Gene
| Gene Model ID | pfu_aug2.0_819.1_31186 |
|---|---|
| Locus | scaffold819.1 : 89756 ... 103790 : + |
| To GenomeBrowser | scaffold819.1:89756..103790 |
| Genes list of scaffold | scaffold819.1 |
| Synonym | pfu_aug1.0_4348.1_16369 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_819.1_31186.t1 | 2 | 1 | AA_permease_2 | 61 | 228 | 0.0 | 190.8 | 3.1e-26 | 5.0e-23 | 81.3 |
| pfu_aug2.0_819.1_31186.t1 | 2 | 1 | AA_permease | 69 | 230 | 8.6e-37 | 126.5 | 3.6e-18 | 6.0e-15 | 54.5 |
| pfu_aug2.0_819.1_31186.t1 | 2 | 2 | AA_permease_2 | 231 | 446 | 0.0 | 190.8 | 9.5e-37 | 1.6e-33 | 115.9 |
| pfu_aug2.0_819.1_31186.t1 | 2 | 2 | AA_permease | 231 | 447 | 8.6e-37 | 126.5 | 1.4e-25 | 2.3e-22 | 79.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_819.1_31186.t1 | gi|675626499|ref|XP_008941583.1| | PREDICTED: B(0,+)-type amino acid transporter 1 [Merops nubicus] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_819.1_31186.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_819.1_31186.t1 atggagacaacaacgtttgaagattcgttcaaggagaatcctctcaatggttccactagcaccccaatgaagaatggctc cactccaacaaggaagcgatacaactctgattttggtagttcggagtccaccgatagtgtaaccattgttgaagaaaaag tccgtatgaaaaagacagttggcctggttagcggtacatcccttatagttggaacgatcattggttctggtattttcata tcaccaagcggtgtgttagaggacactggttctgtaggattattccttattgtttggttggcatctggcgtcatagccct ccttggcgcactatgttactcagaaataggcacgttgataaagaaatctggtggagaatacgcgtacatccgtgaagcgt acggtaacgtactggctttcctgtacgcctggacctccgtcatcgtaatacgtacgtcatccatggccatcatctgcctg acgtttggcgaatacatgacgacatttttcccgtactgcggagcaccacagattcctaaaaagcttgtagctgcagttgc tctggtgactctaggagtgatcaatggttacagcaccaaacttgcaggtagaacacaagtattctttaccgttgtcaagc tggcggcacttgccataatagccattggtggaatcgtgagattagctcaaggttctggtattttcatatcaccaagcggt gtgttagaggacactggttctgtaggattattccttattgtctgggtggcatctggcgtcatagccctccttggcgcact atgttactcagaaataggcacgttgataaagagatctggtggagaatacgcgtacatccgtgaagcgtacggtaacgtac tggctttcctgtacgcctggacctccgtcatcgtaatacgtacgtcatccatggccatcatctgcctgacgtttggcgaa tacatgacgacatttttcccgtactgcggagcaccacagattcctaaaaagcttgtagctgcagttgctctggtgactct aggagtgatcaatggttacagcaccaaacttgcaggtagaacccaagtattctttaccgttgtcaagctggcggcacttg ccataatagccattggcggaatcgtgagattagctcaaggtcatacatcaaatcttcaggaaggttttaaaggcacaata agtaacccatctacggtagcattgggattctacaacgcactgtgggcatatgacggatggaataacttgaatgttgttac agaggaaatcatagatccggcaaaaaatttaccaagagcaaacatccttgcagttttatggtga |
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Protein
| Protein ID | pfu_aug2.0_819.1_31186.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_819.1_31186.t1 METTTFEDSFKENPLNGSTSTPMKNGSTPTRKRYNSDFGSSESTDSVTIVEEKVRMKKTVGLVSGTSLIVGTIIGSGIFI SPSGVLEDTGSVGLFLIVWLASGVIALLGALCYSEIGTLIKKSGGEYAYIREAYGNVLAFLYAWTSVIVIRTSSMAIICL TFGEYMTTFFPYCGAPQIPKKLVAAVALVTLGVINGYSTKLAGRTQVFFTVVKLAALAIIAIGGIVRLAQGSGIFISPSG VLEDTGSVGLFLIVWVASGVIALLGALCYSEIGTLIKRSGGEYAYIREAYGNVLAFLYAWTSVIVIRTSSMAIICLTFGE YMTTFFPYCGAPQIPKKLVAAVALVTLGVINGYSTKLAGRTQVFFTVVKLAALAIIAIGGIVRLAQGHTSNLQEGFKGTI SNPSTVALGFYNALWAYDGWNNLNVVTEEIIDPAKNLPRANILAVLW |
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