Gene
| Gene Model ID | pfu_aug2.0_97.1_23437 |
|---|---|
| Locus | scaffold97.1 : 167945 ... 176602 : + |
| To GenomeBrowser | scaffold97.1:167945..176602 |
| Genes list of scaffold | scaffold97.1 |
| Synonym | pfu_aug1.0_10026.1_38985 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_97.1_23437.t1 | 2 | 1 | Lectin_C | 13 | 110 | 3.5e-07 | 30.8 | 6.8e-07 | 0.0017 | 18.9 |
| pfu_aug2.0_97.1_23437.t1 | 3 | 1 | WSC | 69 | 142 | 1.9e-08 | 34.1 | 7.5e-12 | 1.9e-08 | 34.1 |
| pfu_aug2.0_97.1_23437.t1 | 3 | 2 | WSC | 191 | 200 | 1.9e-08 | 34.1 | 6.0 | 15000.0 | -4.4 |
| pfu_aug2.0_97.1_23437.t1 | 2 | 2 | Lectin_C | 204 | 304 | 3.5e-07 | 30.8 | 4.4e-06 | 0.011 | 16.3 |
| pfu_aug2.0_97.1_23437.t1 | 3 | 3 | WSC | 306 | 320 | 1.9e-08 | 34.1 | 2.5 | 6200.0 | -2.8 |
Transcript
| Transcript ID | pfu_aug2.0_97.1_23437.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_97.1_23437.t1 atggaatttggagcgaaggaactcgtgtactttagtgaagctaaaacctgggttgaggcacgttctatttgccggagcat gaacggtcaactaatgatgagcaatgccttaaatagagatattatcaacagttgctcggagatagatactaatcagagat tttgggttggagagtataaaacattgtctccttggtttgagattataggttgctttgccaagacggacgtacaatacaac gagacgtacgacaacagtttccgtaatgaggtgtccgtctgtcacagagtctgtaatacaacatacataggactacagga taagatgtgttactgtataaatgaggactttaacggcatacagaacagcgcctcgtcttcgtgtaacatcgtctgcgacg gaaacagcgccgagtactgtggcggaaatgacgtcatgaatgtataccgtacagccagatacattccaacagaggatata tgtccttttggggacatctgcttgtgctcccaaatggactgtcagctcacaggcgtggcttacacggccagaccatgcca ggagcgtatgcagggggcatgtggagactgggtggtcaatagtgttccggacagctggtcagcaagcaatgaacgctgca gtcaacaagggtatctgaccaatcaggataactctctctcattctgcgaaaatcggcagttttcgtctcccgagtcgttc tgggtaggagttttccgaagtgcaattcacaactatgatcaaaataagaacaaagacgcccagctcagtgtggaagatga gaagttgttgtattgtttcacattgacgaaaggcgtcatttatgatagcacacgtagtgacgccagggaaatggacgcct gttataacaaacgtttaccttttgtatgcgaaattggtgtctcaacattcggtcaggcatcctgctccctttttacaacg ccatctacaacgtcaacaacaacagaaacgacaactcctgctgtacaaaattctacatacgtcatggggcgaaacgacaa aaaggatattgtagatataggtattataatagccttagctacaggatctggattggtactgctgcttatagtattactta tctgtgttgtacagaaacggagagacaacaattacaaacggaagtataagactccttacgtcatcaattcttttggtaaa gatgtgaacatcgactctccgcaaaagaagagaaagcgttaccatggtaacgaaacacaaccaaaagagcccaaaaattc tccacttatcagtcgtcaagaaatgaagaaaaatcgagaaaagcagaagctccaaggcgcacccgataaaattatttacg gaacccccataaaaagactgccgaaattgatggagacggaaatatacgtcgtatcatcggactgtgacgaatcagaggta attccacggtcacgccccaaaaaaggaatcatgaaaaaagcacctaagagtgttcgaatagacgcgaaatttggtgacga ttccggtattgaagaatcacatgaccaaaggagaatttacgacgctgacaacagttcatattcggaggactcgttgagga aagtgaaagttgataaattacaaannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnccaatggagctcctga |
|
Protein
| Protein ID | pfu_aug2.0_97.1_23437.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_97.1_23437.t1 MEFGAKELVYFSEAKTWVEARSICRSMNGQLMMSNALNRDIINSCSEIDTNQRFWVGEYKTLSPWFEIIGCFAKTDVQYN ETYDNSFRNEVSVCHRVCNTTYIGLQDKMCYCINEDFNGIQNSASSSCNIVCDGNSAEYCGGNDVMNVYRTARYIPTEDI CPFGDICLCSQMDCQLTGVAYTARPCQERMQGACGDWVVNSVPDSWSASNERCSQQGYLTNQDNSLSFCENRQFSSPESF WVGVFRSAIHNYDQNKNKDAQLSVEDEKLLYCFTLTKGVIYDSTRSDAREMDACYNKRLPFVCEIGVSTFGQASCSLFTT PSTTSTTTETTTPAVQNSTYVMGRNDKKDIVDIGIIIALATGSGLVLLLIVLLICVVQKRRDNNYKRKYKTPYVINSFGK DVNIDSPQKKRKRYHGNETQPKEPKNSPLISRQEMKKNREKQKLQGAPDKIIYGTPIKRLPKLMETEIYVVSSDCDESEV IPRSRPKKGIMKKAPKSVRIDAKFGDDSGIEESHDQRRIYDADNSSYSEDSLRKVKVDKLQXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQWSS |
|