Gene
| Gene Model ID | pfu_aug2.0_7509.1_32955 |
|---|---|
| Locus | scaffold7509.1 : 11263 ... 13355 : - |
| To GenomeBrowser | scaffold7509.1:11263..13355 |
| Genes list of scaffold | scaffold7509.1 |
| Synonym | pfu_aug1.0_13951.1_46695 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_7509.1_32955.t1 | 2 | 1 | zf-C3HC4_3 | 11 | 64 | 1.9e-07 | 30.6 | 1.8e-10 | 1.9e-07 | 30.6 |
| pfu_aug2.0_7509.1_32955.t1 | 2 | 1 | zf-RING_5 | 12 | 61 | 3.4e-09 | 36.2 | 3.2e-12 | 3.4e-09 | 36.2 |
| pfu_aug2.0_7509.1_32955.t1 | 3 | 1 | zf-RING_2 | 12 | 60 | 7.3e-09 | 35.3 | 6.9e-12 | 7.3e-09 | 35.3 |
| pfu_aug2.0_7509.1_32955.t1 | 2 | 1 | zf-C3HC4 | 13 | 59 | 3.8e-09 | 36.0 | 3.6e-12 | 3.8e-09 | 36.0 |
| pfu_aug2.0_7509.1_32955.t1 | 2 | 1 | zf-RING_UBOX | 13 | 57 | 6.3e-08 | 32.2 | 1.3e-10 | 1.4e-07 | 31.0 |
| pfu_aug2.0_7509.1_32955.t1 | 2 | 1 | zf-C3HC4_2 | 13 | 59 | 6.4e-08 | 32.4 | 6.0e-11 | 6.4e-08 | 32.4 |
| pfu_aug2.0_7509.1_32955.t1 | 3 | 1 | zf-C3HC4_4 | 13 | 59 | 8.5e-06 | 25.5 | 8.1e-09 | 8.5e-06 | 25.5 |
| pfu_aug2.0_7509.1_32955.t1 | 4 | 1 | zf-B_box | 28 | 37 | 3.7e-07 | 29.9 | 7.1 | 7500.0 | -3.1 |
| pfu_aug2.0_7509.1_32955.t1 | 4 | 2 | zf-B_box | 56 | 60 | 3.7e-07 | 29.9 | 4.8 | 5100.0 | -2.6 |
| pfu_aug2.0_7509.1_32955.t1 | 2 | 2 | zf-RING_5 | 102 | 134 | 3.4e-09 | 36.2 | 0.0083 | 8.8 | 6.1 |
| pfu_aug2.0_7509.1_32955.t1 | 2 | 2 | zf-C3HC4_3 | 102 | 131 | 1.9e-07 | 30.6 | 1.9 | 2000.0 | -1.5 |
| pfu_aug2.0_7509.1_32955.t1 | 2 | 2 | zf-C3HC4_2 | 105 | 133 | 6.4e-08 | 32.4 | 0.68 | 720.0 | 0.3 |
| pfu_aug2.0_7509.1_32955.t1 | 4 | 3 | zf-B_box | 115 | 146 | 3.7e-07 | 29.9 | 4.4e-07 | 0.00047 | 20.0 |
| pfu_aug2.0_7509.1_32955.t1 | 3 | 2 | zf-RING_2 | 117 | 132 | 7.3e-09 | 35.3 | 3.9 | 4200.0 | -2.4 |
| pfu_aug2.0_7509.1_32955.t1 | 3 | 2 | zf-C3HC4_4 | 117 | 129 | 8.5e-06 | 25.5 | 7.8 | 8300.0 | -3.3 |
| pfu_aug2.0_7509.1_32955.t1 | 2 | 2 | zf-C3HC4 | 120 | 131 | 3.8e-09 | 36.0 | 6.9 | 7400.0 | -3.3 |
| pfu_aug2.0_7509.1_32955.t1 | 4 | 4 | zf-B_box | 162 | 193 | 3.7e-07 | 29.9 | 2.1e-08 | 2.3e-05 | 24.2 |
| pfu_aug2.0_7509.1_32955.t1 | 3 | 3 | zf-RING_2 | 174 | 194 | 7.3e-09 | 35.3 | 1.1 | 1200.0 | -0.6 |
| pfu_aug2.0_7509.1_32955.t1 | 3 | 3 | zf-C3HC4_4 | 182 | 188 | 8.5e-06 | 25.5 | 4.7 | 5000.0 | -2.6 |
| pfu_aug2.0_7509.1_32955.t1 | 2 | 2 | zf-RING_UBOX | 265 | 276 | 6.3e-08 | 32.2 | 0.52 | 560.0 | 0.3 |
Transcript
