Gene
| Gene Model ID | pfu_aug2.0_819.1_31190 |
|---|---|
| Locus | scaffold819.1 : 195500 ... 200749 : - |
| To GenomeBrowser | scaffold819.1:195500..200749 |
| Genes list of scaffold | scaffold819.1 |
| Synonym | pfu_aug1.0_19491.1_69271 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_819.1_31190.t1 | 1 | 1 | DUF605 | 8 | 131 | 2.8e-11 | 43.4 | 6.2e-15 | 9.2e-11 | 41.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_819.1_31190.t1 | gi|676431223|ref|XP_009046180.1| | hypothetical protein LOTGIDRAFT_137913 [Lottia gigantea] | 3.0e-19 |
| pfu_aug2.0_819.1_31190.t1 | gi|524877725|ref|XP_005095560.1| | PREDICTED: vacuolar protein sorting-associated protein VTA1 homolog [Aplysia californica] | 5.0e-19 |
| pfu_aug2.0_819.1_31190.t1 | gi|318054666|ref|NP_001187409.1| | vacuolar protein sorting-associated protein VTA1 homolog [Ictalurus punctatus] | 5.0e-15 |
| pfu_aug2.0_819.1_31190.t1 | gi|114050853|ref|NP_001040410.1| | vacuolar protein sorting-associated protein VTA1 homolog [Bombyx mori] | 4.0e-14 |
| pfu_aug2.0_819.1_31190.t1 | gi|564251913|ref|XP_006264995.1| | PREDICTED: vacuolar protein sorting-associated protein VTA1 homolog [Alligator mississippiensis] | 2.0e-13 |
Transcript
| Transcript ID | pfu_aug2.0_819.1_31190.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_819.1_31190.t1 atgttgtcaagtccttttatacagctgattgagaaaaacagaaagtatgccaaatggaaggcagcgtatatacataaatg tctgaaggctggagagacccctataccaggccccatgcaggaagaaggagatgagtttcaaggagatgatggcacaagtg gtacggctgattcggcttacccatcgtcatcaacaagtatgcctccgcctcagcctggacccagcacctctaactggcag ccctatagtgggggaaatagcctcccaccccctaacaacagtatgtacccagctgcaggggcacacgccccaccttccac accccaggatccaggtcataggtcacctcaacaacccaaacctgtaccccaacaagaagtatggcagcctccagaaaatc ccagtaagtga |
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Protein
| Protein ID | pfu_aug2.0_819.1_31190.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_819.1_31190.t1 MLSSPFIQLIEKNRKYAKWKAAYIHKCLKAGETPIPGPMQEEGDEFQGDDGTSGTADSAYPSSSTSMPPPQPGPSTSNWQ PYSGGNSLPPPNNSMYPAAGAHAPPSTPQDPGHRSPQQPKPVPQQEVWQPPENPSK |
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