Gene
| Gene Model ID | pfu_aug2.0_911.1_04680 |
|---|---|
| Locus | scaffold911.1 : 13496 ... 26224 : + |
| To GenomeBrowser | scaffold911.1:13496..26224 |
| Genes list of scaffold | scaffold911.1 |
| Synonym | pfu_aug1.0_12191.1_10427 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_911.1_04680.t1 | 2 | 1 | cNMP_binding | 453 | 551 | 5.6e-18 | 64.5 | 4.8e-16 | 2.4e-12 | 46.5 |
| pfu_aug2.0_911.1_04680.t1 | 2 | 2 | cNMP_binding | 587 | 620 | 5.6e-18 | 64.5 | 3.4e-06 | 0.017 | 14.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_911.1_04680.t1 | gi|676440532|ref|XP_009049207.1| | hypothetical protein LOTGIDRAFT_230973 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_911.1_04680.t1 | gi|585651258|ref|XP_006814718.1| | PREDICTED: cyclic nucleotide-binding domain-containing protein 2-like [Saccoglossus kowalevskii] | 0.0 |
| pfu_aug2.0_911.1_04680.t1 | gi|390339608|ref|XP_003725045.1| | 0.0 | |
| pfu_aug2.0_911.1_04680.t1 | gi|676440836|ref|XP_009049303.1| | hypothetical protein LOTGIDRAFT_231021 [Lottia gigantea] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_911.1_04680.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_911.1_04680.t1 atggatgacgctttcgaagatccagagggcctgggtgctagtggaaataagatagaaaggatcaaacagaatcttagaat catttcaccgactagtcgtaaacttggggcaaagcaaagaagcttcctgaaggagaaaaataataatggcatacaaagag agaacacgtttccaaaccttaggaacaaaaggacattatcagataacaacacatacaacggccggccgtccgagtcctct gggagcctgaatagctcacaagagctgactcggtcactgccattacccgactctgcaaaattaggcaagacaaatcaaca cagacattttctgaggaggatgtcaagtaagaagtcgatgacagcaccagatttgttcaatattcaagaattcaggagtt tacacgaagaaaacatgttaaggaagagattcagggaaattttggcgtttgaaagggttcatacaatgccagttgttgcc gagaaggaacttagtaataagaccaaattcgaaaacttcgctcatatgacccacgacaatgattcgtatatttacgacat agagtcggacatgggtgaggaggaacgtgagagtgtcatgagagcaagaagaaagagtattgaggacacgggactatggc aactagcgtcctcctcagccttcaagtacaaagccatgaaaaatatgaacattgaggacttgtccatggcaatagtggct aaagagcgcatgcgcaagaaaataaacgacaaattaaacgaaaaattagacttacctgatgacccattcaaaagagtggt aattcttagaaacaatgtgaaacatatagaaagaagattccgtagcatggcaacaggtgtatcgtcagaaaactctgctg cccagtctatacatgctctacaaaggaatttgaaccaggatgatgacgctaaaccaaagtttctagtccccggagaggca atgaactttttcagaaaatatgcaagaattgtgcttataatcctaaagtggattgaactcataatggattctgttttgtc attattccccagttctagtgaacaaaacaagttagagagagaactaaaatcattcgtggatattgcaaatgaagttcagc aagaacacgtttcaaagtcaatggacgaatatggactctcatttgataaaaacgcattcaaagccagaaaagagatttca ctgacccaagatcataggaaaactctgacaacgagatggaatttcagaactccagaaatggttaaacaggtgatgcatgg tttacaggcgctcagatctttgtcggaatatcctctaggtacacaggaaaaactctgtcaggtcgcttggtatcaaaccc