Gene
| Gene Model ID | pfu_aug2.0_770.1_01118 |
|---|---|
| Locus | scaffold770.1 : 136204 ... 176549 : + |
| To GenomeBrowser | scaffold770.1:136204..176549 |
| Genes list of scaffold | scaffold770.1 |
| Synonym | pfu_aug1.0_3149.1_37521 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| f-box lrr-repeat protein 7 | GO:0044424 GO:1903047 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_770.1_01118.t1 | 6 | 1 | LRR_8 | 202 | 212 | 1.9e-10 | 40.3 | 5.3 | 11000.0 | -3.8 |
| pfu_aug2.0_770.1_01118.t1 | 2 | 1 | F-box | 228 | 271 | 1.4e-06 | 27.8 | 6.5e-10 | 1.4e-06 | 27.8 |
| pfu_aug2.0_770.1_01118.t1 | 2 | 1 | F-box-like | 233 | 273 | 1.9e-11 | 43.5 | 8.8e-15 | 1.9e-11 | 43.5 |
| pfu_aug2.0_770.1_01118.t1 | 10 | 1 | LRR_1 | 303 | 315 | 7.6e-12 | 43.5 | 0.13 | 280.0 | 2.2 |
| pfu_aug2.0_770.1_01118.t1 | 6 | 2 | LRR_8 | 303 | 362 | 1.9e-10 | 40.3 | 0.00038 | 0.8 | 9.5 |
| pfu_aug2.0_770.1_01118.t1 | 11 | 1 | LRR_6 | 304 | 319 | 2.3e-20 | 70.3 | 0.52 | 1100.0 | 0.2 |
| pfu_aug2.0_770.1_01118.t1 | 11 | 2 | LRR_6 | 325 | 343 | 2.3e-20 | 70.3 | 0.27 | 570.0 | 1.1 |
| pfu_aug2.0_770.1_01118.t1 | 8 | 1 | LRR_4 | 326 | 365 | 1.1e-14 | 53.6 | 0.00014 | 0.31 | 10.7 |
| pfu_aug2.0_770.1_01118.t1 | 10 | 2 | LRR_1 | 328 | 341 | 7.6e-12 | 43.5 | 0.078 | 170.0 | 2.9 |
| pfu_aug2.0_770.1_01118.t1 | 11 | 3 | LRR_6 | 351 | 365 | 2.3e-20 | 70.3 | 0.81 | 1700.0 | -0.4 |
| pfu_aug2.0_770.1_01118.t1 | 10 | 3 | LRR_1 | 353 | 369 | 7.6e-12 | 43.5 | 0.019 | 40.0 | 4.8 |
| pfu_aug2.0_770.1_01118.t1 | 10 | 4 | LRR_1 | 388 | 400 | 7.6e-12 | 43.5 | 0.33 | 690.0 | 1.0 |
| pfu_aug2.0_770.1_01118.t1 | 11 | 4 | LRR_6 | 388 | 408 | 2.3e-20 | 70.3 | 0.17 | 350.0 | 1.7 |
| pfu_aug2.0_770.1_01118.t1 | 8 | 2 | LRR_4 | 388 | 422 | 1.1e-14 | 53.6 | 0.018 | 39.0 | 4.0 |
| pfu_aug2.0_770.1_01118.t1 | 6 | 3 | LRR_8 | 410 | 420 | 1.9e-10 | 40.3 | 0.047 | 100.0 | 2.7 |
| pfu_aug2.0_770.1_01118.t1 | 11 | 5 | LRR_6 | 411 | 435 | 2.3e-20 | 70.3 | 0.00019 | 0.41 | 10.8 |
| pfu_aug2.0_770.1_01118.t1 | 10 | 5 | LRR_1 | 413 | 426 | 7.6e-12 | 43.5 | 0.0072 | 15.0 | 6.0 |
| pfu_aug2.0_770.1_01118.t1 | 6 | 4 | LRR_8 | 413 | 471 | 1.9e-10 | 40.3 | 0.0068 | 14.0 | 5.4 |
| pfu_aug2.0_770.1_01118.t1 | 8 | 3 | LRR_4 | 413 | 453 | 1.1e-14 | 53.6 | 0.0031 | 6.5 | 6.4 |
| pfu_aug2.0_770.1_01118.t1 | 11 | 6 | LRR_6 | 437 | 461 | 2.3e-20 | 70.3 | 3.2e-05 | 0.068 | 13.2 |
| pfu_aug2.0_770.1_01118.t1 | 10 | 6 | LRR_1 | 440 | 459 | 7.6e-12 | 43.5 | 0.016 | 35.0 | 4.9 |
| pfu_aug2.0_770.1_01118.t1 | 6 | 5 | LRR_8 | 440 | 500 | 1.9e-10 | 40.3 | 0.0001 | 0.22 | 11.2 |
