Gene
| Gene Model ID | pfu_aug2.0_852.1_07952 |
|---|---|
| Locus | scaffold852.1 : 149726 ... 157352 : + |
| To GenomeBrowser | scaffold852.1:149726..157352 |
| Genes list of scaffold | scaffold852.1 |
| Synonym | pfu_aug1.0_4543.1_01760 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_852.1_07952.t1 | 1 | 1 | Arf | 28 | 194 | 9.4e-06 | 24.9 | 6.8e-09 | 1.3e-05 | 24.5 |
| pfu_aug2.0_852.1_07952.t1 | 1 | 1 | Ras | 39 | 204 | 6.19934e-42 | 142.7 | 4.2039e-45 | 7.49975e-42 | 142.4 |
| pfu_aug2.0_852.1_07952.t1 | 1 | 1 | Miro | 39 | 152 | 4.9e-16 | 59.2 | 4.4e-19 | 8.2e-16 | 58.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_852.1_07952.t1 | gi|676483852|ref|XP_009063158.1| | hypothetical protein LOTGIDRAFT_129708 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_852.1_07952.t1 | gi|66509892|ref|XP_394608.2| | PREDICTED: cdc42 homolog isoformX1 [Apis mellifera] | 0.0 |
| pfu_aug2.0_852.1_07952.t1 | gi|380025174|ref|XP_003696353.1| | 0.0 | |
| pfu_aug2.0_852.1_07952.t1 | gi|512934827|ref|XP_004933126.1| | PREDICTED: cdc42 homolog [Bombyx mori] | 0.0 |
| pfu_aug2.0_852.1_07952.t1 | gi|551506475|ref|XP_005804770.1| | PREDICTED: cell division control protein 42 homolog [Xiphophorus maculatus] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_852.1_07952.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_852.1_07952.t1 atgaagatggaaattgagtctaatgagactgcggatggtgctaatgtaccccaggataaaaataaaaacgaactgaccga tgttttaaaggcacgagctggagaaggggagatcaaatgttgtatagtcggtgatggcggtgtgggcaagacgagcatgt tgctgagctacacgaccggcaaaatgttgtcaaattacgaaccaacatgctttgaaagttatgtcattgaggtgaaacag ggggaaaccacgaagaagatgtttgtaatggacacagctggtcaagaaacctacgacagattaaggacactttcatatta cgacacagacgtatttatagtgtgtttttcggttgacgatcaggactcatttgacaatgtgagaacgagatggataccag aaatcaaagaattccgaccgaacactccctttatcatggtaggtacccaaaccgatctcagacactcagttgtggacatt acagacgcttgcgtatcatcagcgagaggcaaaaaagctgcaaagaaactaggtgccaaaaaatatatcgaatgtagttc agtagacggacaaggtacggactatgtattcgaagtggcactaaagacggcgcaatctcccataggacagaagaaaatat ggaaaagcatcaagagagctttccggaaaaaagatgctgcagtttga |
|
Protein
| Protein ID | pfu_aug2.0_852.1_07952.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_852.1_07952.t1 MKMEIESNETADGANVPQDKNKNELTDVLKARAGEGEIKCCIVGDGGVGKTSMLLSYTTGKMLSNYEPTCFESYVIEVKQ GETTKKMFVMDTAGQETYDRLRTLSYYDTDVFIVCFSVDDQDSFDNVRTRWIPEIKEFRPNTPFIMVGTQTDLRHSVVDI TDACVSSARGKKAAKKLGAKKYIECSSVDGQGTDYVFEVALKTAQSPIGQKKIWKSIKRAFRKKDAAV |
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