Gene
| Gene Model ID | pfu_aug2.0_87.1_23409 |
|---|---|
| Locus | scaffold87.1 : 51496 ... 56777 : + |
| To GenomeBrowser | scaffold87.1:51496..56777 |
| Genes list of scaffold | scaffold87.1 |
| Synonym | pfu_aug1.0_1906.1_08170 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| frizzled class receptor 10 precursor | GO:0004888 GO:0005488 GO:0016020 GO:0016055 GO:0044767 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_87.1_23409.t1 | 2 | 1 | Fz | 9 | 127 | 2.3e-31 | 108.5 | 3.6e-35 | 2.7e-31 | 108.3 |
| pfu_aug2.0_87.1_23409.t1 | 1 | 1 | Frizzled | 215 | 537 | 0.0 | 440.5 | 0.0 | 0.0 | 440.1 |
| pfu_aug2.0_87.1_23409.t1 | 2 | 2 | Fz | 266 | 292 | 2.3e-31 | 108.5 | 1.8 | 13000.0 | -3.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_87.1_23409.t1 | gi|676474075|ref|XP_009060024.1| | hypothetical protein LOTGIDRAFT_228923 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_87.1_23409.t1 | gi|524888155|ref|XP_005100653.1| | PREDICTED: frizzled-10-like [Aplysia californica] | 0.0 |
| pfu_aug2.0_87.1_23409.t1 | gi|47939935|gb|AAH72128.1| | Fzd10b protein [Xenopus laevis] | 0.0 |
| pfu_aug2.0_87.1_23409.t1 | gi|148237992|ref|NP_001080926.1| | frizzled class receptor 10 precursor [Xenopus laevis] | 0.0 |
| pfu_aug2.0_87.1_23409.t1 | gi|148225292|ref|NP_001080925.1| | frizzled-10-A precursor [Xenopus laevis] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_87.1_23409.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_87.1_23409.t1 atggacagacatcagtatcagagatgtgagaggataaccattcctatgtgcttggacatgagatacaatttaactcgtat gccgaatttaattggacatactaatcaaaaggatgctgcaatatcagttcatgaattcacacctttggtgcagttcggat gttcaagacttttgagattttttctgtgttcccaattcgcacctatgtgcacagaaatgggagatgaaactctagtgata cctgtttgcagatctatgtgtttggaagttaaaagtaaatgtgcgcctgtgctgagtagattcaatttcaaatggccacc tatgcttgattgttcgaaactaccacagaagaacgatcctaaaccaaacaatctatgtatggaagctccaaatatgacag acgatcctaaaatggacaatagcgacatattcggaagggaacaagatacctcagaatggctgagaatcttagaagagctt cacaagaaagaccatgtcaacaaagagaaaaataagtataagattgagaataaaaacaagcaatctggtgacagccaaga tgctatatgtacagatcgatttgtacatgtggacaccgtcgacaaaaataatacatgcgccgcaaggtgtaacatcgatg ttttattcagccgagaaaataaatctttcgccgagatttggtctataatttgggcctcgctatgctgtgtatcaacagtg atgactttccttacatttatcatagataccaacagatttaagtatccggaacgtcccatcatatttttggcgatgtgcta tgcaatttattccatggcctatttcattcgtgcaattacgggacctaatgcaatatcctgcgatcaaacaagagacggac aggaatttatcatacaagaaggtctagagagcacatggtgcataattgtatttttaattttatacttttttggcatggct gcccaactgtggtgggtgatactcacagtgacttggttcctagccgcagggatgaaatgggggcaggaggccatcgaggc ccttagtagttattttcatttagcagcatgggcaatacctgcaattaaaacaataataattctgactctgagaagagttg acggtgatgaacttaccggcctatgttacgtgggaaatcaggacaccactgcattgacaggttttgttttagctccttta attgtgtatttgttaattggaacgacttttattatggccggattcatggccttgttcagaataagaaacaatttaaagca agacggcactaataatattcgtaaactagaaaaacttatggcaaaaatcggagttttttctgtgctgtatactgtcccgg caacatgtgtgataggttgttatttttacgaaagagtaaattatggagcctgggtatatcaagcatatttattgaactgt tcagtagtcaaaaacacaggacaaaaagattgtactttggaaaaatcaataccgcaggtagaagtttatatgttgaaaat attcatgtcactggtggtgggaacgactagcggtatgtggatttggagtagcaaaactattaactcctggaaacgtttct tttccaatagatttagcagacggaaatctaatttcagtgctagtggaagcgcgggctatcaacctgctcccgtgatcgtc ttgaaaagtcagcatggaccgaaattaacaccgaagaacagtgcttcccgcgtctga |
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Protein
| Protein ID | pfu_aug2.0_87.1_23409.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_87.1_23409.t1 MDRHQYQRCERITIPMCLDMRYNLTRMPNLIGHTNQKDAAISVHEFTPLVQFGCSRLLRFFLCSQFAPMCTEMGDETLVI PVCRSMCLEVKSKCAPVLSRFNFKWPPMLDCSKLPQKNDPKPNNLCMEAPNMTDDPKMDNSDIFGREQDTSEWLRILEEL HKKDHVNKEKNKYKIENKNKQSGDSQDAICTDRFVHVDTVDKNNTCAARCNIDVLFSRENKSFAEIWSIIWASLCCVSTV MTFLTFIIDTNRFKYPERPIIFLAMCYAIYSMAYFIRAITGPNAISCDQTRDGQEFIIQEGLESTWCIIVFLILYFFGMA AQLWWVILTVTWFLAAGMKWGQEAIEALSSYFHLAAWAIPAIKTIIILTLRRVDGDELTGLCYVGNQDTTALTGFVLAPL IVYLLIGTTFIMAGFMALFRIRNNLKQDGTNNIRKLEKLMAKIGVFSVLYTVPATCVIGCYFYERVNYGAWVYQAYLLNC SVVKNTGQKDCTLEKSIPQVEVYMLKIFMSLVVGTTSGMWIWSSKTINSWKRFFSNRFSRRKSNFSASGSAGYQPAPVIV LKSQHGPKLTPKNSASRV |
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