Genome browser

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug2.0_810.1_01153
Locus scaffold810.1 : 99046 ... 126535 : +
To GenomeBrowser scaffold810.1:99046..126535
Genes list of scaffold scaffold810.1
Synonym pfu_aug1.0_4814.1_16529

Manual annotation
Annotation by Blast2GO
Annotation GO
peptidyl-glycine alpha-amidating monooxygenase isoform x6 GO:0008152 GO:0016715

Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug2.0_810.1_01153.t1 2 1 Cu2_monooxygen 36 69 2.0e-29 102.2 0.00016 0.47 10.4
pfu_aug2.0_810.1_01153.t1 2 2 Cu2_monooxygen 76 186 2.0e-29 102.2 4.5e-29 1.3e-25 89.8
pfu_aug2.0_810.1_01153.t1 1 1 Cu2_monoox_C 209 256 2.2e-07 30.3 1.4e-10 4.2e-07 29.4
pfu_aug2.0_810.1_01153.t1 4 1 NHL 537 554 7.3e-23 79.3 0.00039 1.2 9.2
pfu_aug2.0_810.1_01153.t1 4 2 NHL 578 606 7.3e-23 79.3 5.9e-08 0.00017 21.3
pfu_aug2.0_810.1_01153.t1 4 3 NHL 636 662 7.3e-23 79.3 6.2e-10 1.8e-06 27.5
pfu_aug2.0_810.1_01153.t1 4 4 NHL 730 758 7.3e-23 79.3 8.4e-07 0.0025 17.6

Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug2.0_810.1_01153.t1 gi|676482308|ref|XP_009062656.1| hypothetical protein LOTGIDRAFT_128636, partial [Lottia gigantea] 0.0
pfu_aug2.0_810.1_01153.t1 gi|7682317|gb|AAF67216.1| peptidylglycine alpha-amidating monooxygenase [Aplysia californica] 0.0
pfu_aug2.0_810.1_01153.t1 gi|557279871|ref|XP_006022962.1| PREDICTED: peptidyl-glycine alpha-amidating monooxygenase isoform X3 [Alligator sinensis] 0.0
pfu_aug2.0_810.1_01153.t1 gi|557279869|ref|XP_006022961.1| PREDICTED: peptidyl-glycine alpha-amidating monooxygenase isoform X2 [Alligator sinensis] 0.0
pfu_aug2.0_810.1_01153.t1 gi|701398412|ref|XP_009968282.1| PREDICTED: peptidyl-glycine alpha-amidating monooxygenase, partial [Tyto alba] 0.0

Transcript
Transcript IDpfu_aug2.0_810.1_01153.t1
Definition-
>pfu_aug2.0_810.1_01153.t1
atggcaccaaccatgaagactttaaaaagagaccacgttcatatggtatctgttgttataattacaatgatttttccact
agttttgacacaaaaggagatcacgttggatgcagtgatgaaatcagcaaaacctacacggaatgatgagtatttatgta
gtagccataaattaccagccaatgaggagctctatatcattttgacacaaaaggagatcatgttggatgcagtgatgaaa
tcagcaaaacctacacggaatgatgagtatttatgtagtagccataaattaccagccaacgaggagctctatatcaccca
gtataaagcgatagcggatgccgggagggcacatcatatacttctgtttggttgtgatgaacctgcagtagacagtaaaa
cctggcattgtgggaggatatgtaagtctcaggaacagattctctttgcatgggctaaaaatgctgatcctcttgtactt
ccagacggtgtgggattcagagttggtgccaatacacaaataaaatatattgttgttcaagtgcattatgtacatccatt
gccagctggtgtacaatttgataattcaggaatatcattaaagctaacatctgccaggcagcggtatttagctggaattt
atctcttactagcttattctgtggtcatccctgggaagagcgaaaaggtccatgctgatatttcctgtcagttcaaagcc
tccggacctatatatccattcggttacagaacacatgcacatagcttagactgggagatgtacatacaattccactggaa
ggggcagatctacatatattgggcagcccacgggcatcatggtcacatgggtaacccagagggccatgatgaggaggtaa
aaacaacaccaaaggcgacacccaaacccacactggctccaaccactgccaaacctactacagaaaactttgacataggt
aatgttattgacgaaatactatcaaacaataagtacatacatccaaatgcactgagtagaaatactgatttggtcaatca
agataatatttatcaacaagaaagcgatggtatgtaccctcgggaatttatacccgattataacatgaatgattattaca
acgagttagagaatcagagagcaagaaaacggtttcattcatcgccctatgcctccaggcctacgtatcagcgtcgacct
ctgtacaaccttaataataatgacaatttggattattacgatgaagatgtgggtggatatcaatatggagagaaagatcc
gaatctatcgtcacgttacaaagggctgggagataagccagtcagaggaagggggaggggaaggttgagaaaccacagta
atgtggacgataatagtgctcagagaaataaaatgtttgaggaagcatacgctataagtctcgataagcaaaagtcaaca
actcttactgtgaaagatccccatccattggttgttaccaaggcaaccaaaatcagtctttcaatgccagaaatgaattt
cagcagcaaaaccaacctatcaatgccaattgcatcatcatatacaacaaagatggaagaatcatccggaaatttggaag
taaaatatgacaataacaatatctgggtgactgatgtagcacttcatcagattatgagattccctgagaacagcaacaaa
ccagacataatacttggtacacgttttaaacctggtaacgatgagagccacttctgtaagcctacagacgttgttgttct
caaatcgggagaattctttatcagtgatggttactgtaactctaggatcgctaggtttgatagcgcagggaaatatctgg
gagagtttggcagggaagacaactccttttcaaatagtgggactccacctgtagggtcgtttgaggtaccacatagtttg
gctttagcggaggataagggtttgttgtgtgtggctgacagagagaatggcaggatacaatgctttgatttagaaggcca
attccagaaacagattcacccacctgaattcggaaccagattgtttgctgtgtcttactgcccattacatggtggccttt
tatttgctgttaatggtccagcattcagctctgacatcacagtacaaggatttatcattgatataaatagtggtgaactc
attgaaacttggaatgctcagcctggtcttcaaaatccccatgatattgaggtggatccagtaaacaatagggtgtatgt
tggagaattagatcccaccaaagtatggagatttgatatgaaatcggatgatcactcaggttctatattccctgtctata
caacaacacttggtatggtcacagttaacagttctgagcccattatagaggatacaaagaaatcggtattagctgaggag
gaccaagttttaccggctataattatcggagcacttctcgttataccagttatcataatcattgttgtcgttgttgttat
aagagtttatagaaaaggccaatacaattgttgcggacaatataaatcacgctccagaaagaagtttaaccttggtaact
tcctcagtccacaccgaggattcgacagactgagtcaggacgagagtgatacagaatttgatccattaaatgactctgat
gaggaggaatacacaataagccgcaaagcttga

