Gene
| Gene Model ID | pfu_aug2.0_77.1_23401 |
|---|---|
| Locus | scaffold77.1 : 485489 ... 493929 : - |
| To GenomeBrowser | scaffold77.1:485489..493929 |
| Genes list of scaffold | scaffold77.1 |
| Synonym | pfu_aug1.0_109.1_22002 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| membrane progestin receptor alpha | GO:0007165 GO:0008289 GO:0016020 GO:0019220 GO:0044710 GO:0048477 GO:0050790 GO:0071704 GO:0080090 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_77.1_23401.t1 | 2 | 1 | HlyIII | 54 | 273 | 4.1e-30 | 104.8 | 1.1e-33 | 4.1e-30 | 104.8 |
| pfu_aug2.0_77.1_23401.t1 | 2 | 2 | HlyIII | 301 | 318 | 4.1e-30 | 104.8 | 2.0 | 7600.0 | -4.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_77.1_23401.t1 | gi|524870156|ref|XP_005091864.1| | PREDICTED: membrane progestin receptor alpha-like isoform X1 [Aplysia californica] | 0.0 |
| pfu_aug2.0_77.1_23401.t1 | gi|676495329|ref|XP_009066855.1| | hypothetical protein LOTGIDRAFT_223258 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_77.1_23401.t1 | gi|34330174|ref|NP_899188.1| | membrane progestin receptor alpha-B [Danio rerio] | 0.0 |
| pfu_aug2.0_77.1_23401.t1 | gi|318103619|ref|NP_001187225.1| | putative membrane progestin receptor alpha [Ictalurus punctatus] | 0.0 |
| pfu_aug2.0_77.1_23401.t1 | gi|558149929|ref|XP_006120440.1| | PREDICTED: membrane progestin receptor alpha isoform X1 [Pelodiscus sinensis] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_77.1_23401.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_77.1_23401.t1 atgatgcgattacttcccttggatcggtttctctttcccgctgcagaaaatcagcagacgttacatgtttccaaggtgcc acgtgcgcttcatgagcccgccatattaggcgggtatcgaccaatcaacaaaccttggagatattatttcgccagcatct tccatattcacaacgaaactgtcaacgtttggacacatttagtagcgacaattgtactgattctggtgcttctagattgt atctcggactacggtagtggtaacaaacatttatggccaatggtaatctttctactcacgtgcatttgcacatgtctagt cagttcgctggttcatcttcttcattccaagtcaacagacatccattattgtgctttcatgatagattacattggggtga acacctatgcttttgggaccggagtcattgcattctactcatgttcagacgaagaaacgtataattatttaggaacatac tacatgccaattttaactatcgctacgtggttcaactacatcacattttgttctgcaaagctattatacggagaaaatcc atatagtatgaggaaaaagctgatttatataaccggcactttgattctggcagtatttctcagtgcaccttttgcatcca ggtactggaattgtttccgctcatcagagtgttcgatgagttccttgaatcacgtgaccctttgctttccactcttcata atcgaagcgttctttttcgggagtcatatccctgaaaaattgataccaggaaagtgtgatatcataggtcaaggtcacca aatatttcatgttatatccacaatcacccagcttatgcaaatccgagctgtccgaatcgactatacaattggtgcgtccg accacactcatccccatttagctcatctctcaggggctacattcgccgtcatatttctcaatgcattgactttcctgtat ttcaagaaattaattggcaagaagcaaaccaagaattattga |
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Protein
| Protein ID | pfu_aug2.0_77.1_23401.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_77.1_23401.t1 MMRLLPLDRFLFPAAENQQTLHVSKVPRALHEPAILGGYRPINKPWRYYFASIFHIHNETVNVWTHLVATIVLILVLLDC ISDYGSGNKHLWPMVIFLLTCICTCLVSSLVHLLHSKSTDIHYCAFMIDYIGVNTYAFGTGVIAFYSCSDEETYNYLGTY YMPILTIATWFNYITFCSAKLLYGENPYSMRKKLIYITGTLILAVFLSAPFASRYWNCFRSSECSMSSLNHVTLCFPLFI IEAFFFGSHIPEKLIPGKCDIIGQGHQIFHVISTITQLMQIRAVRIDYTIGASDHTHPHLAHLSGATFAVIFLNALTFLY FKKLIGKKQTKNY |
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