Gene
| Gene Model ID | pfu_aug2.0_97.1_23438 |
|---|---|
| Locus | scaffold97.1 : 176608 ... 208624 : - |
| To GenomeBrowser | scaffold97.1:176608..208624 |
| Genes list of scaffold | scaffold97.1 |
| Synonym | pfu_aug1.0_19638.1_40170 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_97.1_23438.t2 | 1 | 1 | RabGAP-TBC | 143 | 436 | 3.3e-30 | 105.1 | 4.9e-33 | 7.3e-29 | 100.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_97.1_23438.t2 | gi|585706954|ref|XP_006823900.1| | PREDICTED: TBC1 domain family member 5-like isoform X1 [Saccoglossus kowalevskii] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_97.1_23438.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_97.1_23438.t1 atgttcgctcgtatgaagcagaagcagggaaaagcagaaaaggggccgaaaatgtcaaataaagtgccacctaccaagga ggacataatgagcacgttagataattatgaaagggaaccagaggatattccaaagaaagtcttcgcaaagggtagtgaag acaacaacaacacagagtgcgaaaacggtgttaatcatattccgtcagagacaaagcgacgtttaagcacggggagtaca gggtcagatatgggacggaggaacagccagggtagtgtggcctcagaggaatgggagcacatggagcctggtagtgtcag ccattctaactcgtacagcaaagaatgggagagattattcaccaagccaaactaccgtaaacttctacgggattacgcaa taagtggtaacctgagaagtagtagattccgcagtgtgtgctggaagatattcctggatgttctacctgacgatatttca ctgtggatcaaaaggatgagggagtggaggaaaaaatataacgacctcaaacgaaatttaatagtgaatccccatcatgc ggtagatcctctgacgtcagatttagctctcaataatccactctcacaagctgacgagagtccgtggaatcagtattttg tggataatgagctgagattaacaataaaacaagatgtgatccgcacctatccacgtattgcgttcttccagtctaaccag gtccggaatctaatggtggacatcctgtttatctatgccaaattaaacacagatatctcttacagacagggtatgcatga agtgttagctccattaatatttgtcctacattgtgatcatcaagcattcctccatgcttcagaagtggaaagtctacatt tgatttcacctgagcacagggagatcatcaaggaagttatggacccagcttatttagagcatgatgcttatgctatgatg agtcagataatgcagacaatagagccatggtacatctccaaggatggtcctatgataaagatgagtgacagtcattcgtc ttccattccatttgcccgtccacaagatctcagctcgtcaaacgtcatagtaacgaaactgacccgtattcaggactaca ttctgaagaagtttgacgtagagctacacagtcatctggagaggctggaaatagctccccaaatttatggaattcgatgg gtgcggctattgtttggtcgagagtttccaatgcaggatctcctggcattatgggatgctatatttgctgatgggatcgg cttcgagctggtggattacatatttgtggccatgttgctgtatataagggatctctatactaacatctctagcggtacta ataaacctaggtttataacctctagttggtcagaattctctaagaagatgcgacccaaaacactgagcatgtcatctagt gagaagggcatgtataaatcgaccagtgtccctatagatctacaaactgaggtttcaccaggtaccccgcagcaccagcc agccaaacgagggtcgtcagcgagcctgtctcacgtagaagacgatatgtcacgtccaatgccgtcaccagccagtatgg ctcgtctggcacccacgacacgctccgtcgactccagtcctgcagtggattataaaggattcccacatgaggaaccttcc atgaacggcagtgttcaacactttgctaccctacccaaaccaaaaggaaagggcaggaaaagttcaaaacaggaacagga gttagaagctgccttgactggactacaaggacaactgaatgagaaagagagcatgtgtcactacgccgccagtaaactgg acattcacattactcgccttcaatctgaaattcttcagcagaaattggaaaatgaggatgaaatattgctggccatagct ggcataaaacaggtaagggatgtcttgagagggacactcaagttttctcaaatggaggatgaagaaattagttttcggga caattattacgtgaaggaaatctcatcaactccagattctgaccaatcagaacccacagaaataacacatgatcaagcat