Protein
Protein IDpfu_aug2.0_810.1_01153.t1
Definition-
>pfu_aug2.0_810.1_01153.t1
MAPTMKTLKRDHVHMVSVVIITMIFPLVLTQKEITLDAVMKSAKPTRNDEYLCSSHKLPANEELYIILTQKEIMLDAVMK
SAKPTRNDEYLCSSHKLPANEELYITQYKAIADAGRAHHILLFGCDEPAVDSKTWHCGRICKSQEQILFAWAKNADPLVL
PDGVGFRVGANTQIKYIVVQVHYVHPLPAGVQFDNSGISLKLTSARQRYLAGIYLLLAYSVVIPGKSEKVHADISCQFKA
SGPIYPFGYRTHAHSLDWEMYIQFHWKGQIYIYWAAHGHHGHMGNPEGHDEEVKTTPKATPKPTLAPTTAKPTTENFDIG
NVIDEILSNNKYIHPNALSRNTDLVNQDNIYQQESDGMYPREFIPDYNMNDYYNELENQRARKRFHSSPYASRPTYQRRP
LYNLNNNDNLDYYDEDVGGYQYGEKDPNLSSRYKGLGDKPVRGRGRGRLRNHSNVDDNSAQRNKMFEEAYAISLDKQKST
TLTVKDPHPLVVTKATKISLSMPEMNFSSKTNLSMPIASSYTTKMEESSGNLEVKYDNNNIWVTDVALHQIMRFPENSNK
PDIILGTRFKPGNDESHFCKPTDVVVLKSGEFFISDGYCNSRIARFDSAGKYLGEFGREDNSFSNSGTPPVGSFEVPHSL
ALAEDKGLLCVADRENGRIQCFDLEGQFQKQIHPPEFGTRLFAVSYCPLHGGLLFAVNGPAFSSDITVQGFIIDINSGEL
IETWNAQPGLQNPHDIEVDPVNNRVYVGELDPTKVWRFDMKSDDHSGSIFPVYTTTLGMVTVNSSEPIIEDTKKSVLAEE
DQVLPAIIIGALLVIPVIIIIVVVVVIRVYRKGQYNCCGQYKSRSRKKFNLGNFLSPHRGFDRLSQDESDTEFDPLNDSD
EEEYTISRKA

  • MGU Home
  • Genome Projects
  • Information
  • Genome Browser
  • Blast Search
  • Keyword Search
  • Downloads

Gene ID:



Keyword:



  • Login

copyright © Marine Genomics Unit 2015
Okinawa Institute of Science and Technology
1919-1 Tancha, Onna-son, Kunigami-gun, Okinawa, Japan 904-0495