| Transcript ID | pfu_aug2.0_7509.1_32955.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_7509.1_32955.t1 atggcggaggcacactcggtagacgatttaacacactgccccatctgctttgaaaagtatgatagaccaagatacctacc atgcctgcatacattctgtgagaaatgcttacaaacgtatattgatacaactgttggaaacgattctaaaacggagggtt tcaactgcccaacttgtcgacgactcatagaggtccctgcgagtgaggatgtgcaatggggtaatatggcagagacgttt ccattgaatcacttgattgtaactttaatggatattatgttatccgcagaaactttgaaattttgtgggccatgtagaaa gagatccatagaggtgccgccgatgtcctggtgtaaagattgtaaagagtttctatgtggacaatgcgtggaatatcaca agactttgccgattcttgaaggacatctcattgaaactctgaaagacatcaatgaggtcgatgtcatttctacaccgaca tttcattgtgaaaaacatccagataaaaaactagaaatgttttgtgaagatcacgatattccttgctgtatgtcctgtac aatgactgaacatagaaaatgtgaacgggttgaaaccttggaaaacgtcgttaagagaaggaatctagtttcaatgaggg aagacgtcgcagaacaattttcaaacgttctcgaaaatcttaatgaaagtattacaacgaaaagagattcatataaacgt ttcaatgagcagtgtgatgaaatgaaaagcaaagtacaggaaacaacagcgcaaattactactcatgtaaaaactctttg ctctgatgcattagaagagctatcaacaatcaaagacaagcaggaacttatttctctttcggacattggatacttgaaag aacgaaaaaacgtcatagaaagataccaaagatttctttcagtgaaaacagaagaaatgccagcaattcattcatttatg gaaatgagaagactgacagaatgcctagcagtcttcaaggaaatgaaaacggcaacaacgactggaggtggttttaatca tgaagtagatggaagaatacttgagattttggatgtaaaaacaatattagcgcagaaagagcaggaaaataccgattcaa gtaatgaaagtgacacggaaaattccacaagctttgaaaacgtgacatacaaaacaattacatataggtccactctcaat tttgaaacacggaaaaagaatactttcatctctaactgtgtctttctagagacaggatgtcttttgatcgtagattacaa agttcgggaatccaacgatggaattctaagactttatgactcggatatgacaaacttcaaaactattcgtatatctggta aaccatgggctgctgcggaactgaatgaacattttattgccgtcacgattcccgccaatgaaacaatctgttttttaaaa acatcaacattagaaccaatttatcagcaatgcgacagaaaattttttggcattaccgttaaggaaggacttccaaatat gtacccggacggagaagataaagagtactttgaaaaatgctgcttctttgtctcatcaaaaggagaggtccatctaagat cattttcaggaaaaactcttcgaacactaaatatttcatcaacatatatccaacacatcagttattgcgacggcgagatc ttcttcagcgcaaaagataatttacattatgtcaaagaagatggaggttccatatttgaattccctgatctgattcttca ggggacctctggattgaccataggtaacaatggagatcttgctgtttgttgtcggaaatctaatatggttgtcatcattg atgaagatgggaaagaaaaaactaaagtacaggttgattcaccaagttgtgttgcttttagttcagattgtaacacattg tgtgttgtgcaaggaggcccaagtatagacaatcgaggctttgtgtatgatattgtatatgataaatga |
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Protein
| Protein ID | pfu_aug2.0_7509.1_32955.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_7509.1_32955.t1 MAEAHSVDDLTHCPICFEKYDRPRYLPCLHTFCEKCLQTYIDTTVGNDSKTEGFNCPTCRRLIEVPASEDVQWGNMAETF PLNHLIVTLMDIMLSAETLKFCGPCRKRSIEVPPMSWCKDCKEFLCGQCVEYHKTLPILEGHLIETLKDINEVDVISTPT FHCEKHPDKKLEMFCEDHDIPCCMSCTMTEHRKCERVETLENVVKRRNLVSMREDVAEQFSNVLENLNESITTKRDSYKR FNEQCDEMKSKVQETTAQITTHVKTLCSDALEELSTIKDKQELISLSDIGYLKERKNVIERYQRFLSVKTEEMPAIHSFM EMRRLTECLAVFKEMKTATTTGGGFNHEVDGRILEILDVKTILAQKEQENTDSSNESDTENSTSFENVTYKTITYRSTLN FETRKKNTFISNCVFLETGCLLIVDYKVRESNDGILRLYDSDMTNFKTIRISGKPWAAAELNEHFIAVTIPANETICFLK TSTLEPIYQQCDRKFFGITVKEGLPNMYPDGEDKEYFEKCCFFVSSKGEVHLRSFSGKTLRTLNISSTYIQHISYCDGEI FFSAKDNLHYVKEDGGSIFEFPDLILQGTSGLTIGNNGDLAVCCRKSNMVVIIDEDGKEKTKVQVDSPSCVAFSSDCNTL CVVQGGPSIDNRGFVYDIVYDK |
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