Gene
| Gene Model ID | pfu_aug2.0_87.1_23416 |
|---|---|
| Locus | scaffold87.1 : 265037 ... 304768 : + |
| To GenomeBrowser | scaffold87.1:265037..304768 |
| Genes list of scaffold | scaffold87.1 |
| Synonym | pfu_aug1.0_9363.1_46025 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_87.1_23416.t1 | 2 | 1 | EF-hand_4 | 5 | 76 | 2.3e-18 | 65.8 | 3.5e-06 | 0.0048 | 16.6 |
| pfu_aug2.0_87.1_23416.t1 | 2 | 1 | EF-hand_1 | 16 | 30 | 5.7e-07 | 28.3 | 0.0019 | 2.5 | 7.6 |
| pfu_aug2.0_87.1_23416.t1 | 2 | 2 | EF-hand_4 | 383 | 447 | 2.3e-18 | 65.8 | 1.9e-15 | 2.6e-12 | 46.3 |
| pfu_aug2.0_87.1_23416.t1 | 2 | 2 | EF-hand_1 | 399 | 425 | 5.7e-07 | 28.3 | 7.9e-07 | 0.0011 | 18.1 |
| pfu_aug2.0_87.1_23416.t1 | 1 | 1 | V-set | 707 | 778 | 6.4e-07 | 29.2 | 1.4e-09 | 1.9e-06 | 27.7 |
| pfu_aug2.0_87.1_23416.t1 | 1 | 1 | I-set | 708 | 787 | 2.7e-10 | 39.9 | 4.0e-13 | 5.4e-10 | 38.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_87.1_23416.t1 | gi|524882646|ref|XP_005097964.1| | PREDICTED: ralBP1-associated Eps domain-containing protein 1-like isoform X3 [Aplysia californica] | 0.0 |
| pfu_aug2.0_87.1_23416.t1 | gi|524882642|ref|XP_005097962.1| | PREDICTED: ralBP1-associated Eps domain-containing protein 1-like isoform X1 [Aplysia californica] | 0.0 |
| pfu_aug2.0_87.1_23416.t1 | gi|524882644|ref|XP_005097963.1| | PREDICTED: ralBP1-associated Eps domain-containing protein 1-like isoform X2 [Aplysia californica] | 0.0 |
| pfu_aug2.0_87.1_23416.t1 | gi|676474666|ref|XP_009060218.1| | hypothetical protein LOTGIDRAFT_229081 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_87.1_23416.t1 | gi|260781510|ref|XP_002585851.1| | hypothetical protein BRAFLDRAFT_73388 [Branchiostoma floridae] | 6.0e-30 |
Transcript
| Transcript ID | pfu_aug2.0_87.1_23416.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_87.1_23416.t1 atggaagcattaaagctcacaacacaagagcaaatttgctacggtgaacttttccaaagttgtgattctgatgggagtgg taaagtttctggcttgagggcgtccgaattatttctgacctcaggtcttagtcaagacgttttattgcagatatctgagc tgtgtggtgccaagagactgggacattttggaagaagtcagttttatattgctctgaagctgatagcagctgtacaatgt ggactcccaccaaagttagaaagtatcaatgcagtgcaagtcagggttatgctcaaggtcagtgatatggtcaaggaaga caactctagccatggtgcgatgagatataacccagaatggacatacctctgccgaagttcacgaaaccaagaccaagata agattgggcaacagaactcagttcctgtcaaagatctcatagaaagacaaggacagccagtacctgtatatcctccccag cagcccttggcaacctctcaacaccagccacgcggtcaactcccaccccctcctgctaccaagaaatctcacggacggtc atcctctggtcagttcagagggctagtggacagagatgggtcagctgctgctgcagcacaaccgaatctggccgtcgttc aacctcagtcacataacgcccaacagaatgttgtacaagaagacacagtaagcaatgcaaaatccccacagcagttctca ccaactgcccagtcccctccctcatctccacccaccatgataccctcaacaaacactgtccaatcaggatctaccattcc agcagtagcagccaatcagattcaggctgctgcagggacagccccagcaattaagcctgtagccaatcaggtaccaggag gcgtggcttcttcagccagccagggaccaggtagtcatatagtgaaccagaacgcttttcaagctggaatgcagaatgct atgaccggtggagctcaagggactgtcattccagagaggggacataactctgttgtgataacaagtggccatgtaccgtc aatgactagcagtgcacattcccattcacatcccggaaatcattacgattcattaaattctactcacgaagctggttggg