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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug2.0_99.1_30201
Locus scaffold99.1 : 215165 ... 216104 : -
To GenomeBrowser scaffold99.1:215165..216104
Genes list of scaffold scaffold99.1
Synonym pfu_aug1.0_8237.1_53136

Manual annotation
Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug2.0_99.1_30201.t1 gi|545868243|ref|XP_005670528.1| PREDICTED: retinitis pigmentosa 1-like 1 [Sus scrofa] 1.0e-14
pfu_aug2.0_99.1_30201.t1 gi|642929346|ref|XP_008195796.1| PREDICTED: putative mediator of RNA polymerase II transcription subunit 26 [Tribolium castaneum] 1.0e-11
pfu_aug2.0_99.1_30201.t1 gi|752875324|ref|XP_011255010.1| PREDICTED: transcription factor mef2A-like, partial [Camponotus floridanus] 4.0e-09
pfu_aug2.0_99.1_30201.t1 gi|401405158|ref|XP_003882029.1| conserved hypothetical protein [Neospora caninum Liverpool] 2.0e-06

Transcript
Transcript IDpfu_aug2.0_99.1_30201.t1
Definition-
>pfu_aug2.0_99.1_30201.t1
atgaggagaatcagatcattcagcaacacagtgaggagaatcagcccatacagcaacacattgaggataattggatcaaa
cagcaacacgcaacacatagtggaggatcagatcattcagcaacacagtgaggatagtcagaccatacagcaacaccatg
aggagaatcagaccatacagcaacaccatgaggagaatcagatcattcagcaacacagtgaggagaatcagaccatacag
caacacagtgaggagaatcagatcattcagcaacacagtgaggatagtcagaccatacagcaacaccatgaggagaatca
gaccatacagcaacaccatgaggagaatcagatcattcagcaacacagtgaggagaatcagaccatacagcaacacagtg
aggagaatcaagcacgtacaacccacttacttttttgcacaacatatgatgcatgtaaccacccatatatgtag

Protein
Protein IDpfu_aug2.0_99.1_30201.t1
Definition-
>pfu_aug2.0_99.1_30201.t1
MRRIRSFSNTVRRISPYSNTLRIIGSNSNTQHIVEDQIIQQHSEDSQTIQQHHEENQTIQQHHEENQIIQQHSEENQTIQ
QHSEENQIIQQHSEDSQTIQQHHEENQTIQQHHEENQIIQQHSEENQTIQQHSEENQARTTHLLFCTTYDACNHPYM

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