ttggtccaaagaaggcaatagtcagacaaggtcacaatgcagagtccttctacttcatcctttctggaacagcttttgtt aaaaagatgataacggaccccaaaaccaaagaaacacgattacacacagtggcacgcctgacaaagggacagagttttgg gtattcttgggaagatggggagatcggattgatatttaatacattgaggacagcaacagtagagagtgctacacccatgg aactacttgtcataggaaaagacgattttaacagaatattcatgaacgataatcaagatgaagaagctgaacatgtcaaa ttcctcaggcaagttcctgtgatgcagcattggccaatagaaagcctgagagatgaaccaggaacttgtattttacatta cttcaagcgaggtcagttggtatcagacaatgggaagactagtgaatggctctacttcataaaatcgggatcttgtgaag tactgaaaaaactcaaaaactgtaaggctcgaaaatgtggccaagcagagaggaagccggatcccatgtctgaaatagtg ctaccggttctagttggaagacatgaatgtaaagttgatagtggctatacaagaaaacggcccaaaatctacatgaatac tgatgtatttgaggaaatgaccaaatattacgaatctctaaaaaggcaattgtttctaagagcacactccgaggagggag gagatgggatgacacaggttcacttcccacctctcaatgtaacctcaactcagcaaaatcgtaaagtgtcttttgcagag gataaaattacaggaatagaatcggacaccatagatcaattgtacgaagtcacacaagtgccatctcataacgataaaca ggaaacggaaataatctttgaaccggtcatgcgtataccagcagtttcctgtgaaagtagatttcacaaacctgttacat cggagagtaaatttaacgccgaaaaattcccatggctcaagaaattccaagcacattttatgttacctactcaagctatg ttaaagtcagagactcctcctgataaaccaaaggatgttacgaacgacgaggattatacacggaagaacagcgtttttgt caagatcgagttactgcaatcaaaggatgtttttggcattaacaccctgacgggatggggtagtgaggagatggacgaca tgctgaaggaagcacccgctacatgccttgttagcaaaggagccnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnngagattgtcatgctttctaaaaaggtctttctgaagtattt aacggagggagtgcggagtcacttacgggaaataatcagaccttaccccctggagagaaagatgcaagagaatttccaaa ctactttagattggcaaaactataaaacttctatactcggagacattctaggcaaacatgtgtctgcatcaccaatggat gtacattga |
|
Protein
| Protein ID | pfu_aug2.0_911.1_04680.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_911.1_04680.t1 MDDAFEDPEGLGASGNKIERIKQNLRIISPTSRKLGAKQRSFLKEKNNNGIQRENTFPNLRNKRTLSDNNTYNGRPSESS GSLNSSQELTRSLPLPDSAKLGKTNQHRHFLRRMSSKKSMTAPDLFNIQEFRSLHEENMLRKRFREILAFERVHTMPVVA EKELSNKTKFENFAHMTHDNDSYIYDIESDMGEEERESVMRARRKSIEDTGLWQLASSSAFKYKAMKNMNIEDLSMAIVA KERMRKKINDKLNEKLDLPDDPFKRVVILRNNVKHIERRFRSMATGVSSENSAAQSIHALQRNLNQDDDAKPKFLVPGEA MNFFRKYARIVLIILKWIELIMDSVLSLFPSSSEQNKLERELKSFVDIANEVQQEHVSKSMDEYGLSFDKNAFKARKEIS LTQDHRKTLTTRWNFRTPEMVKQVMHGLQALRSLSEYPLGTQEKLCQVAWYQTLGPKKAIVRQGHNAESFYFILSGTAFV KKMITDPKTKETRLHTVARLTKGQSFGYSWEDGEIGLIFNTLRTATVESATPMELLVIGKDDFNRIFMNDNQDEEAEHVK FLRQVPVMQHWPIESLRDEPGTCILHYFKRGQLVSDNGKTSEWLYFIKSGSCEVLKKLKNCKARKCGQAERKPDPMSEIV LPVLVGRHECKVDSGYTRKRPKIYMNTDVFEEMTKYYESLKRQLFLRAHSEEGGDGMTQVHFPPLNVTSTQQNRKVSFAE DKITGIESDTIDQLYEVTQVPSHNDKQETEIIFEPVMRIPAVSCESRFHKPVTSESKFNAEKFPWLKKFQAHFMLPTQAM LKSETPPDKPKDVTNDEDYTRKNSVFVKIELLQSKDVFGINTLTGWGSEEMDDMLKEAPATCLVSKGAXXXXXXXXXXXX XXXXXXXXXXXXXEIVMLSKKVFLKYLTEGVRSHLREIIRPYPLERKMQENFQTTLDWQNYKTSILGDILGKHVSASPMD VH |
|