cgtcttttgaagatgatgagagtcacggtgcagtagcaaaggagttctttgaaaaatccaagctacctgtgcaagaatta tctaaaatatggcaattatcagatctgaatcgagatggggcattatcattggaggaattctgtatagctatgcatctggt tgtattacgaaggaacgaaatagaacttcccgagagattgccgttcgctctcatgccgtatacagcttttgcaaacgagg aaccttttgctgcagacctcccccagggaagcaccttaaagcgagtgaccccgcccgcctcctccccccaggccgctgca ggacagtgggtaccggaacctcccatacaggagcagtcctcggacacagctagtgatgtcgcctcccctgtcataaaacc tgtcaactttggcttccagaaaccagatcctgtaagatcatttattgattactgcattgatgaggaaccttttgctgcag acctcccccagggtagcaccttaaagcgagtgaccccgcccgcctcctccccccaggccgctgcaggacagtgggtaccg gaacctcccatacaggagcagtcctcggacacggctagtgatgtggcctcccctgtcataaaacccgtcaattttggctt ccagaaaccagatcctgaatctggtattgcacatccaatagcagtacgagtgtcgccagagagtcatgtacacaagcaga aggatgggcatgagcgtggtagggcgttctcagaacctgctccgcatgtcgtttctccttctgatcccccagtagaacat atgaaacaacgtacagaatccgtcccagactctaacatacaaaatgacgcagactcgttattggtcgaaccaaaacgttt gatccaaaatcagagtcctgttcaaccatctatgcttcagggccggcctcggcctgtcgctgccaagaaaaatgcagctg taccaatagtgaatatcacagatgatcagtactcacaagttataggaagcaatgccgtcattccttgcgcactatcaggt gatgatgccacatcagcctactggacctttacagacagcaatggagaacagaacttaacatctggtggtagatactctgt agctgctttacccaaccctgatctcaacatttctacaattaacacaacagatactggaacatacaaatgtaaagcctcta atgctgctggagagtcatcagatacagctaatcttacagttacagggggtctatctacacctccagctgttcctcccagg gcatcacctaaagatagtcctgcgttacggaaggccgatggtacacaaagtgcaataaactcggagaagggtgacaaatt taagaaatttgagacgatacagtcgcaggaacagctggacctgatttctatgtctgatgaatccacggagaaatcaacgc ggaggtctctgtcattggattataacaaagtgggacagcctcagcagaatatgacgggtgtagaggcagccggtgataca caacttattggtgcaaaggaaagttcacaaggtgtcacatttgatattcctgaggaggaggagatgggaggaggtgaaaa aggcaaattacagtcacagatgatgaggcaagctagtcgagacaaaaaggacctacaaatggccatacgaactcacaaag agagaaactctatgttagaaagactcagtagtgaattaaatcaagaactacaagaagtgaacacttacatgaaatggtac atgtga |
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Protein
| Protein ID | pfu_aug2.0_87.1_23416.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_87.1_23416.t1 MEALKLTTQEQICYGELFQSCDSDGSGKVSGLRASELFLTSGLSQDVLLQISELCGAKRLGHFGRSQFYIALKLIAAVQC GLPPKLESINAVQVRVMLKVSDMVKEDNSSHGAMRYNPEWTYLCRSSRNQDQDKIGQQNSVPVKDLIERQGQPVPVYPPQ QPLATSQHQPRGQLPPPPATKKSHGRSSSGQFRGLVDRDGSAAAAAQPNLAVVQPQSHNAQQNVVQEDTVSNAKSPQQFS PTAQSPPSSPPTMIPSTNTVQSGSTIPAVAANQIQAAAGTAPAIKPVANQVPGGVASSASQGPGSHIVNQNAFQAGMQNA MTGGAQGTVIPERGHNSVVITSGHVPSMTSSAHSHSHPGNHYDSLNSTHEAGWASFEDDESHGAVAKEFFEKSKLPVQEL SKIWQLSDLNRDGALSLEEFCIAMHLVVLRRNEIELPERLPFALMPYTAFANEEPFAADLPQGSTLKRVTPPASSPQAAA GQWVPEPPIQEQSSDTASDVASPVIKPVNFGFQKPDPVRSFIDYCIDEEPFAADLPQGSTLKRVTPPASSPQAAAGQWVP EPPIQEQSSDTASDVASPVIKPVNFGFQKPDPESGIAHPIAVRVSPESHVHKQKDGHERGRAFSEPAPHVVSPSDPPVEH MKQRTESVPDSNIQNDADSLLVEPKRLIQNQSPVQPSMLQGRPRPVAAKKNAAVPIVNITDDQYSQVIGSNAVIPCALSG DDATSAYWTFTDSNGEQNLTSGGRYSVAALPNPDLNISTINTTDTGTYKCKASNAAGESSDTANLTVTGGLSTPPAVPPR ASPKDSPALRKADGTQSAINSEKGDKFKKFETIQSQEQLDLISMSDESTEKSTRRSLSLDYNKVGQPQQNMTGVEAAGDT QLIGAKESSQGVTFDIPEEEEMGGGEKGKLQSQMMRQASRDKKDLQMAIRTHKERNSMLERLSSELNQELQEVNTYMKWY M |
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