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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug2.0_673.1_11067
Locus scaffold673.1 : 132981 ... 138165 : -
To GenomeBrowser scaffold673.1:132981..138165
Genes list of scaffold scaffold673.1
Synonym pfu_aug1.0_22655.1_47531

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug2.0_673.1_11067.t1 28 1 LRR_1 40 53 0.0 155.3 4.1 7600.0 -2.2
pfu_aug2.0_673.1_11067.t1 15 1 LRR_8 70 120 0.0 223.1 5.2e-12 9.5e-09 34.8
pfu_aug2.0_673.1_11067.t1 28 2 LRR_1 71 83 0.0 155.3 2.6 4700.0 -1.6
pfu_aug2.0_673.1_11067.t1 26 1 LRR_7 71 78 3.2e-31 101.7 6.6 12000.0 -2.5
pfu_aug2.0_673.1_11067.t1 17 1 LRR_4 71 96 0.0 261.5 1.5e-06 0.0029 17.2
pfu_aug2.0_673.1_11067.t1 9 1 LRR_9 84 146 4.9e-10 39.2 0.077 140.0 1.8
pfu_aug2.0_673.1_11067.t1 23 1 LRR_6 85 98 5.8e-22 75.2 0.013 24.0 5.3
pfu_aug2.0_673.1_11067.t1 17 2 LRR_4 85 125 0.0 261.5 5.0e-13 9.3e-10 37.9
pfu_aug2.0_673.1_11067.t1 28 3 LRR_1 86 105 0.0 155.3 0.0011 2.0 8.7
pfu_aug2.0_673.1_11067.t1 26 2 LRR_7 86 101 3.2e-31 101.7 0.14 260.0 2.5
pfu_aug2.0_673.1_11067.t1 23 2 LRR_6 107 121 5.8e-22 75.2 0.001 1.9 8.8
pfu_aug2.0_673.1_11067.t1 28 4 LRR_1 109 125 0.0 155.3 0.00012 0.23 11.6
pfu_aug2.0_673.1_11067.t1 26 3 LRR_7 109 124 3.2e-31 101.7 0.00013 0.24 11.7
pfu_aug2.0_673.1_11067.t1 15 2 LRR_8 131 169 0.0 223.1 0.0014 2.6 7.8
pfu_aug2.0_673.1_11067.t1 17 3 LRR_4 132 170 0.0 261.5 5.6e-07 0.001 18.6
pfu_aug2.0_673.1_11067.t1 28 5 LRR_1 133 150 0.0 155.3 4.0 7400.0 -2.2
pfu_aug2.0_673.1_11067.t1 23 3 LRR_6 153 166 5.8e-22 75.2 1.9 3600.0 -1.4
pfu_aug2.0_673.1_11067.t1 28 6 LRR_1 156 169 0.0 155.3 2.0 3700.0 -1.2
pfu_aug2.0_673.1_11067.t1 9 2 LRR_9 158 188 4.9e-10 39.2 0.099 180.0 1.5
pfu_aug2.0_673.1_11067.t1 15 3 LRR_8 179 233 0.0 223.1 4.2e-12 7.7e-09 35.1
pfu_aug2.0_673.1_11067.t1 28 7 LRR_1 180 197 0.0 155.3 0.052 97.0 3.6
pfu_aug2.0_673.1_11067.t1 17 4 LRR_4 181 214 0.0 261.5 7.8e-05 0.14 11.7
pfu_aug2.0_673.1_11067.t1 26 4 LRR_7 182 191 3.2e-31 101.7 1.3 2300.0 -0.3
pfu_aug2.0_673.1_11067.t1 23 4 LRR_6 197 211 5.8e-22 75.2 0.32 590.0 1.1
