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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug2.0_9364.1_16377
Locus scaffold9364.1 : 6288 ... 7638 : -
To GenomeBrowser scaffold9364.1:6288..7638
Genes list of scaffold scaffold9364.1
Synonym pfu_aug1.0_5528.1_09130

Manual annotation
Annotation by Blast2GO
Annotation GO
methylmalonyl- mitochondrial GO:0004493 GO:0005739 GO:0046491

Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug2.0_9364.1_16377.t1 gi|676439768|ref|XP_009048959.1| hypothetical protein LOTGIDRAFT_140877, partial [Lottia gigantea] 3.0e-21
pfu_aug2.0_9364.1_16377.t1 gi|744580318|ref|XP_010983648.1| PREDICTED: methylmalonyl-CoA epimerase, mitochondrial [Camelus dromedarius] 7.0e-20
pfu_aug2.0_9364.1_16377.t1 gi|743747519|ref|XP_010968479.1| PREDICTED: methylmalonyl-CoA epimerase, mitochondrial [Camelus bactrianus] 9.0e-20
pfu_aug2.0_9364.1_16377.t1 gi|395502555|ref|XP_003755644.1| PREDICTED: methylmalonyl-CoA epimerase, mitochondrial [Sarcophilus harrisii] 1.0e-19
pfu_aug2.0_9364.1_16377.t1 gi|731246907|ref|XP_010636515.1| PREDICTED: methylmalonyl-CoA epimerase, mitochondrial [Fukomys damarensis] 1.0e-19

Transcript
Transcript IDpfu_aug2.0_9364.1_16377.t1
Definition-
>pfu_aug2.0_9364.1_16377.t1
gtagacgatatcgaggaggctatgaaagatctgaagtcaaagaatatcagactattaagtgacactgctagaatcggtgc
ccatggaaaacctgtagtgttccttcatccgaaagactgtaatggtgtactggtggaactggaacaagcttga

Protein
Protein IDpfu_aug2.0_9364.1_16377.t1
Definition-
>pfu_aug2.0_9364.1_16377.t1
VDDIEEAMKDLKSKNIRLLSDTARIGAHGKPVVFLHPKDCNGVLVELEQA

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