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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug2.0_99.1_30210
Locus scaffold99.1 : 390562 ... 404375 : -
To GenomeBrowser scaffold99.1:390562..404375
Genes list of scaffold scaffold99.1
Synonym pfu_aug1.0_363.1_29207

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug2.0_99.1_30210.t1 2 1 GpcrRhopsn4 128 185 0.0 237.5 1.9e-11 1.4e-07 30.9
pfu_aug2.0_99.1_30210.t1 2 2 GpcrRhopsn4 199 452 0.0 237.5 0.0 0.0 210.7
pfu_aug2.0_99.1_30210.t1 1 1 Lung_7-TM_R 233 457 6.1e-06 25.3 1.4e-09 1.1e-05 24.5

Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug2.0_99.1_30210.t1 gi|676458866|ref|XP_009055116.1| hypothetical protein LOTGIDRAFT_118765 [Lottia gigantea] 0.0
pfu_aug2.0_99.1_30210.t1 gi|571506591|ref|XP_006570860.1| PREDICTED: transmembrane protein 145-like isoform X1 [Apis mellifera] 0.0
pfu_aug2.0_99.1_30210.t1 gi|572304220|ref|XP_006618079.1| PREDICTED: transmembrane protein 145-like [Apis dorsata] 0.0
pfu_aug2.0_99.1_30210.t1 gi|749795689|ref|XP_011151240.1| PREDICTED: integral membrane protein GPR180-like [Harpegnathos saltator] 0.0
pfu_aug2.0_99.1_30210.t1 gi|752864859|ref|XP_011268850.1| PREDICTED: transmembrane protein 145-like [Camponotus floridanus] 0.0

Transcript
Transcript IDpfu_aug2.0_99.1_30210.t1
Definition-
>pfu_aug2.0_99.1_30210.t1
atggatgaaaaacgtagtgtttctgtctttttagaggatttacggtacatagatagtggttattttatggaattttacag
taacgcttcactgaaaaaggggcaccagatctgtgcacctatgtttaataaaattgacaccattgcttttgattatcctt
gtcaaacgaacggtacacaggatttcatcaggaaaattccttgtcctaaaaatggaatctgtactgacgaggatacgccc
gaaaatttggtgcctggatatcagtttacatataaactacaagatgtttacttgccaaggttttggtatgtgagcatggt
ttcatgttaccgaaatacaacaaagaacaattgctcttgggtcaacaacgagagcgaaaatatagagattgaatacgaca
tctggttggtcaacgggaatccagactccaaacaccttaacccgttcgaacatcaattctcatttgaagaccacgatata
tttgaatgttattttgttttcctggggatatacattattctaattccgtttgggttattcatcatatcaaaacagttaca
cacaattanttgggtcaacaacgagagcgaaaatatagagattgaatacgacatctggttggtcaacgggaatccagact
ccaaacaccttaacccgttcgaacatcaattctcatttgaagaccacgatatatttgaatgttattttgttttcctgggg
atatacattattctaattccgtttgggttattcatcatatcaaaacagttacacacaattacgagattgataattttgac
gattatactagaatttgttggagttttattcaattttattcatgttgccgtttttgcttggaatggtagcggagttcatg
ttatgtctgtgatagggaatgccatcgacgtcattgcacagtgcttatttatgctcgtattactcatgatcgccaaagga
tggacaattacacattaccaacttagaggcagattgatagtgtttgcgttatggggagtttacgccattctaaatgttgt
gctttttatatggactttaacagaaatagatgcaatatcaaacatcgacgagtggcagacttggcccggcataattacgt
gtggattccgtctgtgtattatggtgtggtttatattagaggtgcggcacacgtttcagatcaacaaagaccggagtcga
ctccagttcctacagcagtttggagcatatttcctcgtttggtttatatacttacctgtcttagctctcataagcactca
gttctcagcgttgtggaaaagaaaaacaattctcacaataacaaattcagctgaccttctgtcctacttggtgctcttat
atttattatggccgagccgttctatattgtacctcatcaggggagagaacccactaccaacttttgagttagaaatcgct
ggtctgcttgatgatgatgaaaatgataacaccgtttttaccagaccaggaaaactcaaagtcgtgaagaaaataacaaa
acagagtaaacagaatggctcagaaacaaatagtattagttttgtgtggatttga

Protein
Protein IDpfu_aug2.0_99.1_30210.t1
Definition-
>pfu_aug2.0_99.1_30210.t1
MDEKRSVSVFLEDLRYIDSGYFMEFYSNASLKKGHQICAPMFNKIDTIAFDYPCQTNGTQDFIRKIPCPKNGICTDEDTP
ENLVPGYQFTYKLQDVYLPRFWYVSMVSCYRNTTKNNCSWVNNESENIEIEYDIWLVNGNPDSKHLNPFEHQFSFEDHDI
FECYFVFLGIYIILIPFGLFIISKQLHTIXWVNNESENIEIEYDIWLVNGNPDSKHLNPFEHQFSFEDHDIFECYFVFLG
IYIILIPFGLFIISKQLHTITRLIILTIILEFVGVLFNFIHVAVFAWNGSGVHVMSVIGNAIDVIAQCLFMLVLLMIAKG
WTITHYQLRGRLIVFALWGVYAILNVVLFIWTLTEIDAISNIDEWQTWPGIITCGFRLCIMVWFILEVRHTFQINKDRSR
LQFLQQFGAYFLVWFIYLPVLALISTQFSALWKRKTILTITNSADLLSYLVLLYLLWPSRSILYLIRGENPLPTFELEIA
GLLDDDENDNTVFTRPGKLKVVKKITKQSKQNGSETNSISFVWI

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