Gene
| Gene Model ID | pfu_aug2.0_97.1_23449 |
|---|---|
| Locus | scaffold97.1 : 371801 ... 386366 : - |
| To GenomeBrowser | scaffold97.1:371801..386366 |
| Genes list of scaffold | scaffold97.1 |
| Synonym | pfu_aug1.0_24516.1_33441 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| potassium voltage-gated channel subfamily b member 2 | GO:0005216 GO:0006811 GO:0016020 GO:0044763 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_97.1_23449.t1 | 1 | 1 | BTB_2 | 9 | 99 | 8.1e-18 | 64.4 | 5.5e-21 | 2.0e-17 | 63.1 |
| pfu_aug2.0_97.1_23449.t1 | 4 | 1 | Ion_trans | 159 | 183 | 3.2e-13 | 49.3 | 0.25 | 930.0 | -1.1 |
| pfu_aug2.0_97.1_23449.t1 | 4 | 2 | Ion_trans | 227 | 247 | 3.2e-13 | 49.3 | 0.91 | 3400.0 | -3.0 |
| pfu_aug2.0_97.1_23449.t1 | 2 | 1 | Ion_trans_2 | 350 | 362 | 9.6e-11 | 41.2 | 0.67 | 2500.0 | -1.8 |
| pfu_aug2.0_97.1_23449.t1 | 4 | 3 | Ion_trans | 356 | 370 | 3.2e-13 | 49.3 | 0.33 | 1200.0 | -1.5 |
| pfu_aug2.0_97.1_23449.t1 | 4 | 4 | Ion_trans | 414 | 597 | 3.2e-13 | 49.3 | 8.7e-17 | 3.2e-13 | 49.3 |
| pfu_aug2.0_97.1_23449.t1 | 2 | 2 | Ion_trans_2 | 526 | 597 | 9.6e-11 | 41.2 | 2.6e-14 | 9.6e-11 | 41.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_97.1_23449.t1 | gi|597779483|ref|XP_007253348.1| | PREDICTED: potassium voltage-gated channel subfamily B member 1-like [Astyanax mexicanus] | 1.0e-31 |
| pfu_aug2.0_97.1_23449.t1 | gi|504151524|ref|XP_004588099.1| | PREDICTED: potassium voltage-gated channel subfamily B member 2 [Ochotona princeps] | 2.0e-31 |
| pfu_aug2.0_97.1_23449.t1 | gi|667258850|ref|XP_008566701.1| | PREDICTED: potassium voltage-gated channel subfamily B member 2 [Galeopterus variegatus] | 2.0e-31 |
| pfu_aug2.0_97.1_23449.t1 | gi|528519527|ref|XP_695259.4| | PREDICTED: potassium voltage-gated channel subfamily B member 2-like [Danio rerio] | 3.0e-31 |
| pfu_aug2.0_97.1_23449.t1 | gi|742165620|ref|XP_010884275.1| | PREDICTED: potassium voltage-gated channel subfamily B member 2-like [Esox lucius] | 3.0e-31 |
Transcript
| Transcript ID | pfu_aug2.0_97.1_23449.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_97.1_23449.t1 atgtcgaatggagatttccgtgctgtgaaaataaaccttcgtggaacagtctttgttacaaatgctgagaaattcagatg ttttcctgactcaagactagcaaaactgacgagtgcagggatcgggtttgattcagagaaagacgaattcttctttgata gaaatccgactctatttcattccattctagatgcctatgataacgaggaattccactcacccaaaaacttctgctccaca attatccaaagagaattgcgattctggcagttggaaagatacattgtagggaaatgctgtctgagtacattgtacaagga cgatgataacgttaaaatttacaaagagtatgaagaactgttcaggagctacacatactcagagacagataactcatcaa ataagttacgatcaccaaatgcactttttcctatgacaagtggtaaaaccgcaaggcaaaggctttgggatatacttacc catccgacgtcatcaaacattgcaaaggtatattttgcaacaatagcattatccgtcttgttatccatagtagtatttgc cctttccacgttaccttcgtttcggcaacctcgagagagggagatacaacttctggagaacataacgagtccaaaaatag tcaaatatatgacaacaaagcagagtaacgtactcttcatccttgatgtatcaaccaattcgatcctggcatttgatatg gctttaggtgtgtacgggagtccaaatcgcttaaaaaccattgactggtacgctgttggggatgctgtaaccatctttgc ggtgtatgcctacaatgtcatagaccaaacggacagcttagtgtctcttgacaccgatgcattgcgatacctaattctac tggatagtgacgatatacgcatacacaaagaatacaaagaatatttgggctctgaaaaacactcacccaatacccgcgtc cattctgtagaagcctctatggacgatacagattatattggaaacagagagaagatatggaaaatggtctctgaccctaa ttcttcgacatttgcaaaggtctactacgcacttgttgttatgaccgtcctatgttccattctcatatttacagtctcga ctgtcgacacttttcgccaaccaagagccactgatgtcaaggtttctggtaacttgacatcgactaacagtaagatagcg atgtacttgacgacgagacagcacagagctttagcaaccttggactgtatctctaataccgtcttagcaattgactacgt tcttgtaatttactgcagcccaaacagagttaaagccatgaaaagttggtacaacatcgttgatctgttggtccttctct tcgtttatgccttcaacattttggatcagacagataatacaatacttatggatcaaagccagttggtagtattggcaaca ttcatcgcagcaatatacagttttcgtatcctccgagtacttcgtttgatgaatcatacgacaggaatgattgccttata catgacgttcctttcaaactgtcatgtcttgttttatttcttcactgcattcgtctctgttagcctattctctgccacag tgttataccatgctgagctatggcagtcggactcttttaacaacatctaccagtctatttggtgggcggtggttacactc agcacggtaggatatggtgatatggtacctcagtcagtcttcggtcagattttagctgctgtcgttataatctatggctt attgataatagcaattccgtttgttatcatcactggcaactatggcagttattattcattctacgaattcatcaaagaac atgacaaggaggaagagggcaagaaagcaattgacaatgaaaatggtaattcataa |
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Protein
| Protein ID | pfu_aug2.0_97.1_23449.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_97.1_23449.t1 MSNGDFRAVKINLRGTVFVTNAEKFRCFPDSRLAKLTSAGIGFDSEKDEFFFDRNPTLFHSILDAYDNEEFHSPKNFCST IIQRELRFWQLERYIVGKCCLSTLYKDDDNVKIYKEYEELFRSYTYSETDNSSNKLRSPNALFPMTSGKTARQRLWDILT HPTSSNIAKVYFATIALSVLLSIVVFALSTLPSFRQPREREIQLLENITSPKIVKYMTTKQSNVLFILDVSTNSILAFDM ALGVYGSPNRLKTIDWYAVGDAVTIFAVYAYNVIDQTDSLVSLDTDALRYLILLDSDDIRIHKEYKEYLGSEKHSPNTRV HSVEASMDDTDYIGNREKIWKMVSDPNSSTFAKVYYALVVMTVLCSILIFTVSTVDTFRQPRATDVKVSGNLTSTNSKIA MYLTTRQHRALATLDCISNTVLAIDYVLVIYCSPNRVKAMKSWYNIVDLLVLLFVYAFNILDQTDNTILMDQSQLVVLAT FIAAIYSFRILRVLRLMNHTTGMIALYMTFLSNCHVLFYFFTAFVSVSLFSATVLYHAELWQSDSFNNIYQSIWWAVVTL STVGYGDMVPQSVFGQILAAVVIIYGLLIIAIPFVIITGNYGSYYSFYEFIKEHDKEEEGKKAIDNENGNS |
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