Gene
| Gene Model ID | pfu_aug2.0_87.1_23413 |
|---|---|
| Locus | scaffold87.1 : 213806 ... 227766 : - |
| To GenomeBrowser | scaffold87.1:213806..227766 |
| Genes list of scaffold | scaffold87.1 |
| Synonym | pfu_aug1.0_1941.1_44195 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| acetyl- mitochondrial | GO:0008152 GO:0016747 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_87.1_23413.t2 | 1 | 1 | Thiolase_N | 29 | 286 | 0.0 | 332.3 | 0.0 | 0.0 | 331.8 |
| pfu_aug2.0_87.1_23413.t2 | 2 | 1 | ketoacyl-synt | 56 | 87 | 4.7e-07 | 29.5 | 0.095 | 470.0 | 0.0 |
| pfu_aug2.0_87.1_23413.t2 | 3 | 1 | Thiolase_C | 59 | 78 | 0.0 | 229.2 | 0.0014 | 6.8 | 6.1 |
| pfu_aug2.0_87.1_23413.t2 | 2 | 2 | ketoacyl-synt | 103 | 147 | 4.7e-07 | 29.5 | 7.3e-10 | 3.6e-06 | 26.6 |
| pfu_aug2.0_87.1_23413.t2 | 3 | 2 | Thiolase_C | 295 | 377 | 0.0 | 229.2 | 1.4e-34 | 6.8e-31 | 106.2 |
| pfu_aug2.0_87.1_23413.t2 | 3 | 3 | Thiolase_C | 386 | 477 | 0.0 | 229.2 | 2.7e-38 | 1.3e-34 | 118.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_87.1_23413.t2 | gi|719739058|ref|XP_010226809.1| | PREDICTED: acetyl-CoA acetyltransferase, mitochondrial [Tinamus guttatus] | 0.0 |
| pfu_aug2.0_87.1_23413.t2 | gi|291228777|ref|XP_002734348.1| | PREDICTED: acetyl-CoA acetyltransferase, mitochondrial-like [Saccoglossus kowalevskii] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_87.1_23413.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_87.1_23413.t1 atgatcatgtttggacatctatatcgatatacagggaaatcagctgttcctctgtgcaggtgtttcagtaaaatcagtgg attaaatgatgtagtgatagccagtgctgttcgaacacctattggatctttccaaagtactctcaaggatttgccggcgc caaaacttggatctgttgcaattaaagatgctatcaatagagcaggaatcacagtggaggatgttgatgaggtatacatg gggaatgtatgtacagccatggaaaaacaagcaccttgtagacaggctgctctcggagctggtctgccgatcaaaacacc cacaacgacagtgaacaaagtatgtgcttccggtatgaaatctataatgatggctgctcaaagtctcatgtgtggacatc aggatgtgatggtagctggtgggatggaaagtatgtctaatgtgccatattacttagaaaggggagccaccccatatggt aaagtagaattaaaggacggtattgtgtttgatggtttgactgatgcctatgataatatacacatgggaaactgtgcaga aaacacagccaagaaatattccataggaagagaggagcaggaccagtatgccatacgtagttataaactcagtcagaagg cagccgcagacggagtgtttcagaaagaaatcacgcctgtctctgtaccaaaaaagaaaggagatcctgtagtagtaact gaagatgaggagtacaaaaaggttaactttgacaagtttccatcattgagggctgttttccagaaggacggtacagtaac tgcagccaatgccagtacattaaacgacggtgcagcagcgttggtattgatgactgctcagacagcacagagattaaatg tcaaaccattagcacggatcctaggattcgccgatgctgctgtaccacccattgattttcctattgcaccagcttttgca attcctaaggtgttggagatgacgggtattagcaaaaacgatgttgacatgtgggaaattaacgaggccttcagtgtagt ggtactcgccaacattaaggagctggacatcgatccgaacaaagtcaacgtccatggtggagcggtcagcattggtcatc ctataggaatgtccggagccagaattacaggtcacatggttcacaatctaaaatcgggtcaaaagggattggctggaatc tgtaatggaggaggtggagcctcagccattctgatagagaagttgtga |
|
| Transcript ID | pfu_aug2.0_87.1_23413.t2 |