pfu_aug2.0_673.1_11067.t1 26 5 LRR_7 198 214 3.2e-31 101.7 0.006 11.0 6.7
pfu_aug2.0_673.1_11067.t1 28 8 LRR_1 200 218 0.0 155.3 0.0016 2.9 8.2
pfu_aug2.0_673.1_11067.t1 9 3 LRR_9 200 255 4.9e-10 39.2 2.5e-05 0.047 13.2
pfu_aug2.0_673.1_11067.t1 23 5 LRR_6 221 235 5.8e-22 75.2 0.00028 0.52 10.5
pfu_aug2.0_673.1_11067.t1 15 4 LRR_8 222 280 0.0 223.1 7.2e-09 1.3e-05 24.8
pfu_aug2.0_673.1_11067.t1 26 6 LRR_7 222 237 3.2e-31 101.7 0.00029 0.53 10.7
pfu_aug2.0_673.1_11067.t1 17 5 LRR_4 222 260 0.0 261.5 1.9e-09 3.5e-06 26.4
pfu_aug2.0_673.1_11067.t1 28 9 LRR_1 223 242 0.0 155.3 3.6e-05 0.066 13.2
pfu_aug2.0_673.1_11067.t1 23 6 LRR_6 244 257 5.8e-22 75.2 0.044 81.0 3.7
pfu_aug2.0_673.1_11067.t1 26 7 LRR_7 245 260 3.2e-31 101.7 0.17 320.0 2.3
pfu_aug2.0_673.1_11067.t1 28 10 LRR_1 246 265 0.0 155.3 0.0058 11.0 6.5
pfu_aug2.0_673.1_11067.t1 17 6 LRR_4 270 307 0.0 261.5 2.0e-10 3.6e-07 29.6
pfu_aug2.0_673.1_11067.t1 15 5 LRR_8 270 326 0.0 223.1 1.4e-10 2.7e-07 30.2
pfu_aug2.0_673.1_11067.t1 28 11 LRR_1 270 289 0.0 155.3 0.033 61.0 4.2
pfu_aug2.0_673.1_11067.t1 26 8 LRR_7 270 284 3.2e-31 101.7 0.04 74.0 4.2
pfu_aug2.0_673.1_11067.t1 23 7 LRR_6 270 281 5.8e-22 75.2 1.5 2800.0 -1.1
pfu_aug2.0_673.1_11067.t1 9 4 LRR_9 273 342 4.9e-10 39.2 0.00013 0.24 10.9
pfu_aug2.0_673.1_11067.t1 23 8 LRR_6 290 304 5.8e-22 75.2 0.064 120.0 3.2
pfu_aug2.0_673.1_11067.t1 15 6 LRR_8 292 348 0.0 223.1 1.2e-11 2.2e-08 33.7
pfu_aug2.0_673.1_11067.t1 28 12 LRR_1 292 310 0.0 155.3 0.0044 8.2 6.8
pfu_aug2.0_673.1_11067.t1 26 9 LRR_7 292 307 3.2e-31 101.7 0.00034 0.63 10.4
pfu_aug2.0_673.1_11067.t1 17 7 LRR_4 293 334 0.0 261.5 1.7e-09 3.1e-06 26.6
pfu_aug2.0_673.1_11067.t1 23 9 LRR_6 313 328 5.8e-22 75.2 0.00019 0.36 11.0
pfu_aug2.0_673.1_11067.t1 17 8 LRR_4 314 349 0.0 261.5 9.1e-08 0.00017 21.1
pfu_aug2.0_673.1_11067.t1 28 13 LRR_1 315 337 0.0 155.3 0.00034 0.62 10.2
pfu_aug2.0_673.1_11067.t1 26 10 LRR_7 315 328 3.2e-31 101.7 0.0088 16.0 6.2
pfu_aug2.0_673.1_11067.t1 9 5 LRR_9 315 362 4.9e-10 39.2 0.0063 12.0 5.4
pfu_aug2.0_673.1_11067.t1 23 10 LRR_6 335 349 5.8e-22 75.2 1.3 2500.0 -0.9
pfu_aug2.0_673.1_11067.t1 17 9 LRR_4 337 372 0.0 261.5 2.3e-08 4.3e-05 23.0
