Genome browser

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug2.0_87.1_23411
Locus scaffold87.1 : 179057 ... 205119 : +
To GenomeBrowser scaffold87.1:179057..205119
Genes list of scaffold scaffold87.1
Synonym NA

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug2.0_87.1_23411.t1 6 1 Ank_2 22 113 0.0 259.6 1.1e-22 3.3e-19 69.0
pfu_aug2.0_87.1_23411.t1 10 1 Ank_5 22 40 0.0 173.8 0.014 42.0 4.5
pfu_aug2.0_87.1_23411.t1 8 1 Ank_4 22 70 0.0 171.1 2.4e-13 7.0e-10 39.1
pfu_aug2.0_87.1_23411.t1 10 1 Ank_3 22 42 1.4013e-45 148.3 0.0061 18.0 5.9
pfu_aug2.0_87.1_23411.t1 10 1 Ank 23 41 0.0 203.9 0.00024 0.7 9.8
pfu_aug2.0_87.1_23411.t1 10 2 Ank_5 45 86 0.0 173.8 4.2e-12 1.2e-08 34.8
pfu_aug2.0_87.1_23411.t1 10 2 Ank 50 80 0.0 203.9 3.7e-14 1.1e-10 40.7
pfu_aug2.0_87.1_23411.t1 10 2 Ank_3 50 77 1.4013e-45 148.3 1.5e-09 4.5e-06 26.3
pfu_aug2.0_87.1_23411.t1 8 2 Ank_4 61 103 0.0 171.1 9.2e-11 2.7e-07 30.9
pfu_aug2.0_87.1_23411.t1 10 3 Ank_5 79 120 0.0 173.8 6.5e-10 1.9e-06 27.8
pfu_aug2.0_87.1_23411.t1 10 3 Ank 83 113 0.0 203.9 1.7e-08 5.0e-05 22.8
pfu_aug2.0_87.1_23411.t1 10 3 Ank_3 83 110 1.4013e-45 148.3 7.2e-08 0.00021 21.1
pfu_aug2.0_87.1_23411.t1 6 2 Ank_2 87 170 0.0 259.6 9.4e-21 2.8e-17 62.8
pfu_aug2.0_87.1_23411.t1 10 4 Ank_5 109 154 0.0 173.8 5.8e-11 1.7e-07 31.2
pfu_aug2.0_87.1_23411.t1 10 4 Ank 116 146 0.0 203.9 1.7e-08 5.0e-05 22.8
pfu_aug2.0_87.1_23411.t1 10 4 Ank_3 116 143 1.4013e-45 148.3 7.2e-08 0.00021 21.1
pfu_aug2.0_87.1_23411.t1 8 3 Ank_4 117 169 0.0 171.1 3.0e-13 9.0e-10 38.8
pfu_aug2.0_87.1_23411.t1 10 5 Ank_5 141 170 0.0 173.8 0.00017 0.51 10.6
pfu_aug2.0_87.1_23411.t1 10 5 Ank 148 170 0.0 203.9 0.00098 2.9 7.8
pfu_aug2.0_87.1_23411.t1 10 5 Ank_3 148 172 1.4013e-45 148.3 0.0026 7.7 7.0
pfu_aug2.0_87.1_23411.t1 10 6 Ank 180 212 0.0 203.9 1.9e-05 0.055 13.3
pfu_aug2.0_87.1_23411.t1 10 6 Ank_5 180 220 0.0 173.8 2.9e-08 8.7e-05 22.6
pfu_aug2.0_87.1_23411.t1 10 6 Ank_3 180 207 1.4013e-45 148.3 0.00059 1.8 9.0
pfu_aug2.0_87.1_23411.t1 6 3 Ank_2 181 244 0.0 259.6 2.4e-12 7.2e-09 35.8
pfu_aug2.0_87.1_23411.t1 8 4 Ank_4 182 234 0.0 171.1 4.1e-08 0.00012 22.4
pfu_aug2.0_87.1_23411.t1 10 7 Ank_5 206 253 0.0 173.8 8.9e-11 2.6e-07 30.6
pfu_aug2.0_87.1_23411.t1 10 7 Ank 214 245 0.0 203.9 1.6e-08 4.7e-05 22.9
pfu_aug2.0_87.1_23411.t1 10 7 Ank_3 214 240 1.4013e-45 148.3 0.00015 0.46 10.8
pfu_aug2.0_87.1_23411.t1 6 4 Ank_2 219 309 0.0 259.6 2.2e-17 6.4e-14 52.0
pfu_aug2.0_87.1_23411.t1 8 5 Ank_4 226 267 0.0 171.1 2.3e-06 0.0069 16.8
pfu_aug2.0_87.1_23411.t1 10 8 Ank_5 233 287 0.0 173.8 3.0e-12 9.0e-09 35.3
pfu_aug2.0_87.1_23411.t1 10 8 Ank 247 278 0.0 203.9 1.6e-08 4.7e-05 22.9
pfu_aug2.0_87.1_23411.t1 10 8 Ank_3 247 273 1.4013e-45 148.3 0.00015 0.46 10.8
pfu_aug2.0_87.1_23411.t1 6 5 Ank_2 251 343 0.0 259.6 4.5e-22 1.3e-18 67.0
pfu_aug2.0_87.1_23411.t1 8 6 Ank_4 259 300 0.0 171.1 1.1e-07 0.00032 21.1
pfu_aug2.0_87.1_23411.t1 10 9 Ank_5 266 320 0.0 173.8 1.5e-13 4.6e-10 39.4
pfu_aug2.0_87.1_23411.t1 10 9 Ank 279 311 0.0 203.9 1.2e-10 3.5e-07 29.6
pfu_aug2.0_87.1_23411.t1 10 9 Ank_3 279 304 1.4013e-45 148.3 3.6e-07 0.0011 19.0
pfu_aug2.0_87.1_23411.t1 8 7 Ank_4 281 333 0.0 171.1 2.3e-12 6.8e-09 36.0
pfu_aug2.0_87.1_23411.t1 10 10 Ank_5 307 353 0.0 173.8 1.2e-08 3.5e-05 23.8
pfu_aug2.0_87.1_23411.t1 6 6 Ank_2 309 366 0.0 259.6 8.1e-11 2.4e-07 30.9
pfu_aug2.0_87.1_23411.t1 10 10 Ank 312 344 0.0 203.9 1.7e-08 5.0e-05 22.8
pfu_aug2.0_87.1_23411.t1 10 10 Ank_3 312 340 1.4013e-45 148.3 3.4e-07 0.001 19.1
pfu_aug2.0_87.1_23411.t1 8 8 Ank_4 315 353 0.0 171.1 9.4e-08 0.00028 21.3

Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug2.0_87.1_23411.t1 gi|665803959|ref|XP_008550098.1| PREDICTED: ankyrin repeat domain-containing protein 6 [Microplitis demolitor] 0.0
pfu_aug2.0_87.1_23411.t1 gi|571565965|ref|XP_006567043.1| PREDICTED: ankyrin repeat domain-containing protein 6-like isoform X5 [Apis mellifera] 0.0
pfu_aug2.0_87.1_23411.t1 gi|571565954|ref|XP_006567040.1| PREDICTED: ankyrin repeat domain-containing protein 6-like isoform X2 [Apis mellifera] 0.0
pfu_aug2.0_87.1_23411.t1 gi|571565958|ref|XP_006567041.1| PREDICTED: ankyrin repeat domain-containing protein 6-like isoform X3 [Apis mellifera] 0.0
pfu_aug2.0_87.1_23411.t1 gi|571565962|ref|XP_006567042.1| PREDICTED: ankyrin repeat domain-containing protein 6-like isoform X4 [Apis mellifera] 0.0

Transcript
Transcript IDpfu_aug2.0_87.1_23411.t1
Definition-
>pfu_aug2.0_87.1_23411.t1
atgtcggtttcacccggaccgtcagcttcggttgccatgccaactgttgccataacagacagactacaagcagcagcagc
ccaaggtcaactggacgttgtcaaggaccttgtacaatcgggcatccctactcacccagatagggagggacgatcagcgt
tacattttgccgccctgaatggtcacgtgaacgtttgcgagtatctattggatcaaggctgtaatctggacgcccaagac
tcggttggatactcccctcttcatcgggcggcgtctcagggacatgtacaagcactggaactgttcctgaagaaaggatg
cgccgtggacactcaagacgaggttggatactcccctcttcatcgggcggcgtctcagggacatgtacaagcactggaac
tgttcctgaagaaaggatgcgccgtggacactcaagacgagaatggcaatgcagctgtccacgaggcggcgtggaatggt
tacagccagactttagaccttctcatcaagtttcatatctttttacttctatttcagaatggcaatgcagctgtccacga
ggcagcgtggaatggttacagccagactttagaccttctcatcaagtttaactgcaacattcagttaaccaataaggctg
gatttactgcactccatctatctgcacaaaatggccataaccaaagtactcgtgtactcctgctggcaggatgcaatgca
gacgtcaaaaacaacgctggatttactgcactccatctatctgcacaaaatggccataaccaaagtactcgtgtactcct
gctggcaggatgcaatgcagacgtcaaaaataactatggtgacacggcccttcacacggcggctaggtatggtcatgcag
gcgtgacaaggatcctcatcagtgctcgctgctgtctcaacgaacaaaataagaatggtgacacggcgttacacatagct
gcagcactgaagagaaggaagatagccaagcttctggtggacgctagcattgatgtctatgttaggaataagcaaaatga
aacagcgatggaggttgccagaagaaaagaacaccaggaaattattgtgatcatttcgtcttttgccagggattttggta
ataataatgaagatgttgtttatgacaaataa

Protein
Protein IDpfu_aug2.0_87.1_23411.t1
Definition-
>pfu_aug2.0_87.1_23411.t1
MSVSPGPSASVAMPTVAITDRLQAAAAQGQLDVVKDLVQSGIPTHPDREGRSALHFAALNGHVNVCEYLLDQGCNLDAQD
SVGYSPLHRAASQGHVQALELFLKKGCAVDTQDEVGYSPLHRAASQGHVQALELFLKKGCAVDTQDENGNAAVHEAAWNG
YSQTLDLLIKFHIFLLLFQNGNAAVHEAAWNGYSQTLDLLIKFNCNIQLTNKAGFTALHLSAQNGHNQSTRVLLLAGCNA
DVKNNAGFTALHLSAQNGHNQSTRVLLLAGCNADVKNNYGDTALHTAARYGHAGVTRILISARCCLNEQNKNGDTALHIA
AALKRRKIAKLLVDASIDVYVRNKQNETAMEVARRKEHQEIIVIISSFARDFGNNNEDVVYDK

  • MGU Home
  • Genome Projects
  • Information
  • Genome Browser
  • Blast Search
  • Keyword Search
  • Downloads

Gene ID:



Keyword:



  • Login

copyright © Marine Genomics Unit 2015
Okinawa Institute of Science and Technology
1919-1 Tancha, Onna-son, Kunigami-gun, Okinawa, Japan 904-0495