Gene
| Gene Model ID | pfu_aug2.0_99.1_30198 |
|---|---|
| Locus | scaffold99.1 : 137707 ... 160815 : - |
| To GenomeBrowser | scaffold99.1:137707..160815 |
| Genes list of scaffold | scaffold99.1 |
| Synonym | pfu_aug1.0_4149.1_01640 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_99.1_30198.t1 | 2 | 1 | DNase_II | 25 | 200 | 8.2e-06 | 25.0 | 9.8e-09 | 4.9e-05 | 22.5 |
| pfu_aug2.0_99.1_30198.t1 | 2 | 2 | DNase_II | 421 | 484 | 8.2e-06 | 25.0 | 0.054 | 270.0 | 0.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_99.1_30198.t1 | gi|124802089|ref|XP_001347360.1| | transcription factor with AP2 domain(s), putative [Plasmodium falciparum 3D7] | 1.0e-05 |
| pfu_aug2.0_99.1_30198.t1 | gi|457868801|ref|XP_004221322.1| | phist protein, partial [Plasmodium cynomolgi strain B] | 1.0e-05 |
Transcript
| Transcript ID | pfu_aug2.0_99.1_30198.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_99.1_30198.t1 atgcagaggattccgaacattgttacagtactgtcctggatatctacgactatttatcttaccaccgcggcaacatgcaa aagtccacgagataccacggtggattggtggattctttatcaacaatcatcgatgccgttttttcatttctatgtggaca gttttgatagtagtaatatattgtatcatcctcctgaagaagaaacgagcgttctatctcaattcatggactcaattcta agtggagaatataagcagtacatggtctactcatatgacgtcatcaatgtcagaaagattgcagagagtctacattttcc aaccatgctcaaatggatgcacggtatcttagcgacagataatactctgtcctctggtgcctggcttcttcacaacaatt tacttttcccgccatttgaagcacgtgacttagccccgcctacatcaaggatttggtacaataccgtcctcggagactca tcagacaatgtcttctatatctgtctgtcacttgattcgaattctgacgtaaagggtgttttagataacatcttaagtgg caacccaactattctaagaagtcagctatctccttcattctatggcggaaatttcgctcaatctcttttgttccagactt ctacgttttccctagaggagtcagctttaacattcttggactgcttgaatgcaacacgagatgaaactctgacaaaatgt ctattccggttttcatcaagaggagacaatccagtcaccgttatcacgaggtcacgtggtactttgaaacaaagtagggg tctgtgctacgatacgacatctcttgtcacaaagaatttggtttctgtaacgaattctaatcaagaaaccaaaggattca cagacatgactacaatgttcgttctgtctaatgaccccatgacccctgcctacggagtcacgtgctttggtcaggatgtc gcagaatattcagagattgtcaccattatgatatgtgtaaaattaccaactttacataaagagctggtaaagtcctcatt gttcaccagtattctatgttccgggcgtgaacaagaaactgagaatactgtttctgtgtcgaacgcaatgaagaacgagt tgtccacttcactgttagacggatcattgtctgcaagtccggatgattcctgtaatcagcagtcatgcacatccattata gaatcagaggatgcgggtcaggaggaggaaagcatgtggaaaaatcccttactgaaaagtaataaattgacccacatata ccatcagctcattcaagtacctgtggtgtacgaaaatatgaaaacagagaaggtacatgacgcgatggaaagcaaacaat tgaaaagaaccagaagggcaatctttgttgagcaggatgaagaaatgcaaaagtacattttagagtcagagacaccgctg tttgctcttttctgccaacgagattgcagatactgtcagccagtaaaggaacttttccatggcatgagtcaggactttac aaactgtgtattcttgattgttgacgcaaacatgccgacccttcctcgacacttacaggttccgtatacaccattagtaa ggttcaggggtaagactccagacagttgggttaacttcgatggaaaaaaatacgacatcttatctttgacatcatttctc agtatgcaactacgcggcttacaaacagatgacgacccaggagaggagcagctatctactaaagaagtaatatcaagtcg tagtaaaagatctctaggcgatggattcatcaagaagcatatatccacattcaaggatatgggtggagccacaccacggt cggcaaatgtggataaagtatccctcgatgttatgactaaattaagaaagccactgatgaagcgaaaaaaatggaaaggc tatgacgatattgattattttgttcagacttacatcgttgccaatagttcagacactttaaaaatgtccattgatatggc agttcaggatgctattaatgttttggacaacagatggtcccatgtgagcagaatctgtagcaggatggattggatgacaa accacgtgactgatgacgtccctgatcacatgaccaaccacgtgacaggtaacatcactgatcacataactgatgatgtc accgatcacatgactgatgacgtcactgctcatatgatcaaccacatgacagatgacgtcaatggtcacataatcaacca tatgactgatgacgtcaatcatcacataatcaaccatatgactgatgacgtcactagtcacataatcaaccacatgaatt atgacatcaatggtcacataatcatccccatgaatgatgacgtcaatggttacatgactgatgacgtcagtggtcacatg accacttcattggtcatatga |
|
Protein
| Protein ID | pfu_aug2.0_99.1_30198.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_99.1_30198.t1 MQRIPNIVTVLSWISTTIYLTTAATCKSPRDTTVDWWILYQQSSMPFFHFYVDSFDSSNILYHPPEEETSVLSQFMDSIL SGEYKQYMVYSYDVINVRKIAESLHFPTMLKWMHGILATDNTLSSGAWLLHNNLLFPPFEARDLAPPTSRIWYNTVLGDS SDNVFYICLSLDSNSDVKGVLDNILSGNPTILRSQLSPSFYGGNFAQSLLFQTSTFSLEESALTFLDCLNATRDETLTKC LFRFSSRGDNPVTVITRSRGTLKQSRGLCYDTTSLVTKNLVSVTNSNQETKGFTDMTTMFVLSNDPMTPAYGVTCFGQDV AEYSEIVTIMICVKLPTLHKELVKSSLFTSILCSGREQETENTVSVSNAMKNELSTSLLDGSLSASPDDSCNQQSCTSII ESEDAGQEEESMWKNPLLKSNKLTHIYHQLIQVPVVYENMKTEKVHDAMESKQLKRTRRAIFVEQDEEMQKYILESETPL FALFCQRDCRYCQPVKELFHGMSQDFTNCVFLIVDANMPTLPRHLQVPYTPLVRFRGKTPDSWVNFDGKKYDILSLTSFL SMQLRGLQTDDDPGEEQLSTKEVISSRSKRSLGDGFIKKHISTFKDMGGATPRSANVDKVSLDVMTKLRKPLMKRKKWKG YDDIDYFVQTYIVANSSDTLKMSIDMAVQDAINVLDNRWSHVSRICSRMDWMTNHVTDDVPDHMTNHVTGNITDHITDDV TDHMTDDVTAHMINHMTDDVNGHIINHMTDDVNHHIINHMTDDVTSHIINHMNYDINGHIIIPMNDDVNGYMTDDVSGHM TTSLVI |
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