pfu_aug2.0_673.1_11067.t1 15 7 LRR_8 337 394 0.0 223.1 2.8e-07 0.00051 19.7
pfu_aug2.0_673.1_11067.t1 26 11 LRR_7 343 352 3.2e-31 101.7 8.0 15000.0 -3.4
pfu_aug2.0_673.1_11067.t1 23 11 LRR_6 358 371 5.8e-22 75.2 0.0071 13.0 6.2
pfu_aug2.0_673.1_11067.t1 28 14 LRR_1 360 379 0.0 155.3 5.2e-05 0.097 12.7
pfu_aug2.0_673.1_11067.t1 26 12 LRR_7 360 375 3.2e-31 101.7 0.026 48.0 4.8
pfu_aug2.0_673.1_11067.t1 9 6 LRR_9 362 435 4.9e-10 39.2 8.1e-06 0.015 14.8
pfu_aug2.0_673.1_11067.t1 23 12 LRR_6 383 395 5.8e-22 75.2 1.9 3500.0 -1.3
pfu_aug2.0_673.1_11067.t1 15 8 LRR_8 384 440 0.0 223.1 1.3e-08 2.5e-05 23.9
pfu_aug2.0_673.1_11067.t1 28 15 LRR_1 384 402 0.0 155.3 0.17 320.0 2.0
pfu_aug2.0_673.1_11067.t1 26 13 LRR_7 384 398 3.2e-31 101.7 5.3 9800.0 -2.2
pfu_aug2.0_673.1_11067.t1 17 10 LRR_4 388 415 0.0 261.5 0.00062 1.1 8.9
pfu_aug2.0_673.1_11067.t1 23 13 LRR_6 405 418 5.8e-22 75.2 0.012 22.0 5.5
pfu_aug2.0_673.1_11067.t1 15 9 LRR_8 407 463 0.0 223.1 2.6e-10 4.8e-07 29.4
pfu_aug2.0_673.1_11067.t1 17 11 LRR_4 408 444 0.0 261.5 4.8e-11 8.9e-08 31.5
pfu_aug2.0_673.1_11067.t1 28 16 LRR_1 408 427 0.0 155.3 0.0017 3.2 8.1
pfu_aug2.0_673.1_11067.t1 26 14 LRR_7 408 421 3.2e-31 101.7 0.016 30.0 5.4
pfu_aug2.0_673.1_11067.t1 23 14 LRR_6 427 441 5.8e-22 75.2 0.028 52.0 4.3
pfu_aug2.0_673.1_11067.t1 15 10 LRR_8 429 470 0.0 223.1 9.6e-07 0.0018 18.0
pfu_aug2.0_673.1_11067.t1 28 17 LRR_1 429 448 0.0 155.3 0.0095 18.0 5.8
pfu_aug2.0_673.1_11067.t1 26 15 LRR_7 429 444 3.2e-31 101.7 0.012 22.0 5.8
pfu_aug2.0_673.1_11067.t1 23 15 LRR_6 450 464 5.8e-22 75.2 0.036 67.0 4.0
pfu_aug2.0_673.1_11067.t1 17 12 LRR_4 453 481 0.0 261.5 0.0079 15.0 5.3
pfu_aug2.0_673.1_11067.t1 28 18 LRR_1 453 471 0.0 155.3 0.011 20.0 5.7
pfu_aug2.0_673.1_11067.t1 26 16 LRR_7 453 465 3.2e-31 101.7 0.13 230.0 2.7
pfu_aug2.0_673.1_11067.t1 23 16 LRR_6 470 482 5.8e-22 75.2 0.023 43.0 4.6
pfu_aug2.0_673.1_11067.t1 28 19 LRR_1 472 482 0.0 155.3 0.18 340.0 1.9
pfu_aug2.0_673.1_11067.t1 26 17 LRR_7 472 481 3.2e-31 101.7 1.1 2100.0 -0.2
pfu_aug2.0_673.1_11067.t1 17 13 LRR_4 507 542 0.0 261.5 2.9e-05 0.053 13.1
