Gene
| Gene Model ID | pfu_aug2.0_83.1_10243 |
|---|---|
| Locus | scaffold83.1 : 241801 ... 272287 : + |
| To GenomeBrowser | scaffold83.1:241801..272287 |
| Genes list of scaffold | scaffold83.1 |
| Synonym | pfu_aug1.0_8384.1_09752 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| two pore calcium channel protein 2 | GO:0006810 GO:0044699 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_83.1_10243.t1 | 4 | 1 | Ion_trans | 105 | 136 | 1.7e-21 | 76.4 | 0.084 | 1200.0 | -1.5 |
| pfu_aug2.0_83.1_10243.t1 | 4 | 2 | Ion_trans | 195 | 362 | 1.7e-21 | 76.4 | 1.0e-17 | 1.5e-13 | 50.4 |
| pfu_aug2.0_83.1_10243.t1 | 4 | 3 | Ion_trans | 496 | 616 | 1.7e-21 | 76.4 | 1.9e-14 | 2.9e-10 | 39.7 |
| pfu_aug2.0_83.1_10243.t1 | 4 | 4 | Ion_trans | 620 | 664 | 1.7e-21 | 76.4 | 0.0045 | 66.0 | 2.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_83.1_10243.t1 | gi|676490378|ref|XP_009065249.1| | hypothetical protein LOTGIDRAFT_229618 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_83.1_10243.t1 | gi|222353676|ref|NP_001138448.1| | two-pore calcium channel 2 [Strongylocentrotus purpuratus] | 0.0 |
| pfu_aug2.0_83.1_10243.t1 | gi|269993231|emb|CBI63264.1| | two-pore channel 2 [Strongylocentrotus purpuratus] | 0.0 |
| pfu_aug2.0_83.1_10243.t1 | gi|697830003|ref|XP_009635375.1| | PREDICTED: LOW QUALITY PROTEIN: two pore calcium channel protein 2 [Egretta garzetta] | 0.0 |
| pfu_aug2.0_83.1_10243.t1 | gi|723121946|ref|XP_010284929.1| | PREDICTED: two pore calcium channel protein 2, partial [Phaethon lepturus] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_83.1_10243.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_83.1_10243.t1 atgacagaaaaagagatcccagatgggaatattgtgaaattaagcacagctgaggatcagataccagacgacgatgtaga aacaaacatcagaacagcaagaacaggtggtttggtatcaaatggtcaaagtgaaaatacaaaatgtcagtcacaagttc agggatatctaggtgttgacaacaaacatttacaacacaatgccaatggaatcatcaataacgatgtcactgactcatac tcatccaggccaattaaccgttcaaataacaaaagacaacttgatatcaaagacttccatacgttccatgtgttctgtgt gttcctgagagtgttccggatgttccttaaagtgttccaaatgttcctgaaagtgttcagggtgttcctgagagtgttcc gaatgttcctgaaagtgttcctgagagagttcagaatgttcctaaaagtgttctgggttcctgagagtgttccgaatgtt cctgaaagtgttccgggtgttcctgagagtgttctggatgttcctgaaagcgttccggattttgattcggagcataatct aggcctcctacaagcaacagtttttattgaggatgcatcaaagttttggttgatgggtcgagcagagtttatgaagaaga aatggcttattgctgccttggttgttttatctctatccctgatagactgggctatttctatgggatttcagtgtacagag acaaacagagtgaggaggatcttacgcccatttttcatcattgttcattcttctcttatgaagaagacagtcaaaagtct gcagagaacgttaccagaagttgttagtgttttgctgttactggcattacatctttatgtcttcacattagtcggaatgc ttcttttcccacaacctcagggtggacataggaaacatacaggtaacaacactgtagatcttacagcgtccaatcaaaac tcctcatctaatgccaaccagacagatgtacatacaacagggaatgcttatttcacgaccttgtccgactcctttatgag tttactggtgctgttaaccactgcaaataacccagatggtaatttctgcttcatgaatatgtttctggccgtcatctata atcagttcagaggatatttccagaactcactacaggcgagtttattacgtcgtagagtgggagtacgagctgcgtatgag gtcctaagagatcacagcacatacgctaggatagctacaactcaaatcagggaaggtgttcctaagtcagatgttatgac agtagtggagcatgctaacattcctaaatacattaaaactgctctgaaaagggatttggaccagcgacatgataattata accacctcacgttagccgagtttcaaaaatgctttgaattgatggatacggaagtgaagttccgcagtgtagagcttacg acagagtatgataggacactaaatgacggcacttcaagtctaaatattgtgaactttgctttcatcatttactacctggt agagcagatattaaagtttacagcccttggttggaagagatatgtgtatgaaaaaggaaatatctatgatggaatcataa ctattatacttgttgtgatggaaattatcagtatatcaatatatggccttcccttgagcaggcatccaagaggagatgag agcatcacattatggaatgtagtacgtctcatcaacatcctgatcatgtttaggttacttcgcattattcctagtataaa ggcaatgtctgtggttgccaatacactgattgatctggtcagaaatctcaagtcattcgctggcattttaattgcagcca ttgtagtattatgggatgtaatggttgtgaataattggagtatatttctgaaggagtatgctgtggtagcatcagagtgg tcatacttatactttgttgcctggtggttattatcggttgtgatagttctacagctttttacagctctcattattgagaa ttttatcatgaagtgggataagagtatacaccatacatcagaacccacaacacgtaggagttcagagtttgaagagtctg gtcactttatgactgtacacgatatgttccgtcactttcaagatataagagaataa |
|
Protein
| Protein ID | pfu_aug2.0_83.1_10243.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_83.1_10243.t1 MTEKEIPDGNIVKLSTAEDQIPDDDVETNIRTARTGGLVSNGQSENTKCQSQVQGYLGVDNKHLQHNANGIINNDVTDSY SSRPINRSNNKRQLDIKDFHTFHVFCVFLRVFRMFLKVFQMFLKVFRVFLRVFRMFLKVFLREFRMFLKVFWVPESVPNV PESVPGVPESVLDVPESVPDFDSEHNLGLLQATVFIEDASKFWLMGRAEFMKKKWLIAALVVLSLSLIDWAISMGFQCTE TNRVRRILRPFFIIVHSSLMKKTVKSLQRTLPEVVSVLLLLALHLYVFTLVGMLLFPQPQGGHRKHTGNNTVDLTASNQN SSSNANQTDVHTTGNAYFTTLSDSFMSLLVLLTTANNPDGNFCFMNMFLAVIYNQFRGYFQNSLQASLLRRRVGVRAAYE VLRDHSTYARIATTQIREGVPKSDVMTVVEHANIPKYIKTALKRDLDQRHDNYNHLTLAEFQKCFELMDTEVKFRSVELT TEYDRTLNDGTSSLNIVNFAFIIYYLVEQILKFTALGWKRYVYEKGNIYDGIITIILVVMEIISISIYGLPLSRHPRGDE SITLWNVVRLINILIMFRLLRIIPSIKAMSVVANTLIDLVRNLKSFAGILIAAIVVLWDVMVVNNWSIFLKEYAVVASEW SYLYFVAWWLLSVVIVLQLFTALIIENFIMKWDKSIHHTSEPTTRRSSEFEESGHFMTVHDMFRHFQDIRE |
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