Gene
| Gene Model ID | pfu_aug2.0_97.1_23434 |
|---|---|
| Locus | scaffold97.1 : 75386 ... 91967 : + |
| To GenomeBrowser | scaffold97.1:75386..91967 |
| Genes list of scaffold | scaffold97.1 |
| Synonym | pfu_aug1.0_302.1_29172 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_97.1_23434.t1 | 1 | 1 | MMR_HSR1 | 37 | 121 | 3.1e-07 | 30.3 | 1.0e-09 | 1.1e-06 | 28.6 |
| pfu_aug2.0_97.1_23434.t1 | 1 | 1 | Asp_protease_2 | 411 | 487 | 4.6e-09 | 36.6 | 1.7e-11 | 1.8e-08 | 34.7 |
| pfu_aug2.0_97.1_23434.t1 | 1 | 1 | RVT_1 | 738 | 898 | 3.0e-20 | 72.4 | 5.3e-23 | 5.7e-20 | 71.6 |
Transcript
| Transcript ID | pfu_aug2.0_97.1_23434.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_97.1_23434.t1 atgaaaaagtataaagatataatggaagacagagacgaaaaacttcgtttatttcatgaaatgataaaaatcccccttgg tgtaaatgacgagagagggaagacgctccacgtggcatttataggtctaccaggatcaggtaaatcatctcttatcaact ccatgataactgcaatatcaaaagatggaaggtgggacgagtggtctcccgttggctttacacgtgacggtagccatgtt acaccggcagtgatacggtacccaaaagaaagatatttgtggagagaaccagattttctagtacagaactacccgacctt tgttgacgtccctggattgtgtgaagatgatgatgaggacttccaaaaggaacttcttcgacttgttatatttggtaaat tgagggatgatgatgactatagagaaatattcaggtattataggcagcaatgcgatcattataaagaaatatttgtacga gatgaaggaagagatagggagatcagagagtatggattaggaatgctgagggagagatacgctagccgagacactagata caaagtggatagagttgttatcgtgtccacgtgcaaagaagacgatagactgccaggcaaactcattgatacagttaaaa gcgtatgcggagaggaggctaggagaattcagctatttggagtactaactcaccgagatcaaactggtcattcttacgaa gaacgtgagaacgagttcttgagggcgttaggaattccgagaacccgctttgtcagctgtttatgtcactgcgatgacta tgcaagggaagtggagagatgtctccttcgtggaaggtttccggaactggatatcccgatactagaattcataacatctg tttgcaacccgacaacacttatcttgaacgacaaaatggtctacaaaggacatggcattggaatactttcaaagatcaaa gcaatgccgacagactttatattctaccacgcagttatttttggtttaatggtacttctgttcagcgccctcaccatgac ggcgaatatccagccgtttacctgggatgaactagataacgcttgcagcgaattacacaatatcaatcaaccgaagcttg agatcgatgacattactagcgaaaacgaaactaatgtcaaatcattagaagtacagcttgacacgccgatccatcatttg aatgctacttccgactcttgtctattcagtcaagtttcaataaataacaataagttcaatttcgtcatcgacaccggtag tttattaacgatagtttcattagctgtttttcatcggttggatattgcaacgtctgccttgcggatcagcaatatcaaca tccgcacggctgatggcaactcattagaagtttttggaactttagatcttacatttaaacttggcacacacacatttaca caaaatgtagttattgcaaagttagacaatttatctggtattttttggatagattttctagaagcaaacgacatgataat tttcataaatgacaggtgtttggttagtcctacgaacaccattcctctttttaaatatggcgaagggaaatgttgtgtca gaattagaatgaattcgcccgtagaagtcccagcccaatcagaaatgattattgaagggtatgtccaaggtcaaatgggt