| pfu_aug2.0_770.1_01118.t1 | 8 | 4 | LRR_4 | 440 | 479 | 1.1e-14 | 53.6 | 0.00064 | 1.4 | 8.6 |
| pfu_aug2.0_770.1_01118.t1 | 8 | 5 | LRR_4 | 465 | 505 | 1.1e-14 | 53.6 | 8.6e-05 | 0.18 | 11.4 |
| pfu_aug2.0_770.1_01118.t1 | 10 | 7 | LRR_1 | 465 | 480 | 7.6e-12 | 43.5 | 0.25 | 540.0 | 1.3 |
| pfu_aug2.0_770.1_01118.t1 | 11 | 7 | LRR_6 | 465 | 483 | 2.3e-20 | 70.3 | 0.26 | 550.0 | 1.2 |
| pfu_aug2.0_770.1_01118.t1 | 2 | 2 | F-box | 482 | 494 | 1.4e-06 | 27.8 | 0.29 | 620.0 | 0.2 |
| pfu_aug2.0_770.1_01118.t1 | 2 | 2 | F-box-like | 483 | 494 | 1.9e-11 | 43.5 | 4.6 | 9700.0 | -3.6 |
| pfu_aug2.0_770.1_01118.t1 | 11 | 8 | LRR_6 | 489 | 512 | 2.3e-20 | 70.3 | 0.031 | 66.0 | 4.0 |
| pfu_aug2.0_770.1_01118.t1 | 8 | 6 | LRR_4 | 491 | 530 | 1.1e-14 | 53.6 | 0.0094 | 20.0 | 4.9 |
| pfu_aug2.0_770.1_01118.t1 | 10 | 8 | LRR_1 | 491 | 502 | 7.6e-12 | 43.5 | 0.026 | 55.0 | 4.3 |
| pfu_aug2.0_770.1_01118.t1 | 11 | 9 | LRR_6 | 515 | 535 | 2.3e-20 | 70.3 | 9.5e-07 | 0.002 | 17.9 |
| pfu_aug2.0_770.1_01118.t1 | 8 | 7 | LRR_4 | 517 | 551 | 1.1e-14 | 53.6 | 0.00033 | 0.71 | 9.5 |
| pfu_aug2.0_770.1_01118.t1 | 6 | 6 | LRR_8 | 517 | 579 | 1.9e-10 | 40.3 | 4.2e-06 | 0.0088 | 15.7 |
| pfu_aug2.0_770.1_01118.t1 | 10 | 9 | LRR_1 | 519 | 533 | 7.6e-12 | 43.5 | 0.18 | 380.0 | 1.8 |
| pfu_aug2.0_770.1_01118.t1 | 11 | 10 | LRR_6 | 540 | 564 | 2.3e-20 | 70.3 | 0.006 | 13.0 | 6.2 |
| pfu_aug2.0_770.1_01118.t1 | 8 | 8 | LRR_4 | 541 | 580 | 1.1e-14 | 53.6 | 4.3e-05 | 0.091 | 12.4 |
| pfu_aug2.0_770.1_01118.t1 | 11 | 11 | LRR_6 | 566 | 580 | 2.3e-20 | 70.3 | 0.0053 | 11.0 | 6.4 |
| pfu_aug2.0_770.1_01118.t1 | 10 | 10 | LRR_1 | 568 | 582 | 7.6e-12 | 43.5 | 0.012 | 26.0 | 5.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_770.1_01118.t1 | gi|676471318|ref|XP_009059139.1| | hypothetical protein LOTGIDRAFT_164359 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_770.1_01118.t1 | gi|704182193|ref|XP_010135828.1| | PREDICTED: F-box/LRR-repeat protein 7 [Buceros rhinoceros silvestris] | 0.0 |
| pfu_aug2.0_770.1_01118.t1 | gi|558134648|ref|XP_006117147.1| | PREDICTED: F-box/LRR-repeat protein 7 isoform X1 [Pelodiscus sinensis] | 0.0 |
| pfu_aug2.0_770.1_01118.t1 | gi|558134652|ref|XP_006117148.1| | PREDICTED: F-box/LRR-repeat protein 7 isoform X2 [Pelodiscus sinensis] | 0.0 |
