Gene
| Gene Model ID | pfu_aug2.0_906.1_21260 |
|---|---|
| Locus | scaffold906.1 : 134909 ... 141605 : - |
| To GenomeBrowser | scaffold906.1:134909..141605 |
| Genes list of scaffold | scaffold906.1 |
| Synonym | pfu_aug1.0_915.1_43847 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| endonuclease v isoform x1 | GO:0004519 GO:0005488 GO:0006259 GO:0090305 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_906.1_21260.t1 | 1 | 1 | Endonuclease_5 | 61 | 196 | 1.10002e-41 | 142.4 | 1.4013e-45 | 1.40004e-41 | 142.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_906.1_21260.t1 | gi|585684483|ref|XP_006812585.1| | PREDICTED: endonuclease V-like [Saccoglossus kowalevskii] | 0.0 |
| pfu_aug2.0_906.1_21260.t1 | gi|676425182|ref|XP_009044311.1| | hypothetical protein LOTGIDRAFT_109560, partial [Lottia gigantea] | 0.0 |
| pfu_aug2.0_906.1_21260.t1 | gi|524886856|ref|XP_005100019.1| | PREDICTED: endonuclease V-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_906.1_21260.t1 | gi|611993666|ref|XP_007482958.1| | PREDICTED: endonuclease V isoform X5 [Monodelphis domestica] | 0.0 |
| pfu_aug2.0_906.1_21260.t1 | gi|611993664|ref|XP_007482957.1| | PREDICTED: endonuclease V isoform X4 [Monodelphis domestica] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_906.1_21260.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_906.1_21260.t1 atggatttttgtgatgattgtggtggagtgaaggacagtagggagtgtggtaagtgtgatagtgatccagtccagcggga agatgtaccacaggatgttaaagacaaatgggagaaggaacaagatgagctgaagaagaaactgatccttgaagatgcac cagttatacaggagatgaaagaatctatggagcataacaaagatatgaagttctacattggaggagttgacatatcattt gttaaaggagaccttgtcaatgcctgctcagcctttgttgtttgtagtttcccagatcttgagaaagtatacgaggacta tgagatggtaaagctaacacagccttatataccgggttacctggccttcagagaggtggactttatgattcaacagtaca acaaactgaaaacacggaaaccagaatatctaccccatgttataatggtagatggtaatggcatcatacacccaaaagaa tttgggtgtgcctgccagcttggtgttcttttggacataccctgtattggatcagctaagaaactgttccaagtagatgg actggagaaagatgaacatcatcaggagaagtga |
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Protein
| Protein ID | pfu_aug2.0_906.1_21260.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_906.1_21260.t1 MDFCDDCGGVKDSRECGKCDSDPVQREDVPQDVKDKWEKEQDELKKKLILEDAPVIQEMKESMEHNKDMKFYIGGVDISF VKGDLVNACSAFVVCSFPDLEKVYEDYEMVKLTQPYIPGYLAFREVDFMIQQYNKLKTRKPEYLPHVIMVDGNGIIHPKE FGCACQLGVLLDIPCIGSAKKLFQVDGLEKDEHHQEK |
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