Gene
| Gene Model ID | pfu_aug2.0_99.1_30195 |
|---|---|
| Locus | scaffold99.1 : 49040 ... 79485 : - |
| To GenomeBrowser | scaffold99.1:49040..79485 |
| Genes list of scaffold | scaffold99.1 |
| Synonym | pfu_aug1.0_10407.1_17622 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_99.1_30195.t1 | 2 | 1 | zf-PARP | 7 | 55 | 8.1e-29 | 99.7 | 6.1e-12 | 1.5e-08 | 34.7 |
| pfu_aug2.0_99.1_30195.t1 | 2 | 2 | zf-PARP | 108 | 189 | 8.1e-29 | 99.7 | 1.2e-20 | 3.0e-17 | 62.6 |
| pfu_aug2.0_99.1_30195.t1 | 1 | 1 | PADR1 | 252 | 304 | 8.6e-25 | 85.9 | 7.4e-28 | 1.8e-24 | 84.8 |
| pfu_aug2.0_99.1_30195.t1 | 2 | 1 | BRCT | 308 | 326 | 4.9e-06 | 26.6 | 6.0 | 15000.0 | -3.9 |
| pfu_aug2.0_99.1_30195.t1 | 2 | 2 | BRCT | 350 | 424 | 4.9e-06 | 26.6 | 5.7e-09 | 1.4e-05 | 25.1 |
| pfu_aug2.0_99.1_30195.t1 | 1 | 1 | WGR | 510 | 592 | 1.8e-19 | 69.4 | 2.4e-22 | 5.9e-19 | 67.7 |
| pfu_aug2.0_99.1_30195.t1 | 1 | 1 | PARP_reg | 622 | 753 | 0.0 | 166.3 | 0.0 | 0.0 | 165.3 |
| pfu_aug2.0_99.1_30195.t1 | 1 | 1 | PARP | 755 | 938 | 0.0 | 208.7 | 0.0 | 0.0 | 207.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_99.1_30195.t1 | gi|498939389|ref|XP_004541848.1| | PREDICTED: poly [ADP-ribose] polymerase 1 [Maylandia zebra] | 0.0 |
| pfu_aug2.0_99.1_30195.t1 | gi|584004287|ref|XP_006797147.1| | PREDICTED: poly [ADP-ribose] polymerase 1-like [Neolamprologus brichardi] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_99.1_30195.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_99.1_30195.t1 atggtgtcattaatttcttttcagtcgccattctttgatggaaagcaaccaaactggtttcattacgcctgcttttggaa acgagctaaagttctaacccatgcagacatacatggatttgattcattaagatgggaagaccaacagaagataaaggaca aaataggcggtgggtcaggtggtggatccggtggtgattctgtatccagcgctgccagtacagacttctccacagagtat gccaagtcgaacaagagtgggtcaggtggtggatccggtggtgattctgtatccagcgctgccagtacggacttctccac agaatatgccaagtctaacaagagtatgtgtaggggatgtgacgataaaattgccaaggatgaggtgcggatttccagga aagattatgacagtcagagagctaagatgtacggcccggtggacctgtggtatcatgtcgactgcttcgtggaggaacgg gaagaactcggcttcggtaccgacatgaatcctgacaaaataaatggttttgctaggctgaagaaggaagataaagacat gctgatagaaaagctagggaaaggtgataagggaacaaagcgtaagggaggtgacgccaagggatctggagggaaaaaag ccaagacaaaggagactgaggaagagaagcagctacggaaagaagtggctaacaatgcactgaaaatactgttagaaatc aaccatcagtatgtaccagcaggagagagtaagttgttagatgctgttgctgactgtatgatgtttggcgcattagaaaa gtgtccggagtgtaaagaaggccagctggtatacggggggagtggttacagatgtacaggaaatgtgtcagagtggacca aatgtatgtataataccaaatcaccaaaacggagagcgtttaaagtcccaaaggagtaccatgatgcagcttgtctaaag aattataagtatgtgaagagagagagagtatttcctgttgaaagcgcaccaagctcatctctggacagtacagattctgg atcgtcaaacaaaccattagaaaatatgaaatttgtgatactaggaaagacagtcaaatctaaaggtgacctaactaagg aaatcatgtccctaggtggtcatgtagttagcaaagtggcgtctgacgtggcggcttgtatcggcactaaagatgaggtg