cagccaatcagagccaggataagagcaaattgttttatatgagcagtgaggagaattcaactgccaattcacctactgat actatgaagggaaccattacaaatagtaacgctatgaaatcacaaggtacaaaaacagagtcaaagatggactcttatag tgaaccaaaaaattttgagctcaaggactaccggagtgataaatatagatcatggtcggatagtaaatgggactacaggc ctgaaggatcaaggtcaaggtcaaagagtaaaaataattctacagatgnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnaaaagtcaagggtagatgagaggtcaagggcatacagtgatggatatt caaagcaattaagaaatgtagctctagagcctgtgacagacagtataaggaacatagggattacattggaaagccctaac ccattatataggagagtaacagaggaaagccctaattctgtgtacataggacctagtgaagatagtccaaatccattgta tagaagggaaccttgggactaa |
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| Transcript ID | pfu_aug2.0_97.1_23438.t2 |
| Definition | - |
>pfu_aug2.0_97.1_23438.t2 atgttcgctcgtatgaagcagaagcagggaaaagcagaaaaggggccgaaaatgtcaaataaagtgccacctaccaagga ggacataatgagcacgttagataattatgaaagggaaccagaggatattccaaagaaagtcttcgcaaagggtagtgaag acaacaacaacacagagtgcgaaaacggtgttaatcatattccgtcagagacaaagcgacgtttaagcacggggagtaca gggtcagatatgggacggaggaacagccagggtagtgtggcctcagaggaatgggagcacatggagcctggtagtgtcag ccattctaactcgtacagcaaagaatgggagagattattcaccaagccaaactaccgtaaacttctacgggattacgcaa taagtggtaacctgagaagtagtagattccgcagtgtgtgctggaagatattcctggatgttctacctgacgatatttca ctgtggatcaaaaggatgagggagtggaggaaaaaatataacgacctcaaacgaaatttaatagtgaatccccatcatgc ggtagatcctctgacgtcagatttagctctcaataatccactctcacaagctgacgagagtccgtggaatcagtattttg tggataatgagctgagattaacaataaaacaagatgtgatccgcacctatccacgtattgcgttcttccagtctaaccag gtccggaatctaatggtggacatcctgtttatctatgccaaattaaacacagatatctcttacagacagggtatgcatga agtgttagctccattaatatttgtcctacattgtgatcatcaagcattcctccatgcttcagaagtggaaagtctacagg agatcatcaaggaagttatggacccagcttatttagagcatgatgcttatgctatgatgagtcagataatgcagacaata gagccatggtacatctccaaggatggtcctatgataaagatgagtgacagtcattcgtcttccattccatttgcccgtcc acaagatctcagctcgtcaaacgtcatagtaacgaaactgacccgtattcaggactacattctgaagaagtttgacgtag agctacacagtcatctggagaggctggaaatagctccccaaatttatggaattcgatgggtgcggctattgtttggtcga gagtttccaatgcaggatctcctggcattatgggatgctatatttgctgatgggatcggcttcgagctggtggattacat atttgtggccatgttgctgtatataagggatctctatactaacatctctagcggtactaataaacctaggtttataacct ctagttggtcagaattctctaagaagatgcgacccaaaacactgagcatgtcatctagtgagaagggcatgtataaatcg accagtgtccctatagatctacaaactgaggtttcaccaggtaccccgcagcaccagccagccaaacgagggtcgtcagc gagcctgtctcacgtagaagacgatatgtcacgtccaatgccgtcaccagccagtatggctcgtctggcacccacgacac gctccgtcgactccagtcctgcagtggattataaaggattcccacatgaggaaccttccatgaacggcagtgttcaacac tttgctaccctacccaaaccaaaaggaaagggcaggaaaagttcaaaacaggaacaggagttagaagctgccttgactgg actacaaggacaactgaatgagaaagagagcatgtgtcactacgccgccagtaaactggacattcacattactcgccttc aatctgaaattcttcagcagaaattggaaaatgaggatgaaatattgctggccatagctggcataaaacaggtaagggat gtcttgagagggacactcaagttttctcaaatggaggatgaagaaattagttttcgggacaattattacgtgaaggaaat ctcatcaactccagattctgaccaatcagaacccacagaaataacacatgatcaagcatcagccaatcagagccaggata