pfu_aug2.0_673.1_11067.t1 15 11 LRR_8 507 561 0.0 223.1 3.7e-09 6.8e-06 25.7
pfu_aug2.0_673.1_11067.t1 9 7 LRR_9 526 577 4.9e-10 39.2 0.035 65.0 3.0
pfu_aug2.0_673.1_11067.t1 23 17 LRR_6 527 538 5.8e-22 75.2 3.9 7200.0 -2.3
pfu_aug2.0_673.1_11067.t1 28 20 LRR_1 528 547 0.0 155.3 0.00083 1.5 9.1
pfu_aug2.0_673.1_11067.t1 26 18 LRR_7 528 542 3.2e-31 101.7 0.031 57.0 4.5
pfu_aug2.0_673.1_11067.t1 15 12 LRR_8 550 607 0.0 223.1 2.1e-12 3.8e-09 36.1
pfu_aug2.0_673.1_11067.t1 17 14 LRR_4 551 587 0.0 261.5 8.3e-13 1.5e-09 37.2
pfu_aug2.0_673.1_11067.t1 28 21 LRR_1 551 570 0.0 155.3 0.00021 0.39 10.9
pfu_aug2.0_673.1_11067.t1 26 19 LRR_7 551 565 3.2e-31 101.7 0.0018 3.3 8.2
pfu_aug2.0_673.1_11067.t1 23 18 LRR_6 551 563 5.8e-22 75.2 0.029 54.0 4.3
pfu_aug2.0_673.1_11067.t1 9 8 LRR_9 569 644 4.9e-10 39.2 0.00019 0.36 10.3
pfu_aug2.0_673.1_11067.t1 23 19 LRR_6 571 584 5.8e-22 75.2 0.0023 4.3 7.7
pfu_aug2.0_673.1_11067.t1 28 22 LRR_1 573 591 0.0 155.3 0.0058 11.0 6.5
pfu_aug2.0_673.1_11067.t1 26 20 LRR_7 573 585 3.2e-31 101.7 0.006 11.0 6.7
pfu_aug2.0_673.1_11067.t1 26 21 LRR_7 595 611 3.2e-31 101.7 0.038 70.0 4.3
pfu_aug2.0_673.1_11067.t1 23 20 LRR_6 595 607 5.8e-22 75.2 0.0011 2.1 8.6
pfu_aug2.0_673.1_11067.t1 17 15 LRR_4 596 631 0.0 261.5 5.5e-11 1.0e-07 31.3
pfu_aug2.0_673.1_11067.t1 15 13 LRR_8 596 654 0.0 223.1 5.0e-08 9.3e-05 22.1
pfu_aug2.0_673.1_11067.t1 28 23 LRR_1 596 617 0.0 155.3 7.9e-06 0.015 15.2
pfu_aug2.0_673.1_11067.t1 23 21 LRR_6 617 630 5.8e-22 75.2 0.005 9.2 6.6
pfu_aug2.0_673.1_11067.t1 15 14 LRR_8 619 677 0.0 223.1 1.8e-07 0.00033 20.3
pfu_aug2.0_673.1_11067.t1 28 24 LRR_1 619 636 0.0 155.3 0.0016 3.0 8.2
pfu_aug2.0_673.1_11067.t1 26 22 LRR_7 619 634 3.2e-31 101.7 0.0073 14.0 6.4
pfu_aug2.0_673.1_11067.t1 9 9 LRR_9 644 705 4.9e-10 39.2 0.023 42.0 3.6
pfu_aug2.0_673.1_11067.t1 28 25 LRR_1 646 662 0.0 155.3 0.061 110.0 3.4
pfu_aug2.0_673.1_11067.t1 17 16 LRR_4 648 677 0.0 261.5 0.57 1100.0 -0.6
pfu_aug2.0_673.1_11067.t1 26 23 LRR_7 648 658 3.2e-31 101.7 8.0 15000.0 -3.5
pfu_aug2.0_673.1_11067.t1 15 15 LRR_8 667 723 0.0 223.1 1.4e-10 2.5e-07 30.3