aacaagaagagcaagaacgtgaaggaagcggaaaaagcaaatatccaagttgtcgcagaggattttctggatgaagtgaa gaaaggcggagcagtgttactgatacagaaacataacctagcatcatggggagctgatccttccacaaggattaaagaac caggcgtcgccagaaagatggggaaaagtgccgaatacatcagaaaaaaagacgagaatatgtatacgaagagcgttcct tcaaccatgaaaatgaaagtgaagggcggggctgctgttgacccagattcaggtctggaggatacggcccatattttcca acataacggagatatctacaatgtcgtactaggtttagtggatgtagtaaggggaactaactctttctacaaattacaag ccctggaaagtgacaaagggggagcgtggtggttgtttagagcatgggggagagtgggtacgtcaattggcggaaataaa accgagagattcggatcggcaaacaccctaatggccggctttcaacaactgtatgcagaaaagacagggaatgaatggtc aaacagacatgacttcaagaaatatcctaacaaattctatcctctggatattgattatggccaggaagatgaagaggtca tgaagctcgacgttaaaagctcaaaatccaaactaccgtcatccgtccaagacttgataaggctgatatttgatgtggaa agcatgaagaaagccatgttggagtttgagattgatttgaagaagatgcccctgggtaagctgtctaagaagcagataca gaatgcctatagtgtactgacagaattaacaaagttaatggagaaaggagggacacaaacacagttcctggatgccacaa atagattttatacccttgtaccacacgactttggtctgaagaaaccacccctccttgacagcagtgaagtgataaagtcc aaggttgagatgttggataacttgttagagatagaggtcgcttacaacatgttaaagggaggcgactctggcgaagatcc cattgacgcccattataaaaaactacataccaagctggtgccagtggagaagaaatctgatgaatatgaacgtttgtgta attatgtgaagaacacccatgctgcgacacataaccagtatgacttggttgtagaagagattttcacagtagacagagag cacgaggcggacaggtatgctccattccgagatctacataacaagatgttattgtggcacgggtcacgtacaactaattt tgccggtattctgtcccagggtctcaggatagccccgcccgaagccccagtaacaggctacatgtttggtaaaggaatct atttggccgacatggtatccaagagtgctaactactgtaggacgtcaaaggctgaccctactggtctactgctgttatgt gaagcagctctaggaaacatgtatgagagaactggagctgaattcgttacatccctacccaagggcaaacacagctgtaa aggtataggaatgacttgtcctgaccctaagcagtcctacaccaccccagacgatgttgtgatacctttggatgatgatg atgatgatgatgatgatgatgatgatgaactttacattatgtgcatctga |
|
Protein
| Protein ID | pfu_aug2.0_99.1_30195.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_99.1_30195.t1 MVSLISFQSPFFDGKQPNWFHYACFWKRAKVLTHADIHGFDSLRWEDQQKIKDKIGGGSGGGSGGDSVSSAASTDFSTEY AKSNKSGSGGGSGGDSVSSAASTDFSTEYAKSNKSMCRGCDDKIAKDEVRISRKDYDSQRAKMYGPVDLWYHVDCFVEER EELGFGTDMNPDKINGFARLKKEDKDMLIEKLGKGDKGTKRKGGDAKGSGGKKAKTKETEEEKQLRKEVANNALKILLEI NHQYVPAGESKLLDAVADCMMFGALEKCPECKEGQLVYGGSGYRCTGNVSEWTKCMYNTKSPKRRAFKVPKEYHDAACLK NYKYVKRERVFPVESAPSSSLDSTDSGSSNKPLENMKFVILGKTVKSKGDLTKEIMSLGGHVVSKVASDVAACIGTKDEV NKKSKNVKEAEKANIQVVAEDFLDEVKKGGAVLLIQKHNLASWGADPSTRIKEPGVARKMGKSAEYIRKKDENMYTKSVP STMKMKVKGGAAVDPDSGLEDTAHIFQHNGDIYNVVLGLVDVVRGTNSFYKLQALESDKGGAWWLFRAWGRVGTSIGGNK TERFGSANTLMAGFQQLYAEKTGNEWSNRHDFKKYPNKFYPLDIDYGQEDEEVMKLDVKSSKSKLPSSVQDLIRLIFDVE SMKKAMLEFEIDLKKMPLGKLSKKQIQNAYSVLTELTKLMEKGGTQTQFLDATNRFYTLVPHDFGLKKPPLLDSSEVIKS KVEMLDNLLEIEVAYNMLKGGDSGEDPIDAHYKKLHTKLVPVEKKSDEYERLCNYVKNTHAATHNQYDLVVEEIFTVDRE HEADRYAPFRDLHNKMLLWHGSRTTNFAGILSQGLRIAPPEAPVTGYMFGKGIYLADMVSKSANYCRTSKADPTGLLLLC EAALGNMYERTGAEFVTSLPKGKHSCKGIGMTCPDPKQSYTTPDDVVIPLDDDDDDDDDDDDELYIMCI |
|