aaaacgtttggactcgtggaatcaactcaagatttacaaagcaaatggttattaatatcaaaatcccttgtcaaaactga tggcaaccatgttgctatatcagttctaaatcttagaaaatacccccaaaccctagatagcgatcaggttttaggtaaat tccaacctgtagatgaagtcgtcaaaccagaaaatgaacagaaaaatgaacatgacaatgaatgctccctcccagatcat ttgtctaaacttttagaaggtgcctcggacaatttgtctacagaagaaagaagtcagtttaaaatccttttgttcaaata ccagcacatttttgcagctcctaattgtagagtgggtcaaacttctctggtacaaaataggattgacacaggggattccc cacccgttaaggttcctcaacgcaggctacctgcaactcagaggaaaattgtggaacaagaactttcaaaaatgattgaa aatgaaatcgttgagccaagtaacagtccctgggcttccccaatttgtttagtcagaaagaaagatcaaacatatagatt ttgtattgatttccgtagacttaatgcaatcacaaagaaagatgcctacccactcccaagagtagatgattttttagaat cactttcagggtgcgcatatttttcaactttagatctagctcaagggtactggcaatgtaaaatggccgattctgacaaa cataagactgcgttcagtacccataaagggttatatcatttcaatgtaatgcctttcggtctatgcaatgccccagcgtc ctttcaaagactaatggaaaatgtcttgggaaatcttgcatgggagaaatgcctttgttatcttgacgatatcatcattt atggtagaacattttcagaagccaaacagaacttagaacttgtttttgaatgttttagaaaggcaaatttgaaattaaag ccttcaaaatgtcatctttttctgaaagaagtttcatttttgggacacgtagtttctgcaaaaggtgttcagtgtgaccc atctaaaactgaagaagttaaatcttggcccagatctcaaaatgtcaaagaagttgcaggatattacagacgttttatta caaatttttcggccatctcatttcccttgaacagattaatgcgtaagaaacagccatttgtatgggataatagttgtgag tcggctttcgtaaagcttaaacaactactgaactcatcccctattctggcttttcccactgaaaacgaacctttcatttt agatactgacgccagtttaacggggttatcaggatataacagacgttttattccaaatttttcggccatctcatttccct tgaacagattaatgcgtaagaaacagccatttgtatgggatgatagttgtgagtcggctttcgtaaagcttaaacaatta ctgacctcatcccctattctggcttttcccactgaaaatgaacctttcattttagatactgacgccagtttaacgggtat aggtgcacttttgtctcaagtacagaatgatgaagaggttgtcatagcctatgcaagtaaatcattaaacaaaagtcaaa gacgttattgtaccacaaacagagaattacttgctgttggcacatttgtcagacattttcgacactttttgctaggtaga cacttcactataagatcagatcatgcttcactagtttggctaagaaatttcaaaggtgtcgtagctcgatggattagtat ccctgatacattcgactacgaattacaatacagaaagggtgaaaaccatgttaaagcagatagtctgtctagagtttcac atcgaaaatgcaagagattagattgtcctgattgtatttctctagtttctgacaaaaaggaagtcaatgatgcagtgaca tacgtcaatctcagatctgaccaatcaaaggagactctgtctaactgggttcagtcttggtcacatgatgacattaggca aatgcaatctaatgatttggttataggaccattcattgaacctaaagaaaagtttaaaaagaaacctgacaggtccgttg taaaacttatgagccaaaacattagattaatgtattccatgtgggaaacatttgaaattcaaaagggtattttatacaga aattttgacacagaaaatgagaacactcatttacagttagtagctcgtctgacaataagaaatgaaattctcacccagct ctatgacaacaaaccagcaggtcatctagccagagatgactgggataaccatctcccttttattatgatggcttaccgtg