Gene
| Gene Model ID | pfu_aug2.0_830.1_01173 |
|---|---|
| Locus | scaffold830.1 : 216423 ... 226756 : - |
| To GenomeBrowser | scaffold830.1:216423..226756 |
| Genes list of scaffold | scaffold830.1 |
| Synonym | pfu_aug1.0_9303.1_53327 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| calpain-a-like isoform x1 | GO:0004198 GO:0005622 GO:0006508 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_830.1_01173.t1 | 2 | 1 | Peptidase_C2 | 91 | 211 | 8.70206e-43 | 146.4 | 8.5e-39 | 6.3e-35 | 120.6 |
| pfu_aug2.0_830.1_01173.t1 | 2 | 2 | Peptidase_C2 | 212 | 252 | 8.70206e-43 | 146.4 | 1.6e-09 | 1.2e-05 | 24.5 |
| pfu_aug2.0_830.1_01173.t1 | 3 | 1 | Calpain_III | 270 | 334 | 1.7e-20 | 73.1 | 3.4e-07 | 0.0025 | 17.4 |
| pfu_aug2.0_830.1_01173.t1 | 3 | 2 | Calpain_III | 331 | 365 | 1.7e-20 | 73.1 | 1.3e-09 | 9.4e-06 | 25.3 |
| pfu_aug2.0_830.1_01173.t1 | 3 | 3 | Calpain_III | 390 | 427 | 1.7e-20 | 73.1 | 1.0e-10 | 7.6e-07 | 28.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_830.1_01173.t1 | gi|524865261|ref|XP_005089461.1| | PREDICTED: calpain-A-like isoform X1 [Aplysia californica] | 0.0 |
| pfu_aug2.0_830.1_01173.t1 | gi|260793634|ref|XP_002591816.1| | hypothetical protein BRAFLDRAFT_88755 [Branchiostoma floridae] | 8.40779e-45 |
| pfu_aug2.0_830.1_01173.t1 | gi|676440301|ref|XP_009049133.1| | hypothetical protein LOTGIDRAFT_141267, partial [Lottia gigantea] | 2.99878e-43 |
| pfu_aug2.0_830.1_01173.t1 | gi|584021209|ref|XP_006805281.1| | PREDICTED: calpain-5-like [Neolamprologus brichardi] | 3.0e-37 |
| pfu_aug2.0_830.1_01173.t1 | gi|568957647|ref|XP_006531468.1| | PREDICTED: calpain-9 isoform X2 [Mus musculus] | 2.0e-35 |
Transcript
| Transcript ID | pfu_aug2.0_830.1_01173.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_830.1_01173.t1 atgttcatttacctacaccaggctattgcactaatatcagcaaaagaggactcacagatagaggaatttgaaatagtagc atttgaaacgcccaagcctccagaatttggtacagattatatcaagaacgacctaggggtgcatgaaaaacatgtggatc taagggaggtcgcagaggaaccagaattcgaacaggaaccagagcctaacgatggtggcctgtacacagatagagacttt acactacaagacgctgtacccggaaaggcggggcaactagaatggaaacgcccaacagaaattagagataacccagtgct attttcggaaggaactacacgattcgatgtgggacagggatcattcggaacgtgttggttcttatcgatggtatcggtta tagcagacaaacccaaattaatggccagagtaattccaagagatgcttacaaggtgggaaccaaggactatcacggcatt ttccactgccggttttggaggtttggtatttgggacgatgtttttattgatgattatctgccaatcatttatggaagtca gtactatggagcgagatcatccaccgatgaaaacgaaacctggccgtcattgttggaaaagggttttgccaggagccctg agtggcagtccatacaaggccaagtgcaggcaccaaacaaagatgatggagaattctacatgagcttcgaacacttcctt acttattttgactccgttacgatctgttcactcacccctgactttgatcaagacggagacaaaagcgatggtctaagcta tgtggccagtatttatggacagtggaagggggaggaagctgcaggtttccaaaagaaaatccagaatcccaaatactcct tccgcgttggaaacgattgtgctgacagggagggaaaggtacctatagttgttcaaataattcagcgcacaaagaagagg aaagctaaccacccatctatacgctgtgatttatataaggtgtcaccaggggaatattgtgccgtcccgtccacgattga aggaggaatagagaaggaattcatgataagagttttcacaagtgggcctatatcagatatcaggcacatagatagcgatc tgaccattcaagagctcacagactcgcctgatccttgcttagaatgtagccagtgtttggttggacaatggattagcggt cagaatgctggtggtcaagtgtcaaggcagacattccatacaaaccctcagttccatattgatgtaccaaatcacggtga gtacgatgtcatctgttga |
|
Protein
| Protein ID | pfu_aug2.0_830.1_01173.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_830.1_01173.t1 MFIYLHQAIALISAKEDSQIEEFEIVAFETPKPPEFGTDYIKNDLGVHEKHVDLREVAEEPEFEQEPEPNDGGLYTDRDF TLQDAVPGKAGQLEWKRPTEIRDNPVLFSEGTTRFDVGQGSFGTCWFLSMVSVIADKPKLMARVIPRDAYKVGTKDYHGI FHCRFWRFGIWDDVFIDDYLPIIYGSQYYGARSSTDENETWPSLLEKGFARSPEWQSIQGQVQAPNKDDGEFYMSFEHFL TYFDSVTICSLTPDFDQDGDKSDGLSYVASIYGQWKGEEAAGFQKKIQNPKYSFRVGNDCADREGKVPIVVQIIQRTKKR KANHPSIRCDLYKVSPGEYCAVPSTIEGGIEKEFMIRVFTSGPISDIRHIDSDLTIQELTDSPDPCLECSQCLVGQWISG QNAGGQVSRQTFHTNPQFHIDVPNHGEYDVIC |
|