Gene
| Gene Model ID | pfu_aug2.0_819.1_31188 |
|---|---|
| Locus | scaffold819.1 : 168977 ... 174415 : - |
| To GenomeBrowser | scaffold819.1:168977..174415 |
| Genes list of scaffold | scaffold819.1 |
| Synonym | pfu_aug1.0_9946.1_10034 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_819.1_31188.t1 | 4 | 1 | zf-C3HC4_3 | 101 | 116 | 4.9e-12 | 45.3 | 5.8 | 12000.0 | -4.0 |
| pfu_aug2.0_819.1_31188.t1 | 2 | 1 | BIR | 235 | 299 | 4.10006e-41 | 139.2 | 3.7e-20 | 7.9e-17 | 61.4 |
| pfu_aug2.0_819.1_31188.t1 | 4 | 2 | zf-C3HC4_3 | 269 | 278 | 4.9e-12 | 45.3 | 2.0 | 4300.0 | -2.6 |
| pfu_aug2.0_819.1_31188.t1 | 2 | 2 | BIR | 471 | 535 | 4.10006e-41 | 139.2 | 5.1e-25 | 1.1e-21 | 77.0 |
| pfu_aug2.0_819.1_31188.t1 | 4 | 3 | zf-C3HC4_3 | 505 | 508 | 4.9e-12 | 45.3 | 4.5 | 9600.0 | -3.7 |
| pfu_aug2.0_819.1_31188.t1 | 4 | 4 | zf-C3HC4_3 | 719 | 761 | 4.9e-12 | 45.3 | 2.3e-15 | 4.9e-12 | 45.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_819.1_31188.t1 | gi|511889596|ref|XP_004764520.1| | PREDICTED: baculoviral IAP repeat-containing protein 3 [Mustela putorius furo] | 2.8026e-45 |
| pfu_aug2.0_819.1_31188.t1 | gi|395506681|ref|XP_003757659.1| | 9.80909e-45 |
Transcript
| Transcript ID | pfu_aug2.0_819.1_31188.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_819.1_31188.t1 atgcacaacacaaacaaaggtacccaggtggtcatgatagatagacaagaggaagaaagaatcaataatcttattgacaa atgtacacaaagtgaacaagaaaaccccgatgtaaaagaaaaaggaacacaaatggaccaatctatctcaaaacacgaga aagatgtcagcaacaccgatctgtcaatccaaattgcagatttacgaaatgagattttgtcgattaaacagcgactgttt caacagaatcaaccttcgacccaaaagaaacaatctctgaagtggaagacgaagacaaagaaatgtaaaaggaaaatcag gaaaaatatcaaacgaagaactcgttgtcagaactcctcagaatcaagaatanacgaaacatttatggatgacctgtatc aaaaatacatactcagcaggaaagtaaaagagagaaaaatctccatgagtgaatcctgtatgttcccccaaccagtcatg ggagattttacaatgccatacaagcgaatcggcttccttgattataatattctaggaatcaagaatattccgaaacagac acagtcaaacaaaatggacgtctggccatcagaagtaaatgtcaacccaccaagaagcctagatcagtactttagaaact cttcacaacacgaagcagagtcatcggaacaagcctcaagatcaatgaacctagaaatgttgagattagaaacttttaag aattttccacagacttcaagcgcacgccctattcgtcttgcgagatccggtttctttttcactgggaatgaagacagagt tgagtgttactcatgtggtataatatatagaaactggagaaatgacgaggatccaagcgaggtacacagaagaatatctc ctatgtgtcagcatgtccaaaatcaagatcgaaacaatgtaccaatacatgccggaagtacaacatcacccgcacaaacc agtcatgctgagcaatcgacgatgccatcagaatcgaacagccacatttcgactgcaaatgctaatcctcagattagctc ttccagtggaatgtcaaatacgaatgtcaacgacttaccagtgtcatcctccgatatacaaggagaaagacaaggaaact cacagaatactgtcaatggaaattcaacgatctctacgtcaacaatgcattcaaccgtttctgcagcaatgggcgcctcc tcatctccagtgtctcattttgccctaaaccatgctcaaaatcaaaataatggtacaatcacaacgtcatcaaatcacaa tgagcagacatcaccaagaagcaatgacagtggtcagacatccacccgtgatgctatgatacaaaagttgaatcctcttg gaatcacttttgataaaccacgctatccagcttatgcaatcataacagtaagaatcagttcctttcaaaactggccccca agaaagactcagactcccagggcattggcatatgcaggatttctgtatgctggacacgctgattacgtccgctgcttctt ttgtgggggagggttgagaaactgggaggatggggatgacccctgggtggaacatgctaggtggtttccaaggtgtgcat tcctcaggcagaacaaaggagacgaatttgtgacactcgtgcaggagcaacacttaaaagagcaaaaccaaagtacagag ggaagaggcaatgtaagctgtaatgaagacaatggcatgggaggcggcgttggacgaataagaaccgcacaagaaagtgt catgaactctgacgctgtgagaagcgtcatggaaatgggatatacagaaaaacaagtnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnatctgacgtattggaaaagcggaattggaacatcaatgggaaaccaag tttgacggctcaaggcattttggatatccttctagatgaggaatcaagtgcagaatgcaatacagaggctaatgctgggg agaaatcagaatctcttactgatcctacctatgagactagatccttaatggaggagaaccttagactcaaagaccagaga ctgtgtaaggtgtgtcttgataaggaggcgaacatcgccatgctaccttgtggacatctttgctgctgtcctgaatgtgc cccagctatgaggaagtgtccaatttgtagggcatttgtcaagggcacagtcaggacatggcttgcgtaa |
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Protein
| Protein ID | pfu_aug2.0_819.1_31188.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_819.1_31188.t1 MHNTNKGTQVVMIDRQEEERINNLIDKCTQSEQENPDVKEKGTQMDQSISKHEKDVSNTDLSIQIADLRNEILSIKQRLF QQNQPSTQKKQSLKWKTKTKKCKRKIRKNIKRRTRCQNSSESRIXETFMDDLYQKYILSRKVKERKISMSESCMFPQPVM GDFTMPYKRIGFLDYNILGIKNIPKQTQSNKMDVWPSEVNVNPPRSLDQYFRNSSQHEAESSEQASRSMNLEMLRLETFK NFPQTSSARPIRLARSGFFFTGNEDRVECYSCGIIYRNWRNDEDPSEVHRRISPMCQHVQNQDRNNVPIHAGSTTSPAQT SHAEQSTMPSESNSHISTANANPQISSSSGMSNTNVNDLPVSSSDIQGERQGNSQNTVNGNSTISTSTMHSTVSAAMGAS SSPVSHFALNHAQNQNNGTITTSSNHNEQTSPRSNDSGQTSTRDAMIQKLNPLGITFDKPRYPAYAIITVRISSFQNWPP RKTQTPRALAYAGFLYAGHADYVRCFFCGGGLRNWEDGDDPWVEHARWFPRCAFLRQNKGDEFVTLVQEQHLKEQNQSTE GRGNVSCNEDNGMGGGVGRIRTAQESVMNSDAVRSVMEMGYTEKQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXSDVLEKRNWNINGKPSLTAQGILDILLDEESSAECNTEANAGEKSESLTDPTYETRSLMEENLRLKDQR LCKVCLDKEANIAMLPCGHLCCCPECAPAMRKCPICRAFVKGTVRTWLA |
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