Gene
| Gene Model ID | aug_v2a.02422 |
|---|---|
| Locus | scaf795 : 14736 ... 15990 : + |
| To GenomeBrowser | scaf795:14736..15990 |
| Genes list of scaffold | scaf795 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| usher syndrome type-1g protein | GO:0044707 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| aug_v2a.02422.t1 | gi|156368165|ref|XP_001627566.1| | predicted protein [Nematostella vectensis] | 3.00018e-42 |
| aug_v2a.02422.t1 | gi|507542459|ref|XP_004655223.1| | PREDICTED: Usher syndrome type-1G protein isoform X3 [Jaculus jaculus] | 7.0e-17 |
| aug_v2a.02422.t1 | gi|632952392|ref|XP_007891826.1| | PREDICTED: ankyrin repeat and SAM domain-containing protein 4B [Callorhinchus milii] | 9.0e-17 |
| aug_v2a.02422.t1 | gi|507542457|ref|XP_004655222.1| | PREDICTED: Usher syndrome type-1G protein isoform X1 [Jaculus jaculus] | 3.0e-16 |
| aug_v2a.02422.t1 | gi|593706216|ref|XP_007099777.1| | PREDICTED: Usher syndrome type-1G protein [Physeter catodon] | 1.0e-15 |
Transcript
| Transcript ID | aug_v2a.02422.t1 |
|---|---|
| Definition | - |
>aug_v2a.02422.t1 catccacatgatgcgcaatcaaaaaaatgttgaacgacagagaaagcatgccaaaaaagccatgatgaaacgaaacagaa agcaagagaagaatatgcagtccagggaaattgaatacgagaaaaaagttgtccaagaaacaagacagagaagcaaatca gaaatcaatggggtgagaggttcttgggctacgaatgggactacactgttggatcaaaattatactggcagtccattctc agaattgacaagcagtggttttgatgaatctggcaattcacctgaaaaagggagtataaaatcaaattcatccaaaaaat tcagaagcatacgagccatgggtgccctgcggtcaaaattcagctccttgcgtggttcaaacagtgacccaaaaatactt ggccagaggtcattgaatgattctggcatgtttgaggacatgtcaataagatcaccttcatttttagatcgattggagtc cacagcagttgaaagtcaagttgggagcttatcatctgactccaatgatccatttgaagctgaagagtcagaccttgctt atggacatgttgtaaagaattacgacaacaagggaaacgtcacaactcatgtgcattatgagctgaaagattcggccaag tcgtccaatggcagtgttgcgagtcgcacaactcacagcagccaacggagtaatttgagctcctcactccatgacatcca cagtttaaaatctattgagcttgaagacacttattctcagtctgacatgggagtggacaacatagacaccaaatcactgg ttactttcatggcatctctcaatttggaactatttacaccttttttggttaatgaaagcattgacttaaatactttaacc ctgtgtagcgacacagacttgaaagacataggttttcctcttggaccaaggagaaaattactggatgctgtcaagaaaag aacaatggtaataaatcatccaggaccaatgagtgactccaaaatatagatcactcaacaacactattcttttgcagaac agaagagaactttctttactccctcccttaacacctgcctaaacacacaaagaataaataagtaacaagtaggttgaggc actgacctctttttgaaagggttagcactttgccctgatccacaatttctttccattatactcacaaagcaatgttgtaa taattaattgttatcattttcagtcctgctggttactttttctctggcaaccagc |
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Protein
| Protein ID | aug_v2a.02422.t1 |
|---|---|
| Definition | - |
>aug_v2a.02422.t1 MMRNQKNVERQRKHAKKAMMKRNRKQEKNMQSREIEYEKKVVQETRQRSKSEINGVRGSWATNGTTLLDQNYTGSPFSEL TSSGFDESGNSPEKGSIKSNSSKKFRSIRAMGALRSKFSSLRGSNSDPKILGQRSLNDSGMFEDMSIRSPSFLDRLESTA VESQVGSLSSDSNDPFEAEESDLAYGHVVKNYDNKGNVTTHVHYELKDSAKSSNGSVASRTTHSSQRSNLSSSLHDIHSL KSIELEDTYSQSDMGVDNIDTKSLVTFMASLNLELFTPFLVNESIDLNTLTLCSDTDLKDIGFPLGPRRKLLDAVKKRTM VINHPGPMSDSKI* |
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