Gene
| Gene Model ID | pfu_aug2.0_97.1_23446 |
|---|---|
| Locus | scaffold97.1 : 320090 ... 346874 : - |
| To GenomeBrowser | scaffold97.1:320090..346874 |
| Genes list of scaffold | scaffold97.1 |
| Synonym | pfu_aug1.0_3582.1_30460 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| multidrug resistance-associated protein 1 isoform x1 | GO:0016020 GO:0016787 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_97.1_23446.t1 | 1 | 1 | BTB_2 | 8 | 95 | 1.2e-15 | 57.4 | 6.7e-18 | 3.8e-15 | 55.8 |
| pfu_aug2.0_97.1_23446.t1 | 2 | 1 | Ion_trans | 239 | 415 | 2.0e-08 | 33.7 | 6.8e-11 | 3.9e-08 | 32.8 |
| pfu_aug2.0_97.1_23446.t1 | 1 | 1 | Ion_trans_2 | 352 | 419 | 2.3e-10 | 40.0 | 4.0e-13 | 2.3e-10 | 40.0 |
| pfu_aug2.0_97.1_23446.t1 | 2 | 1 | ABC_membrane | 602 | 869 | 0.0 | 177.8 | 1.1e-28 | 6.1e-26 | 91.4 |
| pfu_aug2.0_97.1_23446.t1 | 3 | 1 | ABC_tran | 766 | 789 | 0.0 | 180.9 | 5.4 | 3100.0 | -1.7 |
| pfu_aug2.0_97.1_23446.t1 | 2 | 2 | Ion_trans | 812 | 843 | 2.0e-08 | 33.7 | 1.2 | 700.0 | -0.7 |
| pfu_aug2.0_97.1_23446.t1 | 3 | 2 | ABC_tran | 931 | 1065 | 0.0 | 180.9 | 6.8e-22 | 3.9e-19 | 69.3 |
| pfu_aug2.0_97.1_23446.t1 | 2 | 1 | AAA_25 | 931 | 968 | 6.1e-06 | 25.7 | 0.00013 | 0.072 | 12.4 |
| pfu_aug2.0_97.1_23446.t1 | 2 | 1 | AAA_16 | 937 | 968 | 2.2e-06 | 27.8 | 0.00019 | 0.11 | 12.5 |
| pfu_aug2.0_97.1_23446.t1 | 3 | 1 | SMC_N | 942 | 966 | 1.3e-06 | 27.8 | 0.0049 | 2.8 | 7.1 |
| pfu_aug2.0_97.1_23446.t1 | 2 | 1 | MMR_HSR1 | 944 | 1002 | 2.2e-07 | 30.8 | 2.3e-05 | 0.013 | 15.4 |
| pfu_aug2.0_97.1_23446.t1 | 2 | 1 | Miro | 944 | 982 | 3.9e-06 | 27.3 | 1.5e-05 | 0.0085 | 16.5 |
| pfu_aug2.0_97.1_23446.t1 | 2 | 2 | ABC_membrane | 1200 | 1472 | 0.0 | 177.8 | 5.1e-32 | 2.9e-29 | 102.3 |
| pfu_aug2.0_97.1_23446.t1 | 2 | 2 | AAA_25 | 1531 | 1574 | 6.1e-06 | 25.7 | 0.00027 | 0.15 | 11.4 |
| pfu_aug2.0_97.1_23446.t1 | 3 | 3 | ABC_tran | 1544 | 1692 | 0.0 | 180.9 | 9.4e-34 | 5.4e-31 | 107.7 |
| pfu_aug2.0_97.1_23446.t1 | 2 | 2 | MMR_HSR1 | 1556 | 1576 | 2.2e-07 | 30.8 | 0.00015 | 0.085 | 12.8 |
| pfu_aug2.0_97.1_23446.t1 | 2 | 2 | Miro | 1556 | 1575 | 3.9e-06 | 27.3 | 0.0049 | 2.8 | 8.4 |
| pfu_aug2.0_97.1_23446.t1 | 2 | 2 | AAA_16 | 1557 | 1697 | 2.2e-06 | 27.8 | 0.0002 | 0.11 | 12.4 |
| pfu_aug2.0_97.1_23446.t1 | 3 | 2 | SMC_N | 1558 | 1575 | 1.3e-06 | 27.8 | 0.032 | 18.0 | 4.4 |
| pfu_aug2.0_97.1_23446.t1 | 3 | 3 | SMC_N | 1662 | 1732 | 1.3e-06 | 27.8 | 3.1e-06 | 0.0018 | 17.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_97.1_23446.t1 | gi|676480538|ref|XP_009062092.1| | hypothetical protein LOTGIDRAFT_107213, partial [Lottia gigantea] | 0.0 |
| pfu_aug2.0_97.1_23446.t1 | gi|696979343|ref|XP_009558631.1| | PREDICTED: LOW QUALITY PROTEIN: multidrug resistance-associated protein 1 [Cuculus canorus] | 0.0 |
