Gene
| Gene Model ID | pfu_aug2.0_673.1_11070 |
|---|---|
| Locus | scaffold673.1 : 171960 ... 189253 : + |
| To GenomeBrowser | scaffold673.1:171960..189253 |
| Genes list of scaffold | scaffold673.1 |
| Synonym | pfu_aug1.0_30712.1_62619 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| transient receptor potential cation channel subfamily m member 2-like isoform x2 | GO:0006810 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_673.1_11070.t1 | 1 | 1 | Ion_trans | 312 | 440 | 6.2e-08 | 32.1 | 8.6e-12 | 1.3e-07 | 31.1 |
Transcript
| Transcript ID | pfu_aug2.0_673.1_11070.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_673.1_11070.t1 atgttaggaagtctggacgatatcatgtttgaggccatcatagcacacaaagctgacttcgtagacttactgatagacaa tggggtgtctcttaaagaattcctcaccaaggaaaggctgctacagctctatgacctggctccaaaaaattctttgttgt actcctgtttgatgaagtcaaaggcaaaacatggaaacagatctgaagccatttctctcaaagacatccggcgtttgacc aaacttttgatttctgttagcattcaaccgtacttatcaaagcctgctaataaaatcactcgtgttggcagcaagagaaa tgaatgtcgatttccctccgaggacctctttctttgggcagtactcatgcatcatcaggaactggcaaaattgttctgga aacttggaaaagatgccacggccaatgctctaatagcctttggaattcttcgggctctatcaaacaagacagaggatacc gaacttagaaacaagttgcttagagacgctgatgaattcgggaacttggcagtgggagttctgacagaatgcttcgaaag tgatgaaagaaagactcatatgttgttaatgaagaagttggagcagtgcgaggggataatttgtttggacatagccctga agaccaacaatatgatgttcatagcacataaagcttgtcaatccttttatagagatgtctggatggggaatctctgcgct gaaaacggcacatgtaggttactgctgtcaccaatacttcttggactatttatcctgagagtaaaagaacccagcatgcc cattaagtatacagagggggacgatcttgtagatggcgtggacagaggacgaagaaagggaagttcctttgacaaggcaa ttcgtgaagggactgaattctcatccagtgttacacatgtatcactcagagacatacagaggaaagcatcggagcttggt cccaaaatcatcatgatccgcagaatgatggtagatttggtgttttttatgataatattgatggtatttgtgtcggggta cgccatcgttacatatgccctcctctatccgaacgcggacatgaagatggaaaccgtaggggacattcttaaatttggtt actggtcactgtacggagaattctttctggaggagatgcaagcaaaagaccgtaactgttcggcgagacacagtacagct tccttcacagagaacggtgaggtgttcagatgtccactacatagagacgtagccattatcctaatgggcatgtatgtctt attctccaaccttctgcttctgaacatcctgatcgcaatgttcagtaacacctttcaaatggtacacgacaacactgaca aattatggaactatatgaggtgcacgttgattagggagttcgtaaacaaacctttcctccctgctcccctcagtctacca atctatgtatggatgttcgtcaagtgggtccttagaagattatttggattctgcactattcaggaagtagagacaaatga gtgccttgatcgagaaaccacacagtgggaaaatgttattgctgatgcctacatgcagcgtctgaagaaaggagaggaag aaagtatggaaaatgtagtggctgaacttcataaaaagtttgaagacatatggcaaagagagtacgatcaaatacagtgc tatcaagacgggatatcgacggagaaacaactacaaaccatagatgcaaaagttagcaaaattatcaaccttcttcgggc aattcaaatagactccgggcattcggatatggatgatcattcatgtaggaattcgacctgtatcgacaatggacagagtc gcaaaaccagtcaaagctccgaggggcacggttttccagtcgatgagactgcagaaggaggtagcgctgttaaagaatca aatggagatcgggatcgtccagccgatggaaccactgaaaaatacagttacaaagttaatatctgcagtcgtccagtcag tgacagctccgatcataataagaccattgaacagcgtttgtccaatggtacaacaggaattcaattggctgaagcctaca gagttcatggcagttttcaagacgcgggaagtcgtgaacctaacaaggaaaccaaccaaacccatgaagattacgatggg gatgatgacatttttaatgaaggatag |
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Protein
| Protein ID | pfu_aug2.0_673.1_11070.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_673.1_11070.t1 MLGSLDDIMFEAIIAHKADFVDLLIDNGVSLKEFLTKERLLQLYDLAPKNSLLYSCLMKSKAKHGNRSEAISLKDIRRLT KLLISVSIQPYLSKPANKITRVGSKRNECRFPSEDLFLWAVLMHHQELAKLFWKLGKDATANALIAFGILRALSNKTEDT ELRNKLLRDADEFGNLAVGVLTECFESDERKTHMLLMKKLEQCEGIICLDIALKTNNMMFIAHKACQSFYRDVWMGNLCA ENGTCRLLLSPILLGLFILRVKEPSMPIKYTEGDDLVDGVDRGRRKGSSFDKAIREGTEFSSSVTHVSLRDIQRKASELG PKIIMIRRMMVDLVFFMIILMVFVSGYAIVTYALLYPNADMKMETVGDILKFGYWSLYGEFFLEEMQAKDRNCSARHSTA SFTENGEVFRCPLHRDVAIILMGMYVLFSNLLLLNILIAMFSNTFQMVHDNTDKLWNYMRCTLIREFVNKPFLPAPLSLP IYVWMFVKWVLRRLFGFCTIQEVETNECLDRETTQWENVIADAYMQRLKKGEEESMENVVAELHKKFEDIWQREYDQIQC YQDGISTEKQLQTIDAKVSKIINLLRAIQIDSGHSDMDDHSCRNSTCIDNGQSRKTSQSSEGHGFPVDETAEGGSAVKES NGDRDRPADGTTEKYSYKVNICSRPVSDSSDHNKTIEQRLSNGTTGIQLAEAYRVHGSFQDAGSREPNKETNQTHEDYDG DDDIFNEG |
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