pfu_aug2.0_673.1_11067.t1 28 26 LRR_1 667 683 0.0 155.3 0.88 1600.0 -0.2
pfu_aug2.0_673.1_11067.t1 26 24 LRR_7 668 681 3.2e-31 101.7 3.3 6200.0 -1.6
pfu_aug2.0_673.1_11067.t1 17 17 LRR_4 690 727 0.0 261.5 2.1e-10 3.8e-07 29.5
pfu_aug2.0_673.1_11067.t1 28 27 LRR_1 690 710 0.0 155.3 0.00055 1.0 9.6
pfu_aug2.0_673.1_11067.t1 26 25 LRR_7 690 704 3.2e-31 101.7 0.13 240.0 2.6
pfu_aug2.0_673.1_11067.t1 23 22 LRR_6 690 700 5.8e-22 75.2 3.0 5500.0 -1.9
pfu_aug2.0_673.1_11067.t1 23 23 LRR_6 710 723 5.8e-22 75.2 0.0041 7.6 6.9
pfu_aug2.0_673.1_11067.t1 28 28 LRR_1 713 729 0.0 155.3 0.02 38.0 4.8
pfu_aug2.0_673.1_11067.t1 26 26 LRR_7 713 727 3.2e-31 101.7 0.018 33.0 5.2

Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug2.0_673.1_11067.t1 gi|676493082|ref|XP_009066129.1| hypothetical protein LOTGIDRAFT_133952 [Lottia gigantea] 0.0

Transcript
Transcript IDpfu_aug2.0_673.1_11067.t1
Definition- 
>pfu_aug2.0_673.1_11067.t1
atgagtaaggataaggacgaagttatcccccttgcgggtccaggtagcaaggtcaaagccctggctccgccactgaggaa
acatttcatcttttttgacgacaacagaaagatgatagttgacttctccacgaatggactgaaacttttacccttggaaa
tatggaagaatgaggaaatccaaataaaagcaattaagtttttggcagacagtaatcgattgaaaaaactgccgaaacaa
atttcggatttagaaaacctggaatatatcgacctgcgcaacaatacgctgggtgctgtgccgggaactattttcaagct
gaaaagtttaacggagttggactgctccaacaacaacataaagactctaccagcaaccatcaataaggcgccatcactag
aaattgtcacagcagtaaacaacaagataaaagccttacctaaaacgatcaacaaatgtccgactctggtgatcattgac
tgttctgataacgtcattagaagtttgaagaaaacaatctacgaagttggtgcagaaataattctgaaaaacaatcgcct
tgttgacctacccgatgctacaatcaagaatccggctttaaaaaagttggtggtgtccggaaattcaatttcacgaattc
cagaaaatatcaataatgtgtccactttgacgtggcttgacctctccgacaacgacttgacggaactcccgaaggaactc
ggatttctgaaatatcttcattatttgaatgtttcaatgaacaagattgactacttaccggacgaagtttgctcattgca
gttcgccttgacattccttcacgcgtctgataatgagatcaaaaacttgccgaccgacattcacaaacttcaacgactga
caactcttgaggttgcaaacaaccaactagagtccttaccagataagttctatgagatgaagaacattaaaactctcgat
ttgtcagggaacaaattacagacagcagcaggtatcagcaaactgaaatctgtagaacacgtcaaactggcgaataatgc
tatctccttcctaccggaggatctgccgcacctgaagtccttgatttctctggatgtgtcagggaatcacatcaaagtga
taccggaaaatctgtgtaaggttggaactctaaaatcgttcaaggcaaacaacaataaaatcagtgcaatcccagagtcc
