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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug2.0_702.1_07812
Locus scaffold702.1 : 171327 ... 190525 : -
To GenomeBrowser scaffold702.1:171327..190525
Genes list of scaffold scaffold702.1
Synonym NA

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug2.0_702.1_07812.t1 1 1 IP_trans 1 227 0.0 225.3 0.0 0.0 225.0

Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug2.0_702.1_07812.t1 gi|524877322|ref|XP_005095365.1| PREDICTED: cytoplasmic phosphatidylinositol transfer protein 1-like isoform X1 [Aplysia californica] 0.0
pfu_aug2.0_702.1_07812.t1 gi|676428717|ref|XP_009045366.1| hypothetical protein LOTGIDRAFT_212050 [Lottia gigantea] 0.0
pfu_aug2.0_702.1_07812.t1 gi|572257888|ref|XP_006607340.1| PREDICTED: cytoplasmic phosphatidylinositol transfer protein 1-like [Apis dorsata] 0.0
pfu_aug2.0_702.1_07812.t1 gi|380017195|ref|XP_003692546.1| PREDICTED: cytoplasmic phosphatidylinositol transfer protein 1 [Apis florea] 0.0
pfu_aug2.0_702.1_07812.t1 gi|66532731|ref|XP_396720.2| PREDICTED: cytoplasmic phosphatidylinositol transfer protein 1 [Apis mellifera] 0.0

Transcript
Transcript IDpfu_aug2.0_702.1_07812.t1
Definition-
>pfu_aug2.0_702.1_07812.t1
atgcctatgacagtagaggagtacaagataggacaactttatatgatagccaaacatagccatgagcaaagtgagaatgg
ggaaggtgtagaagttgtcacaaacgaggagtgtgatcatgaaactcacggtaaaggacagttcacagaaaaacgtgtct
acctctcaagtcgcttaccatcgtggatccgatctttaattcccaatatattctacatcacagagaaagcctggaatttc
tatccattcactattacagattataaaaagtataaacggaagaaattcaatgtgtttttgaatccccatataaaacattg
tatgtgtgaacttagtgaggaagatttggctgtaaggactgtggagcatattgatatagcttatgatgaaatagcagaga
aaaattataaagaggcagaggatccagtgaagtttaagtccaagaagacagggcggggtttattacaaaaagactggaag
gaaaatacctcaccaatcatgtgttcatataaagctgtaaaggtcaagtttgaggtgtggggattgcaaacaaaagtgga
agattttgcccatagatcaatacgtgatatattattactaggacacagacaggcttttgcttggatagatgaatggatag
atatgagctttgaagacataagagattatgagaaaaaaatgcatgcagagaccaatgataaagtactgaatggagtatag

Protein
Protein IDpfu_aug2.0_702.1_07812.t1
Definition-
>pfu_aug2.0_702.1_07812.t1
MPMTVEEYKIGQLYMIAKHSHEQSENGEGVEVVTNEECDHETHGKGQFTEKRVYLSSRLPSWIRSLIPNIFYITEKAWNF
YPFTITDYKKYKRKKFNVFLNPHIKHCMCELSEEDLAVRTVEHIDIAYDEIAEKNYKEAEDPVKFKSKKTGRGLLQKDWK
ENTSPIMCSYKAVKVKFEVWGLQTKVEDFAHRSIRDILLLGHRQAFAWIDEWIDMSFEDIRDYEKKMHAETNDKVLNGV

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