ccataccccatgacagtacaatgtgtacaccgaatgagttgattttaggtcgtgaagttcatttaccagtagacatagta gacatacttacttcaccacctcctggtactttggacaactgctgtctaccacagtacgtagagtgggtacagaaatcttt gcaaaattcctttgattttgtattagagaaaacgaattcagttgtcaagcgacaaaaagcttattataataggggtttga aacctagaacatttcaaaaacatgactgggttcggagatactatcctccaaaagcagacaggaagatgagtccttcttgg ataggtccctatttaatcttagagaagctgtcagattacacttacaagatccaaatgaacgaaacatctaaagtcattgt tgcacatgttgatgatcttaagccatgtgaaaacacaaccggttttataaattgggacacctataaagatgaaatagata aaaacacacaaaacacagaagtgactgatgctgactcagacacactagatcaaaatacagaaaatatcaagcaacaagat gaaccaccaaaaacatccagatatggcagaatgttaaaacctaaccccagatattcagactag |
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Protein
| Protein ID | pfu_aug2.0_97.1_23434.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_97.1_23434.t1 MKKYKDIMEDRDEKLRLFHEMIKIPLGVNDERGKTLHVAFIGLPGSGKSSLINSMITAISKDGRWDEWSPVGFTRDGSHV TPAVIRYPKERYLWREPDFLVQNYPTFVDVPGLCEDDDEDFQKELLRLVIFGKLRDDDDYREIFRYYRQQCDHYKEIFVR DEGRDREIREYGLGMLRERYASRDTRYKVDRVVIVSTCKEDDRLPGKLIDTVKSVCGEEARRIQLFGVLTHRDQTGHSYE ERENEFLRALGIPRTRFVSCLCHCDDYAREVERCLLRGRFPELDIPILEFITSVCNPTTLILNDKMVYKGHGIGILSKIK AMPTDFIFYHAVIFGLMVLLFSALTMTANIQPFTWDELDNACSELHNINQPKLEIDDITSENETNVKSLEVQLDTPIHHL NATSDSCLFSQVSINNNKFNFVIDTGSLLTIVSLAVFHRLDIATSALRISNINIRTADGNSLEVFGTLDLTFKLGTHTFT QNVVIAKLDNLSGIFWIDFLEANDMIIFINDRCLVSPTNTIPLFKYGEGKCCVRIRMNSPVEVPAQSEMIIEGYVQGQMG KTFGLVESTQDLQSKWLLISKSLVKTDGNHVAISVLNLRKYPQTLDSDQVLGKFQPVDEVVKPENEQKNEHDNECSLPDH LSKLLEGASDNLSTEERSQFKILLFKYQHIFAAPNCRVGQTSLVQNRIDTGDSPPVKVPQRRLPATQRKIVEQELSKMIE NEIVEPSNSPWASPICLVRKKDQTYRFCIDFRRLNAITKKDAYPLPRVDDFLESLSGCAYFSTLDLAQGYWQCKMADSDK HKTAFSTHKGLYHFNVMPFGLCNAPASFQRLMENVLGNLAWEKCLCYLDDIIIYGRTFSEAKQNLELVFECFRKANLKLK PSKCHLFLKEVSFLGHVVSAKGVQCDPSKTEEVKSWPRSQNVKEVAGYYRRFITNFSAISFPLNRLMRKKQPFVWDNSCE SAFVKLKQLLNSSPILAFPTENEPFILDTDASLTGLSGYNRRFIPNFSAISFPLNRLMRKKQPFVWDDSCESAFVKLKQL LTSSPILAFPTENEPFILDTDASLTGIGALLSQVQNDEEVVIAYASKSLNKSQRRYCTTNRELLAVGTFVRHFRHFLLGR HFTIRSDHASLVWLRNFKGVVARWISIPDTFDYELQYRKGENHVKADSLSRVSHRKCKRLDCPDCISLVSDKKEVNDAVT YVNLRSDQSKETLSNWVQSWSHDDIRQMQSNDLVIGPFIEPKEKFKKKPDRSVVKLMSQNIRLMYSMWETFEIQKGILYR NFDTENENTHLQLVARLTIRNEILTQLYDNKPAGHLARDDWDNHLPFIMMAYRAIPHDSTMCTPNELILGREVHLPVDIV DILTSPPPGTLDNCCLPQYVEWVQKSLQNSFDFVLEKTNSVVKRQKAYYNRGLKPRTFQKHDWVRRYYPPKADRKMSPSW IGPYLILEKLSDYTYKIQMNETSKVIVAHVDDLKPCENTTGFINWDTYKDEIDKNTQNTEVTDADSDTLDQNTENIKQQD EPPKTSRYGRMLKPNPRYSD |
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