| pfu_aug2.0_97.1_23446.t1 | gi|60302696|ref|NP_001012540.1| | multidrug resistance-associated protein 1 [Gallus gallus] | 0.0 |
| pfu_aug2.0_97.1_23446.t1 | gi|701345118|ref|XP_009982490.1| | PREDICTED: LOW QUALITY PROTEIN: multidrug resistance-associated protein 1-like, partial [Tauraco erythrolophus] | 0.0 |
| pfu_aug2.0_97.1_23446.t1 | gi|700349315|ref|XP_009918757.1| | PREDICTED: multidrug resistance-associated protein 1 isoform X1 [Haliaeetus albicilla] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_97.1_23446.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_97.1_23446.t1 atggaaaatctagacacgtcagtgacaattaatctaaggggaaccatttttcgtactaatcctgctaaatttcagttgtt tcccaactcgctactggcaaaactgtatgctcctgggcgtggatcaaatgatgaattatactttgacaggaatccggtcc tttttcattacattctcgatttgtatgaaagtggagaccttcatttacccaggaatgtatgctcctcagtacttaaaaaa gaactgaaattctggaacctcagaaaagacaccttaggcaagtgttgtattgggacctattataacgatgacgacgaagt taggatttatggagagtacaggggccttctggaacgaaacacatttgacgatgatgatgatgccaaagattcggaaagag gtggaccgagagatatcagttctaatgcagatagcggtaatatatctgaaacaaaatgtatgagaccgagtagatcagta aggaagcaggtttggaaaatgctctgtgaacctttttctacaagatgctcccagatgtattttgcaacgatattggcaag tgtcgccatttccatcgtggtttttgcggtttcaacgttggaaataggaagacaacatagatacaacaagacgtataatg accttgatgataattctacaaaccacaagataatccttcatttcgaaactcgacaacacagagtactggcagccatagat atagcgtcaaatatgattctaacgacggattatgcgctggttatgtacagtagccctcgtaggtttcgctctttcaggag ctggtattacttgatggacctattttctcttttatctatctatacagtgaatttcttggaccagaccgacctcatggttc ctttgtttttaaattacacaagttcggttgctgcgtggattgggtttgcttacagctttcgaatgatgcggattttacgg ctcctggccttcagtcaaggatgggttgccctgtattgtacgttcaaatccaaatttcccgacattgccttctttctttt tggctttatggcagtatgtctgatttcggcatcccttttgtattattcggagattttggtagttgattcctttcccaatc ttttcgtggctctatggtgggctgttgtgacactgagcagtgtgggatatggtgaaatcgttccaagcagtacagcaggg caaattattgcggttttcgtcatcatattcggtttgctggtgtgctcgggatgtatctacctcattttatgtaccagaat ctccataaagttgtatccttacctgttaggccacaatgttgaaataatccatgttttggaacccatgacccttgcaatat tcatgattcttgccgataacatggataagtatggtccctatagtaaaggcatgctttgtatagtttggcttggtctgata gctaaacacacattaactatttactcagaatccaaaggcatcatacacaaggggacacctgaggaaaatgcctccttcct atccaaactgactttttcctggatgaatggtttgatgcgacaaggttacagtaaaactctaaagaacagtgacctctatc aactagctagagaaagaactgcagatgacgcatttacatacttcaaaccattctgggacaaggaatacagcaaagttaag agtgatacagtcgctaatttcaccaatgaacgcaaggaatcagaaaaccaagaaaaatccaagagagcggaagccagcgt tcttagagctgttctatttgccttttatccgcttattgcgtacacaattttcctggaacttgtgatcaaatctctacact tcacatatccagtaattctcaagcatatgattcagaaggttgaagatgagaatgcagcactgtggaagggagctgcttat gccatagcgatgttttgtctgaatatgaccagtactctggttgggaaccacctgggtcatcataatatacattttgaata