agagcaaattgttttatatgagcagtgaggagaattcaactgccaattcacctactgatactatgaagggaaccattaca aatagtaacgctatgaaatcacaaggtacaaaaacagagtcaaagatggactcttatagtgaaccaaaaaattttgagct caaggactaccggagtgataaatatagatcatggtcggatagtaaatgggactacaggcctgaaggatcaaggtcaaggt caaagagtaaaaataattctacagatgnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnaaaagtcaagggtagatgagaggtcaagggcatacagtgatggatattcaaagcaattaagaaatgtag ctctagagcctgtgacagacagtataaggaacatagggattacattggaaagccctaacccattatataggagagtaaca gaggaaagccctaattctgtgtacataggacctagtgaagatagtccaaatccattgtatagaagggaaccttgggacta a |
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Protein
| Protein ID | pfu_aug2.0_97.1_23438.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_97.1_23438.t1 MFARMKQKQGKAEKGPKMSNKVPPTKEDIMSTLDNYEREPEDIPKKVFAKGSEDNNNTECENGVNHIPSETKRRLSTGST GSDMGRRNSQGSVASEEWEHMEPGSVSHSNSYSKEWERLFTKPNYRKLLRDYAISGNLRSSRFRSVCWKIFLDVLPDDIS LWIKRMREWRKKYNDLKRNLIVNPHHAVDPLTSDLALNNPLSQADESPWNQYFVDNELRLTIKQDVIRTYPRIAFFQSNQ VRNLMVDILFIYAKLNTDISYRQGMHEVLAPLIFVLHCDHQAFLHASEVESLHLISPEHREIIKEVMDPAYLEHDAYAMM SQIMQTIEPWYISKDGPMIKMSDSHSSSIPFARPQDLSSSNVIVTKLTRIQDYILKKFDVELHSHLERLEIAPQIYGIRW VRLLFGREFPMQDLLALWDAIFADGIGFELVDYIFVAMLLYIRDLYTNISSGTNKPRFITSSWSEFSKKMRPKTLSMSSS EKGMYKSTSVPIDLQTEVSPGTPQHQPAKRGSSASLSHVEDDMSRPMPSPASMARLAPTTRSVDSSPAVDYKGFPHEEPS MNGSVQHFATLPKPKGKGRKSSKQEQELEAALTGLQGQLNEKESMCHYAASKLDIHITRLQSEILQQKLENEDEILLAIA GIKQVRDVLRGTLKFSQMEDEEISFRDNYYVKEISSTPDSDQSEPTEITHDQASANQSQDKSKLFYMSSEENSTANSPTD TMKGTITNSNAMKSQGTKTESKMDSYSEPKNFELKDYRSDKYRSWSDSKWDYRPEGSRSRSKSKNNSTDXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKSRVDERSRAYSDGYSKQLRNVALEPVTDSIRNIGITLESPN PLYRRVTEESPNSVYIGPSEDSPNPLYRREPWD |
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| Protein ID | pfu_aug2.0_97.1_23438.t2 |
| Definition | - |
>pfu_aug2.0_97.1_23438.t2 MFARMKQKQGKAEKGPKMSNKVPPTKEDIMSTLDNYEREPEDIPKKVFAKGSEDNNNTECENGVNHIPSETKRRLSTGST GSDMGRRNSQGSVASEEWEHMEPGSVSHSNSYSKEWERLFTKPNYRKLLRDYAISGNLRSSRFRSVCWKIFLDVLPDDIS LWIKRMREWRKKYNDLKRNLIVNPHHAVDPLTSDLALNNPLSQADESPWNQYFVDNELRLTIKQDVIRTYPRIAFFQSNQ VRNLMVDILFIYAKLNTDISYRQGMHEVLAPLIFVLHCDHQAFLHASEVESLQEIIKEVMDPAYLEHDAYAMMSQIMQTI EPWYISKDGPMIKMSDSHSSSIPFARPQDLSSSNVIVTKLTRIQDYILKKFDVELHSHLERLEIAPQIYGIRWVRLLFGR EFPMQDLLALWDAIFADGIGFELVDYIFVAMLLYIRDLYTNISSGTNKPRFITSSWSEFSKKMRPKTLSMSSSEKGMYKS TSVPIDLQTEVSPGTPQHQPAKRGSSASLSHVEDDMSRPMPSPASMARLAPTTRSVDSSPAVDYKGFPHEEPSMNGSVQH FATLPKPKGKGRKSSKQEQELEAALTGLQGQLNEKESMCHYAASKLDIHITRLQSEILQQKLENEDEILLAIAGIKQVRD VLRGTLKFSQMEDEEISFRDNYYVKEISSTPDSDQSEPTEITHDQASANQSQDKSKLFYMSSEENSTANSPTDTMKGTIT NSNAMKSQGTKTESKMDSYSEPKNFELKDYRSDKYRSWSDSKWDYRPEGSRSRSKSKNNSTDXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKSRVDERSRAYSDGYSKQLRNVALEPVTDSIRNIGITLESPNPLYRRVT EESPNSVYIGPSEDSPNPLYRREPWD |
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