Gene
| Gene Model ID | pfu_aug2.0_906.1_21256 |
|---|---|
| Locus | scaffold906.1 : 38629 ... 54875 : - |
| To GenomeBrowser | scaffold906.1:38629..54875 |
| Genes list of scaffold | scaffold906.1 |
| Synonym | pfu_aug1.0_915.1_43851 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_906.1_21256.t1 | 2 | 1 | FRG1 | 81 | 190 | 0.0 | 226.5 | 2.59997e-41 | 1.3e-37 | 129.1 |
| pfu_aug2.0_906.1_21256.t1 | 2 | 1 | Fascin | 115 | 188 | 1.3e-13 | 51.0 | 1.9e-12 | 9.3e-09 | 35.3 |
| pfu_aug2.0_906.1_21256.t1 | 2 | 2 | FRG1 | 190 | 296 | 0.0 | 226.5 | 2.5e-31 | 1.2e-27 | 96.5 |
| pfu_aug2.0_906.1_21256.t1 | 2 | 2 | Fascin | 190 | 224 | 1.3e-13 | 51.0 | 1.2e-05 | 0.06 | 13.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_906.1_21256.t1 | gi|676459444|ref|XP_009055302.1| | hypothetical protein LOTGIDRAFT_104723 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_906.1_21256.t1 | gi|524868775|ref|XP_005091187.1| | PREDICTED: protein FRG1-like isoform X2 [Aplysia californica] | 0.0 |
| pfu_aug2.0_906.1_21256.t1 | gi|524868773|ref|XP_005091186.1| | PREDICTED: protein FRG1-like isoform X1 [Aplysia californica] | 0.0 |
| pfu_aug2.0_906.1_21256.t1 | gi|755977726|ref|XP_011308352.1| | PREDICTED: protein FRG1 homolog [Fopius arisanus] | 0.0 |
| pfu_aug2.0_906.1_21256.t1 | gi|350399503|ref|XP_003485549.1| | PREDICTED: protein FRG1 homolog [Bombus impatiens] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_906.1_21256.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_906.1_21256.t1 atgaagcaacgcataataatccgtgcgctacctatcataagtaatggacatcatagcacaatcgggcataagaaacataa gaagaggaagcgtgagcacagtgaagagagaggccctggtacatcaaacactggtcctactaaagatcagaaagacacac tacaacatggaggctggtggttagccagtgaatttgaagaaattacgggaaatgtggctatagaaattggtgaacagaga tatgttatggcattggacaatggaaaattcacattaggacctccgcgtaatgaaggagatggacctgagccagaagaaat ccttacagcagtaaaagtcaatgatacaaaaatagctctgaagtcaggatatggtaaatacctatcagtagaaccaggag ggacagtgagtgggaaggcagaggccatcagtgtaagagaacagtgggaacctgttatacaagagggtaaaatggcatta aatggcagcaatggtaaattcatggcacctaatgatgaggatgacatagtttgtgaatcatctacagcgggggattcaga aatgttaaagggtaaaatggcattaaatggcagcaatggtaaattcatggcaccgaatgatgaggatgacatagtttgtg aatcatctactgcgggggattcagaaatgttaaagatcagattaaatttgactctagaggtggatccaatggagaatata ccaaaagaagagagaggaaaaattaaagaaacagaaatcaattatgtgaagaagtttcagagtttccaagacagaaggtt acgggtaaatgaaggagacgtatctcagatcaaaaaggcaaagaaagatggaacattacatgaatgtttgttagacagcc atcatgagttcaaattacattcagaaaaaaaaacctacggtcagaacttcaagaaaaaagaacaatattatagtggattt tcttctgattcacccaaaggatgtggaagctag |
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Protein
| Protein ID | pfu_aug2.0_906.1_21256.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_906.1_21256.t1 MKQRIIIRALPIISNGHHSTIGHKKHKKRKREHSEERGPGTSNTGPTKDQKDTLQHGGWWLASEFEEITGNVAIEIGEQR YVMALDNGKFTLGPPRNEGDGPEPEEILTAVKVNDTKIALKSGYGKYLSVEPGGTVSGKAEAISVREQWEPVIQEGKMAL NGSNGKFMAPNDEDDIVCESSTAGDSEMLKGKMALNGSNGKFMAPNDEDDIVCESSTAGDSEMLKIRLNLTLEVDPMENI PKEERGKIKETEINYVKKFQSFQDRRLRVNEGDVSQIKKAKKDGTLHECLLDSHHEFKLHSEKKTYGQNFKKKEQYYSGF SSDSPKGCGS |
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