ctaggtgacaatcagctaattacggaactttgcttatcacataaccgaattcaaggtctgcctcaagacttgaagaaact
ccgaagtctggaggtactagagattggtcacaatcaaatagacgctttgcctaaagcatttgatgttcttaagttcctac
gacatctgaaaatagcaggaaattctatcacggaatttgtcattcccaaaacgttggtttcactggacatctcagacaac
cctgtggtgcttccagcggcggatccaaggtcagttcttgtacaactaggagaaaaagcctgggcaagtcagtttacaga
gcttcttattgcagacattaagctggacgaggttcccgtatccatttcgcacatgaaattgctaaagaagttagacttga
agagaaaccttcttaaatccatacctgatgaactatgcagactaaggcttttggaagagctggacctagctgacaatgaa
ctgtctgaacttccagcttctatcaataacatgaaaaatctgcgaaaacttgatgtttcacaaaacaagatcgcggagtt
ctgccctggtctatgtttactgcatcagttagaacatctgaacatgtcgtataacaacatcatcgatttgcccgagaatt
ttggagaactcaacaaattgatcacattggatctatcgaataacgagctgatgggtctacctgaagacaaaatggacgtt
ctggcatccatgctagaaatagacgtttcgaagaatcatatcaatatgatcccaagcgactttccgtatttatatagaat
acgctcacttaaagcggcctctaatgaccttacggtcctccctggtgacatcatcaaaatggcgggacttgaagttcttg
acgtcacagataacttgttagagagtttaccagactccatatgcaagcttcctgttctgaaggacctgaacatttctgac
aacaaaataaaagctttcccatcaaaaatggaaagtttaaaacaacgatgtcaggttacaacaggaactcagtctgctta
caaacagcgggatgccccggatgggctaaagtccggggaagttcaaacggacgcagaagggtcaccaaaaagttcgagga
aaaacgattag

Protein
Protein IDpfu_aug2.0_673.1_11067.t1
Definition- 
>pfu_aug2.0_673.1_11067.t1
MSKDKDEVIPLAGPGSKVKALAPPLRKHFIFFDDNRKMIVDFSTNGLKLLPLEIWKNEEIQIKAIKFLADSNRLKKLPKQ
ISDLENLEYIDLRNNTLGAVPGTIFKLKSLTELDCSNNNIKTLPATINKAPSLEIVTAVNNKIKALPKTINKCPTLVIID
CSDNVIRSLKKTIYEVGAEIILKNNRLVDLPDATIKNPALKKLVVSGNSISRIPENINNVSTLTWLDLSDNDLTELPKEL
GFLKYLHYLNVSMNKIDYLPDEVCSLQFALTFLHASDNEIKNLPTDIHKLQRLTTLEVANNQLESLPDKFYEMKNIKTLD
LSGNKLQTAAGISKLKSVEHVKLANNAISFLPEDLPHLKSLISLDVSGNHIKVIPENLCKVGTLKSFKANNNKISAIPES
LGDNQLITELCLSHNRIQGLPQDLKKLRSLEVLEIGHNQIDALPKAFDVLKFLRHLKIAGNSITEFVIPKTLVSLDISDN
PVVLPAADPRSVLVQLGEKAWASQFTELLIADIKLDEVPVSISHMKLLKKLDLKRNLLKSIPDELCRLRLLEELDLADNE
LSELPASINNMKNLRKLDVSQNKIAEFCPGLCLLHQLEHLNMSYNNIIDLPENFGELNKLITLDLSNNELMGLPEDKMDV
LASMLEIDVSKNHINMIPSDFPYLYRIRSLKAASNDLTVLPGDIIKMAGLEVLDVTDNLLESLPDSICKLPVLKDLNISD
NKIKAFPSKMESLKQRCQVTTGTQSAYKQRDAPDGLKSGEVQTDAEGSPKSSRKND

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