Gene
| Gene Model ID | pfu_aug2.0_7843.1_12955 |
|---|---|
| Locus | scaffold7843.1 : 5511 ... 12435 : - |
| To GenomeBrowser | scaffold7843.1:5511..12435 |
| Genes list of scaffold | scaffold7843.1 |
| Synonym | pfu_aug1.0_24492.1_62310 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_7843.1_12955.t1 | 2 | 1 | Prenyltrans_1 | 21 | 36 | 6.2e-06 | 26.1 | 0.0042 | 15.0 | 5.6 |
| pfu_aug2.0_7843.1_12955.t1 | 3 | 1 | Cobalamin_bind | 45 | 88 | 2.4e-20 | 72.4 | 0.057 | 210.0 | 0.3 |
| pfu_aug2.0_7843.1_12955.t1 | 3 | 2 | Cobalamin_bind | 94 | 286 | 2.4e-20 | 72.4 | 1.5e-23 | 5.7e-20 | 71.1 |
| pfu_aug2.0_7843.1_12955.t1 | 2 | 2 | Prenyltrans_1 | 179 | 224 | 6.2e-06 | 26.1 | 1.7e-06 | 0.0064 | 16.4 |
| pfu_aug2.0_7843.1_12955.t1 | 3 | 3 | Cobalamin_bind | 373 | 396 | 2.4e-20 | 72.4 | 0.5 | 1800.0 | -2.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_7843.1_12955.t1 | gi|585656874|ref|XP_006815749.1| | PREDICTED: uncharacterized protein CG3556-like [Saccoglossus kowalevskii] | 3.0e-20 |
| pfu_aug2.0_7843.1_12955.t1 | gi|742213740|ref|XP_010897174.1| | PREDICTED: transcobalamin-2-like [Esox lucius] | 3.0e-17 |
| pfu_aug2.0_7843.1_12955.t1 | gi|181344365|ref|NP_001116703.1| | transcobalamin-2 precursor [Danio rerio] | 9.0e-17 |
Transcript
| Transcript ID | pfu_aug2.0_7843.1_12955.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_7843.1_12955.t1 agaataaaccaaaagattctgatttcattaaaccagatgcgagtgtgcaaaaaacaccatatggagcagtaaacagtgga gtagaatggttgaggagacagcagcatgactacatgtggccacaaggacagagtgctgacgctgtgttagccctggggct tggcaaaatggacgaattcaacaaagacagctgtgaattcagattggccataaaaagtgctgaatttgatattctatcag caatgcttgcaaatggtaacctcaatgatgcaacatggggtagaggtgttcttgccaaatacatagtagctctgcgcacg gcatgtgttgatgttgcaatgttccataataacaataacctgcttactatgttgcaaacccaatacaacacctacaagaa ttactatgacggtgatagacgtgccttgtcttggtacgctctggccaggtgtaccgctggagaggcagtggggagtgata ttgtaaccagacttactgccaccccaggaacttacagcatgggagtagaggaggcagccatggtggccattgcactgtct tgtatggattatatgaacatgacaatgtacggaacagaaataatggccgcccacgactacatcatagcacaacaacgctc tgacggaacatttggtaatgagttcgagactgcccttgcacttcaggctttgaaaaactcaaatgtcacaaacctgagaa tgattcaagacaaagccttggaatatctttctactctcattcaagatacctataatgggcagtacaagaatctagcagct gcaagtcacattatgacggctctagcaggaaaatcttttgctgatgccaaaatggattgccctgagatgatgacgacaac gcccgctccaggacaggcaatacaaatcactatcagagttcgtggtggagtgattaacagctccatcagtcaggattaca tgataaccattcgtaggggaaacagtctataccaggcattacaattactacaaatacaacagtcctcttttatgtttact gctgtgaatacagctagaggaaatgtgattcagagtgtgatggaacttaatctgaacccaaacagtctgcagtactggaa aattatggagggcagcaatgatgttactagtatgggtgttgactatatcacaccgatggccagccaggtgtacactctag aagcagcttcttcctaa |
|
Protein
| Protein ID | pfu_aug2.0_7843.1_12955.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_7843.1_12955.t1 NKPKDSDFIKPDASVQKTPYGAVNSGVEWLRRQQHDYMWPQGQSADAVLALGLGKMDEFNKDSCEFRLAIKSAEFDILSA MLANGNLNDATWGRGVLAKYIVALRTACVDVAMFHNNNNLLTMLQTQYNTYKNYYDGDRRALSWYALARCTAGEAVGSDI VTRLTATPGTYSMGVEEAAMVAIALSCMDYMNMTMYGTEIMAAHDYIIAQQRSDGTFGNEFETALALQALKNSNVTNLRM IQDKALEYLSTLIQDTYNGQYKNLAAASHIMTALAGKSFADAKMDCPEMMTTTPAPGQAIQITIRVRGGVINSSISQDYM ITIRRGNSLYQALQLLQIQQSSFMFTAVNTARGNVIQSVMELNLNPNSLQYWKIMEGSNDVTSMGVDYITPMASQVYTLE AASS |
|