| pfu_aug2.0_770.1_01118.t1 | gi|542150874|ref|XP_005484356.1| | PREDICTED: F-box/LRR-repeat protein 7 [Zonotrichia albicollis] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_770.1_01118.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_770.1_01118.t1 atgacgaccacgacgacgtacttcggacaaagtttccgctgtttaacaccgaccaagacaacttttcatatgttctatac ttgtcaaattgaccaaagcagaacggtgaatcgtagaaaaaagaaattatctactggaaagatattttatgtgcatagag attcctgccaggtcaacgattctgcgcacgactcttcttccggttttgcgtcagatgttccaagttatacatattccggg accagcatgtccacttttaagggcaaactatccgattctgacgacacttcctctgacaagaagaagccgcctccatggcc gggaaacacaacaacgcatgcgtataagaagccaaatcactacaatgcgcatgacttgaatatgccataccggatgtcaa ctccttctccttgctcataccgttcatcatcatccctgggtacaccgtcattaggtaccaccccatcgtccatttcaaat aaatcatcaaccaagtcaccgtacacaaacaataataatatccctacgcctagtccagtcatcagttataaaaaccccgc gtatgaatatcaactcgacaaacatatggagcaaattcaatacaatctaaaacgaattgaactccaagacacggacaaac ttttgtcgaagggatcatacagacatcacaagccttcgctgtttgacctccttacggatgacgtcattgtgaaaatattt tccaatctgccatcagaccagttatgtaggtcatcgcgcgtgtgcgaacgatggtacagactcgtttgggatccgatgct atggaaacgcattgtcatcaacagtgaaaaaataaatgtggacaaagctttgaagtatctcacaaagcgactatcgtaca atactccaacagtctgtgttatcgttgaacgaattaacttgaacggatgtgagaaactgaccaataaggggttacacacc gtggcaaagcgctgcccggaattacgtcatctggagatacagggttgctcaaacgtaactaaccaatctctgtacgaggt ggtgtcgtactgtgtcaacttagaacttttggatgttacaggttgcccatgcgttacgtgcatcagtctcacagatcgtg tcttgcagacggcaacggcgcatcacctccgacaagtctacctccgcattctggatatgacggattgctacgcgttagag gacgagggactcggagtgatagcatctcactgttcacagcttcagtatctatacctccgaaggtgtgtccgaataggaga cgctgggatccaatatgtcgccaattattgttcgtttttgaaagaactgagtatcagtgattgtcggaaaatcacagact atggaatttgtgaactggcaaaactcggtgataacttgcgatatcttagtatcgccaaatgtgataaagtttcagacgtt gggattattcagctgacgaaatgctgccggaagttacgatatttgaacatgcgcggttgcgaagcagtgtcagacgattc gatggacgtcttagccaggcattgtagcaaaattaagtcgttagatattggaaaatgtgatattacggacgaagggctgc aagttgttgcacaaaattgcccacagctcaagaaactaagtctcaaatcatgtgagggggtttccgacgtcggagtaaaa ctattggcgaaaaagtgccggcacctgcaacaacttaacattcaagactgccatcttactgtggacgcctataggacgat aaaaaagttctgtaaacaatgttttatagaacatacgaatcccggattttactga |
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Protein
| Protein ID | pfu_aug2.0_770.1_01118.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_770.1_01118.t1 MTTTTTYFGQSFRCLTPTKTTFHMFYTCQIDQSRTVNRRKKKLSTGKIFYVHRDSCQVNDSAHDSSSGFASDVPSYTYSG TSMSTFKGKLSDSDDTSSDKKKPPPWPGNTTTHAYKKPNHYNAHDLNMPYRMSTPSPCSYRSSSSLGTPSLGTTPSSISN KSSTKSPYTNNNNIPTPSPVISYKNPAYEYQLDKHMEQIQYNLKRIELQDTDKLLSKGSYRHHKPSLFDLLTDDVIVKIF SNLPSDQLCRSSRVCERWYRLVWDPMLWKRIVINSEKINVDKALKYLTKRLSYNTPTVCVIVERINLNGCEKLTNKGLHT VAKRCPELRHLEIQGCSNVTNQSLYEVVSYCVNLELLDVTGCPCVTCISLTDRVLQTATAHHLRQVYLRILDMTDCYALE DEGLGVIASHCSQLQYLYLRRCVRIGDAGIQYVANYCSFLKELSISDCRKITDYGICELAKLGDNLRYLSIAKCDKVSDV GIIQLTKCCRKLRYLNMRGCEAVSDDSMDVLARHCSKIKSLDIGKCDITDEGLQVVAQNCPQLKKLSLKSCEGVSDVGVK LLAKKCRHLQQLNIQDCHLTVDAYRTIKKFCKQCFIEHTNPGFY |
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