cagactgaagggggctttgatgtcctgcatatacaaaaaaatgctgagaatgtcccatgctgccagaaagtcctctactg tgggagaaatagtcaatttgatgtctgtagatagtggtagatttgtcacaatggtgcactggatcaacaatatctggttg tgtcccctccaggttatcattgcaatgtgcttcctctggacagagatgggagctagtgctatagcaggattcctaaccat agctgtattcctaccagctcacacgatactggctaaaaagacaaaagttcttcatgaacagttatctgacacaaaagatt cccgaatcaagctgatgaacgaaattctaaatggtataaaggttatgaagttgtacacttgggaagagtccttcgagaag aaagtacaagtcatccgcgaaaaagaaatctctttgatgagaaaaatcaaaatctgggattcaatcagcacgctgatatg gcacatcggtccattcttggtttctctgtccacttttgccttatacatactcggtgacgacagccacttgttgactgcgg agaaagcgtttgtttccatatcaattttccacactctaagctgggctatgtctgctattcctcacaccattaatggcata aatatgggatttgtgtctctaaaaagaatcagaacatttttaaacaacgaagaactcgataatgacgtcataacaagagg aatagagaatgattcagctatttctgttatcgatgccacattttcttgggacaagaaagaagcgccaattttaaaggaca taactttagagataccggaaggttccttggtcgccattgttggttccgtgggagccgggaagtcttctttgttgtcagct ttcctgggtgaaatgagtaaaacttcaggaacaattaacatcaagggttctacagcatatattgctcagcaagcttggat ccaaaatggcacccttaagaataatatactgtttggtcgttctaatgatcaaggtctctacaataaggtcgtggatgcat gcgctttaatacctgatatcgaaattcttcctggcggaaatatggctgaaataggcgagaagggagtaaatctaagtgtt ggacaaaagcaaagagtgaatttggcacgagccgtctaccaagactgcgatatttacctgtttgatgaccctctcagcgc agttgactcgcatgtcggcaagcatatattcgataacgtcataggtccaaacggaatcctgaaaaacaagacaagggttc ttgttacccatggtattcacttccttcctaaagttgacaaaatcatcacccttgataacggatttatatcagaagtcgga agctatgaggaattaaaaaccgggtcattttcgcagttcttgaaaacatacatgaaaaatgatggctcgaccaacagtga tagcgaagaggaagatgacatcaacccaatagacaataaatcagaaaaagaggtatgccagtctcaacatttgaaggagg caaaggatgatgattcaaaggttgttggcgaagaagatgtagaaactggagagcatctgagtgtggggatgtatctatgt gtcttcatattcctgtcatacgtggtttaccaaagcacagatgtgtactctacgtactggctgagtgaatggacgactga cgtgggtaaaacggtgaccatgcacgctaatgataatacaacgtatcatgacaatcaacggtattacagactggcaggtt acggaatctttggacttttcaaagcaacattagcgtttttacaagcaattctagtatttcttggaggcttagttgctagc agaactctccatcagaaattactacgcaatgtattggcttcgccaatgagctttttcgaaacaaatcctgtcggacgaat tgtgactagatttagtaaagatatcgagacaattgattggctgtcacacgagctgaaagaatactctgaatgtcttacga aaatgataatgatacccattgtgattgggtataatataccctggtttctggtcgtgttgcttccagtctttttcattttc aaatcattacagaaattccataatccaacaactaggcaactgaagcgattagaatccgccaacaagtctccaatgtatac ccacttcagcgagtccataaatggggtgtccacaatacgtgcatatcaagaacaagacagatttgcttcggaatccagac aaagaatcgatgcatatcataagagtttgttcagtttgatcaacgttcacagatgggttggtattcgtgtagaactgata gctatttccttagacttaattgcagccttacttgccattctctctagagacgtactttcaactggaataatagcattgtg tattacctacacgatggatgcaacagggacattaaactggtttatgcactgttcccttaacacggaagaaaagctcattt cagtagaaaggatcaatgagtacatggaaaagccaaccgaggctgcatggactatcgaggaaaagaaaccaaatgcagca tggccagccacgggaaaagtcacattcaagaattatcagacaaagtacagagacgaactggacttggtcctcaaggggat