Gene
| Gene Model ID | aug_v2a.02108 |
|---|---|
| Locus | scaf704 : 182676 ... 183393 : - |
| To GenomeBrowser | scaf704:182676..183393 |
| Genes list of scaffold | scaf704 |
Manual annotation
| Study field | Transcription Factor |
|---|---|
| Gene name | Adi-ACSb |
| Description | Named thus based on BLASTP searches against NCBI nr and molecular phylogenetic analyses (NJ and ML). Adi-ACSb, Adi-ACSa1 and Adi-ACSa2 are aligned tandemly in the genome (There is one intervening gene each between Adi-ACSb and Adi-ACSa1, Adi-ACSa1 and Adi-ACSa2). |
| mRNA evidence |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| achaete-scute homolog 4 | GO:0003677 GO:0046983 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| aug_v2a.02108.t1 | gi|156351095|ref|XP_001622360.1| | hypothetical protein NEMVEDRAFT_v1g141592 [Nematostella vectensis] | 2.0e-36 |
| aug_v2a.02108.t1 | gi|557291024|ref|XP_006028089.1| | PREDICTED: achaete-scute homolog 4 [Alligator sinensis] | 4.0e-30 |
| aug_v2a.02108.t1 | gi|224095362|ref|XP_002196506.1| | PREDICTED: achaete-scute homolog 4 [Taeniopygia guttata] | 5.0e-30 |
| aug_v2a.02108.t1 | gi|564265820|ref|XP_006271739.1| | PREDICTED: achaete-scute homolog 4 [Alligator mississippiensis] | 8.0e-30 |
| aug_v2a.02108.t1 | gi|719776024|ref|XP_010220808.1| | PREDICTED: achaete-scute homolog 4 [Tinamus guttatus] | 1.0e-29 |
Transcript
| Transcript ID | aug_v2a.02108.t1 |
|---|---|
| Definition | - |
>aug_v2a.02108.t1 atcgatacacttcgtcaacacgatcccgaacacaacttgtatttgtctgggatacagcatccgaactcatcttccggatc ttaagacaagctaactacacccaggaccaacctgtgaggatatttcttgttgttatcagcaccgatctgggatttgcgtt aattgattttaaaatggagtatccagattttgccttttcaatgcccacttgttatcaactgggaattccgaacgagaaca ctccactcacacaacttccaccttattatggtcccccaatgacaatgccgatacctcatccactgtatgactacaatttg gagcctgcctttataagaaaacgcaacgagagggagcgaattcgagttcgccatgttaacgaaggatatgcgcgacttcg agaacaccttccggatgagcctacagataagagaatgtcaaaggtagagacccttcgagcagcaatcaggtacattaaac acttggagagtttgttagatgtcagtaaggaagaaaaaagagaaaagactgacaccgaagcagagaaaaggaaagcgact atggaagaagagaggtaaaaaacaacaattgttgtaatagcattctcaaggaacgttttcgcgttttgaagtcctatttg atctactgacttaacgaaagagtttgtttctgagatttctaaaagagctgatcgatgaaaaaaaacatcttctacgag |
|
Protein
| Protein ID | aug_v2a.02108.t1 |
|---|---|
| Definition | - |
>aug_v2a.02108.t1 MEYPDFAFSMPTCYQLGIPNENTPLTQLPPYYGPPMTMPIPHPLYDYNLEPAFIRKRNERERIRVRHVNEGYARLREHLP DEPTDKRMSKVETLRAAIRYIKHLESLLDVSKEEKREKTDTEAEKRKATMEEER* |
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