| Definition | - |
>pfu_aug2.0_87.1_23413.t2 atgatcatgtttggacatctatatcgatatacagggaaatcagctgttcctctgtgcaggtgtttcagtaaaatcagtgg attaaatgatgtagtgatagccagtgctgttcgaacacctattggatctttccaaagtactctcaaggatttgccggcgc caaaacttggatctgttgcaattaaagatgctatcaatagagcaggaatcacagtggaggatgttgatgaggtatacatg gggaatgtatgtacagccatggaaaaacaagcaccttgtagacaggctgctctcggagctggtctgccgatcaaaacacc cacaacgacagtgaacaaagtatgtgcttccggtatgaaatctataatgatggctgctcaaagtctcatgtgtggacatc aggatgtgatggtagctggtgggatggaaagtatgtctaatgtgccatattacttagaaaggggagccaccccatatggt aaagtagaattaaaggacggtattgtgtttgatggtttgactgatgcctatgataatatacacatgggaaactgtgcaga aaacacagccaagaaatattccataggaagagaggagcaggaccagtatgccatacgtagttataaactcagtcagaagg cagccgcagacggagtgtttcagaaagaaatcacgcctgtctctgtaccaaaaaagaaaggagatcctgtagtagtaact gaagatgaggagtacaaaaaggttaactttgacaagtttccatcattgagggctgttttccagaaggacggtacagtaac tgcagccaatgccagtacattaaacgacggtgcagcagcgttggtattgatgactgctcagacagcacagagattaaatg tcaaaccattagcacggatcctaggattcgccgatgctgctgtaccacccattgattttcctattgcaccagcttttgca attcctaaggtgttggagatgacgggtattagcaaaaacgatgttgacatgtgggaaattaacgaggccttcagtgtagt ggtactcgccaacattaaggagctggacatcgatccgaacaaagtcaacgtccatggtggagcggtcagcattggtcatc ctataggttcaggtttgatttgtacactcaacgtgaaggtgttggagatgacgggtattaacaaaaatggtgttgacatg tgggaaattaatgaggcattcagtgtagtggtactcgccaacattaaggagctggacatcgacccaaacaaagtcaatgt ccatggtggagcggtcagcattggtcatcctataggaatgtccggagccagaattacaggtcacatggttcacaatctaa aatcgggtcaaaagggattggctggaatctgtaatggaggaggtggagcctcagccattctgatagagaagttgtga |
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Protein
| Protein ID | pfu_aug2.0_87.1_23413.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_87.1_23413.t1 MIMFGHLYRYTGKSAVPLCRCFSKISGLNDVVIASAVRTPIGSFQSTLKDLPAPKLGSVAIKDAINRAGITVEDVDEVYM GNVCTAMEKQAPCRQAALGAGLPIKTPTTTVNKVCASGMKSIMMAAQSLMCGHQDVMVAGGMESMSNVPYYLERGATPYG KVELKDGIVFDGLTDAYDNIHMGNCAENTAKKYSIGREEQDQYAIRSYKLSQKAAADGVFQKEITPVSVPKKKGDPVVVT EDEEYKKVNFDKFPSLRAVFQKDGTVTAANASTLNDGAAALVLMTAQTAQRLNVKPLARILGFADAAVPPIDFPIAPAFA IPKVLEMTGISKNDVDMWEINEAFSVVVLANIKELDIDPNKVNVHGGAVSIGHPIGMSGARITGHMVHNLKSGQKGLAGI CNGGGGASAILIEKL |
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| Protein ID | pfu_aug2.0_87.1_23413.t2 |
| Definition | - |
>pfu_aug2.0_87.1_23413.t2 MIMFGHLYRYTGKSAVPLCRCFSKISGLNDVVIASAVRTPIGSFQSTLKDLPAPKLGSVAIKDAINRAGITVEDVDEVYM GNVCTAMEKQAPCRQAALGAGLPIKTPTTTVNKVCASGMKSIMMAAQSLMCGHQDVMVAGGMESMSNVPYYLERGATPYG KVELKDGIVFDGLTDAYDNIHMGNCAENTAKKYSIGREEQDQYAIRSYKLSQKAAADGVFQKEITPVSVPKKKGDPVVVT EDEEYKKVNFDKFPSLRAVFQKDGTVTAANASTLNDGAAALVLMTAQTAQRLNVKPLARILGFADAAVPPIDFPIAPAFA IPKVLEMTGISKNDVDMWEINEAFSVVVLANIKELDIDPNKVNVHGGAVSIGHPIGSGLICTLNVKVLEMTGINKNGVDM WEINEAFSVVVLANIKELDIDPNKVNVHGGAVSIGHPIGMSGARITGHMVHNLKSGQKGLAGICNGGGGASAILIEKL |
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