atcatgtgacattaatcccggagagaaggtcggcattgtgggaagaactggtgctggtaaatcatccttgaccatggcgt tgttccgtatcattgaaagtacgacaggaagcatcatcattgatgacatagatatctccactataggacttcatgatcta agatcaaagctcacaattattccacaggacccagttatcttctccggtacactgagaatgaacttggaccctttcgaaca ccattccgatgatgagttatggaaagcattagaacactctcatcttagcaaatttgtagcgtcactaccaaacaaattgc aacatgagtgttcggaaggtggtgaaaatctaagcgttggccagcgtcagcttttatgtctagcacgtgcacttctgaag aagaccaaaatcctgattttggacgaagctacagcagcagttgacttggaaacagatgaattgatacagaagacaattag aactcagttctctgactgtaccattctaacaatagctcacagattgaacacaatcatggattatacaagagttatggtgc tctctagtggtaaaatacacgaattcgacactcccacaaaccttttatcaaacaccaaaagtgttttctatggtatggca aaggatgcaaaccttgtttga |
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Protein
| Protein ID | pfu_aug2.0_97.1_23446.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_97.1_23446.t1 MENLDTSVTINLRGTIFRTNPAKFQLFPNSLLAKLYAPGRGSNDELYFDRNPVLFHYILDLYESGDLHLPRNVCSSVLKK ELKFWNLRKDTLGKCCIGTYYNDDDEVRIYGEYRGLLERNTFDDDDDAKDSERGGPRDISSNADSGNISETKCMRPSRSV RKQVWKMLCEPFSTRCSQMYFATILASVAISIVVFAVSTLEIGRQHRYNKTYNDLDDNSTNHKIILHFETRQHRVLAAID IASNMILTTDYALVMYSSPRRFRSFRSWYYLMDLFSLLSIYTVNFLDQTDLMVPLFLNYTSSVAAWIGFAYSFRMMRILR LLAFSQGWVALYCTFKSKFPDIAFFLFGFMAVCLISASLLYYSEILVVDSFPNLFVALWWAVVTLSSVGYGEIVPSSTAG QIIAVFVIIFGLLVCSGCIYLILCTRISIKLYPYLLGHNVEIIHVLEPMTLAIFMILADNMDKYGPYSKGMLCIVWLGLI AKHTLTIYSESKGIIHKGTPEENASFLSKLTFSWMNGLMRQGYSKTLKNSDLYQLARERTADDAFTYFKPFWDKEYSKVK SDTVANFTNERKESENQEKSKRAEASVLRAVLFAFYPLIAYTIFLELVIKSLHFTYPVILKHMIQKVEDENAALWKGAAY AIAMFCLNMTSTLVGNHLGHHNIHFEYRLKGALMSCIYKKMLRMSHAARKSSTVGEIVNLMSVDSGRFVTMVHWINNIWL CPLQVIIAMCFLWTEMGASAIAGFLTIAVFLPAHTILAKKTKVLHEQLSDTKDSRIKLMNEILNGIKVMKLYTWEESFEK KVQVIREKEISLMRKIKIWDSISTLIWHIGPFLVSLSTFALYILGDDSHLLTAEKAFVSISIFHTLSWAMSAIPHTINGI NMGFVSLKRIRTFLNNEELDNDVITRGIENDSAISVIDATFSWDKKEAPILKDITLEIPEGSLVAIVGSVGAGKSSLLSA FLGEMSKTSGTINIKGSTAYIAQQAWIQNGTLKNNILFGRSNDQGLYNKVVDACALIPDIEILPGGNMAEIGEKGVNLSV GQKQRVNLARAVYQDCDIYLFDDPLSAVDSHVGKHIFDNVIGPNGILKNKTRVLVTHGIHFLPKVDKIITLDNGFISEVG SYEELKTGSFSQFLKTYMKNDGSTNSDSEEEDDINPIDNKSEKEVCQSQHLKEAKDDDSKVVGEEDVETGEHLSVGMYLC VFIFLSYVVYQSTDVYSTYWLSEWTTDVGKTVTMHANDNTTYHDNQRYYRLAGYGIFGLFKATLAFLQAILVFLGGLVAS RTLHQKLLRNVLASPMSFFETNPVGRIVTRFSKDIETIDWLSHELKEYSECLTKMIMIPIVIGYNIPWFLVVLLPVFFIF KSLQKFHNPTTRQLKRLESANKSPMYTHFSESINGVSTIRAYQEQDRFASESRQRIDAYHKSLFSLINVHRWVGIRVELI AISLDLIAALLAILSRDVLSTGIIALCITYTMDATGTLNWFMHCSLNTEEKLISVERINEYMEKPTEAAWTIEEKKPNAA WPATGKVTFKNYQTKYRDELDLVLKGISCDINPGEKVGIVGRTGAGKSSLTMALFRIIESTTGSIIIDDIDISTIGLHDL RSKLTIIPQDPVIFSGTLRMNLDPFEHHSDDELWKALEHSHLSKFVASLPNKLQHECSEGGENLSVGQRQLLCLARALLK KTKILILDEATAAVDLETDELIQKTIRTQFSDCTILTIAHRLNTIMDYTRVMVLSSGKIHEFDTPTNLLSNTKSVFYGMA KDANLV |
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