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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDaug_v2a.00586
Locus scaf258 : 102928 ... 106215 : -
To GenomeBrowser scaf258:102928..106215
Genes list of scaffold scaf258

Manual annotation
Annotation by Blast2GO
Annotation GO
cell cycle checkpoint protein rad1 GO:0000077 GO:0003684 GO:0006281 GO:0008408 GO:0030896

Blast Hit to nr / sp
query Subject ID Subject Name evalue
aug_v2a.00586.t1 gi|156359686|ref|XP_001624897.1| predicted protein [Nematostella vectensis] 0.0
aug_v2a.00586.t1 gi|156341299|ref|XP_001620718.1| hypothetical protein NEMVEDRAFT_v1g222786 [Nematostella vectensis] 0.0
aug_v2a.00586.t1 gi|602713343|ref|XP_007466895.1| PREDICTED: cell cycle checkpoint protein RAD1 [Lipotes vexillifer] 0.0
aug_v2a.00586.t1 gi|149732806|ref|XP_001500238.1| PREDICTED: cell cycle checkpoint protein RAD1 isoform X1 [Equus caballus] 0.0
aug_v2a.00586.t1 gi|260834029|ref|XP_002612014.1| hypothetical protein BRAFLDRAFT_124789 [Branchiostoma floridae] 0.0

Transcript
Transcript IDaug_v2a.00586.t1
Definition-
>aug_v2a.00586.t1
gtttagatccatttcgatatttcctttgagaattgaatcaaatgtctagactcacgcaacaaagtggcgatgacaatcgt
tatattctagttgccaagttggacaatgctcgtaatctccatagtatcctgaaagcggttcatttcaaagaggtaatttc
gtttgcgatacactgattattactcagtactgtgttgggaaatctggtttcgctgtgaaaacatcggaatcccattcctt
tcttttccatctcttttgctctacctctctacaatcaacaccattgtggtcatcaccataatccacttcgattttcataa
tttgttttggagcaattgcagaatacccggccccattgtttccgataggcggcattctctgaagaacgagtcagaataca
atagaggttattctcatgcaaatagatgggcccggtatgtagttgtctctaagggtggatagcactatctacttgataag
taccaccaaaacctattgagttattacagttggatgatgctactattaattttgtcccttgaacaactgggcccagaacc
tcaataccaccatccctttcatcaagaccaccgtcgttttcagccaaacattaatagtaatattattattggtattccta
gctgtccaagagatttgaagtagcaaaggaaatcactaataaccttattgattataaattattttatcatggtcagtcag
ctacttgttttgtgagcagcaatggtctcaagttcacggtggaagatgccaagtgtgtacaggccaatgcgtttgtgcaa
agcggtatatttcaggagtacactttcaaagaagagagtgccacctttaggataagtttgaatgttctgttggtaaggaa
gtaatttggtgctttttacatacagacctgtatgaccctttttcttgtgaaatcaaatcccctgaacacctttggggaaa
atatctgattcccttcatctttttcaggaatgtctgaatatttttggttcctctaaagacactgcaacttttacagcact
gaagatgtgttatgctggttatggatatcctctcatcctcatgtaataattatctcatctttatcttcttatccagtttc
atgatcagattattcaacattttcatcaaataaataaaaaaatacagnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnncaagaacctgatgaaacattagactttgacttc
agcagtgctgaggttcttaacaagattatcatgaaagtaagacagttatatattgtattagcgtggaatggagcagttct
gtattttcttgacaatgaatggttaaggtaaaaaagcctttctgcagtactgacctaagaaataagtttcagtagatcat
attcatcctacatatacttaacacttatcttttgcatctttattgcagtctgaatgcttgaaggaagcattcaatgagct
ggacatgacaagtgaagttcttcagatcctcatgtcaccagacaatccctatttcagactttcaacatttggccatgctg
gaagcactcatgtaagatttgttcatgtgtttcacagacttgggtcaagattttgtcgcagttgttctgtttgttgtgaa
cagatgcaattcaatagtgaacatacctgctttctgatgttttttagtccgattttcctaaagaatctgacatggtagaa
tcctttgagtgccagcaaacacagaccaacaggtataattattatttcattatgcagggcataaggcccatttagtagat
cctcatctgtgtggatggccactgtgaaatgaacactaactttgtcatgctccttggttcaaaaaacagtattttttttt
ctgctttaggtacaaaattagtcttctcaagccatccactaaggcactacaactttcaagcaagatttccatcagaatgg
acaatagaggatttttgtcattgcagtatatgatcataaatgaggatggacaagtctgctttgtggaatatttagtacgt
accaaacactaatgcttttctttggtacttttccaaaaagaagaaacatagatttgtaatttattataatctacaccaat
tatttttaagctaatgaagagaaagccgttttaccacattattgtgaaaggcatactaatgtaaaattaatgctaagata
gagattgtcacagttatgaataacaaaagaaaaggctgcaaatttcaggcaacagatattttctaagggtttatggttaa
tgcggccttgggatattgggagaatactgaagtgttctcccaatatcttaagtgggtttactatgcctgtatacctatac
aaaatgtgctctattgcttttacaaaacagtcataagtagaagcaattttgtatgagtttactagcacaataacccatag
gtttttcaccaatcagaaaacacctactgtagtatccaagttgttttacaaaagattttaaacaatgctcaagtcattaa
ttttaatattgatattaatgtcaatttccaaccactagtgtgctcctgacgaagaagttgatgaggatgatggtgatgag
gatctcagctgaaaacagaagcaaagataccagaaagaagagatgtgtttcagccgtgtttcttagaaaagcctatctat
aaaaacaatacagcatggggacaacttgtttgttgataccaacaagaagagatgtggaaggttaaaccaaatattacaaa
aagtcctggctatcagtttcaagaagcagactgaaactccatctgatcaaaatattggtaataatgatatgaaaactctg
aaaatggaaagcaaaatagtttgttctgcagtcagttgaggagcacacttacatgcccctccctcccctacattttagca
gagggccaaacaaagttggggttaatattgcaaaaaaaaaaaaagtagaaaacgtttcaatgtgctgaataaaagaacta
ttttgaggtctgagtgtgtcacagccttggaatgtctgattactctatatttcatacaatttcaaaataatttattcttt
ggcaataa

Protein
Protein IDaug_v2a.00586.t1
Definition-
>aug_v2a.00586.t1
MSRLTQQSGDDNRYILVAKLDNARNLHSILKAVHFKESATCFVSSNGLKFTVEDAKCVQANAFVQSGIFQEYTFKEESAT
FRISLNVLLECLNIFGSSKDTATFTALKMCYAGYGYPLILISAEVLNKIIMKSECLKEAFNELDMTSEVLQILMSPDNPY
FRLSTFGHAGSTHSDFPKESDMVESFECQQTQTNRYKISLLKPSTKALQLSSKISIRMDNRGFLSLQYMIINEDGQVCFV
EYLCAPDEEVDEDDGDEDLS*

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