaacctcatatctgaaattttgggaggactcgtctt tctccaccaagaagacacggctctggtcaattcgcctctaagagctcgaattttttcggctaactacctgttgacaaaat gattgatatcaatcataggtgaaaacatgtactattagacaacatctgcaggagaaggcatatatataatagaataaatg aatttcatacattagaactatggattgaaaggaaagtgtatgagcctcaaagttttgcattgaaggaaattgatcctaac tataagagaaaaactgtctaaatactcttaactattttaatgttcatgtccccaaaactagttgagagaagtgtggaatt gattgcatcagtttttagctttgaccattcttgcttcttcattatgcttaataaggaagaaatttgtctgcaagatcaaa tgaatctggctctctaactgcagttgttgtgcaaaccagcctttgtgcagggatggactgtcattttgactgtattcaaa attttgtgacaaccaatccaaaaccccaccactttcatgttataactaagttgccttagaaaccaacaggctttgtcata atttgatgactacagagcggtgggcgtaggtaccataaatatctcccagctagttacttgaggaagtgaaatggtgacaa aaatttgattttttacatttgcattgtgcttatcaatatatatacatatacatgatttatgttgttgcatataaatgaaa ttcaagaagtaagttggtaataaccataaacacatctttcataaacacataataaccataaacacatctttcagacgaca cttaaaatagaagctgctccaatgatgccgatgatgggggcaatgtcgacagctggtgctccatctcaggtgtgttcacc ttattgatgctcttagggatttcattgacaagatgttatgagagaaatattgcatgtctcaacaaataatattactgtct ttgcatagacttgtggcagttgctatgcttcactccttttttttctttcaggaggtagaagtggaagaagggaaagaaga accaacagagttcacaattaaacttataaaatttgatgctgccaacaaagtcaagctcattaaggaaatcaagaatatgg tacccggactcaacttggttcaggtttgttgacatggtgtactctttgtcattacttacatacatacatannnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnng gttggtgcttgtgtttgtttttggggtaggattatggttaactttgtcttgaatttagccttgtaaactttgtcgagact ccaggatttaacctcattacttcctgaccatcttttcttttttattaatgactccttttcaggccaaaaagtttgtcgaa gatctcccacaaaatgtaaaagagaaagcaagcaaagaagaagtagaggaagtgaaaaaggttttggaagctgttggagg aactgtagaaattgaagcctgagacattttttaaaatattttgttattatgatacatttactatcacactcaagttcatg tctgtctataacgtcaaacattcatctctgagtgagagaggagtacagtattaataactattttgaatgatttgttgagc tgggcaaaatcaaacctacctttttacatcatcactagtttggccattaaaacttcatggcatcagaagtcaaagtcgaa ctacaaacaatttatcattgtatactgtggtgttagtggttatttgtcactcatctatttctttagtttgtagtcttgca tacaattatctacataaacatcattctctacaaaaaaaaaattgtggcagaaaacaataacgaggtcttcaaaacaaaac agttcagctctttttgtccctatcagtaatcctttcctctgatataatggagcacaataattatctgaaataaatcaacc aataattacagctctattatttgttctcattattagtcctcaacgcattagaaattacttttataaagcctaaaatcaaa atgctttacaaaacagaaacttcttgttcgaagcactgcagttcttttctttgcactacaacatcaaatttaccatatca ataattatattgttcatataagtctctttagaaatagcgattgcgcttgtgagatggtgattccatagtaatgtctgtgg aacatgctgatcgctttctgccttccctggattcagtatctgaaaaattggcgtctgagtggcttcggcgacgtggacag tgataagaacctaggcctccacccgtggcaaagaatgcgcttgtgtttatttctggtcgtgtagcaaaggcattaaatgg acaccactgggcacctgaatctacattatttgggcccactccagagggtaatatcatctcgttagaacctacggcagtcg tcaaagtgtgtcttgcttcatggtt |
|
Protein
| Protein ID | aug_v2a.02425.t1 |
|---|---|
| Definition | - |
>aug_v2a.02425.t1 MASRTGFRSLRLLASSKARSYSNLRYTWRASIQRWQVCAGCMRHDSTLAAPSPDNSAKEYPEKIRGIVDEISKLTLLEVS DLNELLKTTLKIEAAPMMPMMGAMSTAGAPSQEVEVEEGKEEPTEFTIKLIKFDAANKVKLIKEIKNMVPGLNLVQAKKF VEDLPQNVKEKASKEEVEEVKKVLEAVGGTVEIEA* |
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