Gene
| Gene Model ID | pfu_aug2.0_673.1_11066 |
|---|---|
| Locus | scaffold673.1 : 80366 ... 120132 : + |
| To GenomeBrowser | scaffold673.1:80366..120132 |
| Genes list of scaffold | scaffold673.1 |
| Synonym | pfu_aug1.0_1031.1_65750 |
Manual annotation
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| zinc finger protein 596 isoform x3 | GO:0003676 GO:0046872 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_673.1_11066.t1 | 6 | 1 | zf-H2C2_2 | 17 | 31 | 2.2e-13 | 49.7 | 7.9e-05 | 0.11 | 12.8 |
| pfu_aug2.0_673.1_11066.t1 | 4 | 1 | zf-C2H2 | 22 | 44 | 3.2e-15 | 55.4 | 4.7e-06 | 0.0063 | 16.7 |
| pfu_aug2.0_673.1_11066.t1 | 4 | 1 | zf-C2H2_4 | 22 | 44 | 5.0e-08 | 32.7 | 0.00012 | 0.16 | 12.3 |
| pfu_aug2.0_673.1_11066.t1 | 4 | 1 | zf-C2H2_jaz | 22 | 41 | 1.1e-06 | 28.5 | 2.6e-05 | 0.035 | 14.2 |
| pfu_aug2.0_673.1_11066.t1 | 6 | 2 | zf-H2C2_2 | 37 | 59 | 2.2e-13 | 49.7 | 5.0e-07 | 0.00067 | 19.8 |
| pfu_aug2.0_673.1_11066.t1 | 4 | 2 | zf-C2H2 | 50 | 72 | 3.2e-15 | 55.4 | 2.1e-08 | 2.8e-05 | 24.1 |
| pfu_aug2.0_673.1_11066.t1 | 4 | 2 | zf-C2H2_4 | 50 | 72 | 5.0e-08 | 32.7 | 0.00047 | 0.63 | 10.5 |
| pfu_aug2.0_673.1_11066.t1 | 4 | 2 | zf-C2H2_jaz | 50 | 69 | 1.1e-06 | 28.5 | 0.0045 | 6.0 | 7.1 |
| pfu_aug2.0_673.1_11066.t1 | 6 | 3 | zf-H2C2_2 | 64 | 88 | 2.2e-13 | 49.7 | 7.1e-10 | 9.6e-07 | 28.8 |
| pfu_aug2.0_673.1_11066.t1 | 4 | 3 | zf-C2H2 | 78 | 101 | 3.2e-15 | 55.4 | 4.4e-07 | 0.0006 | 20.0 |
| pfu_aug2.0_673.1_11066.t1 | 4 | 3 | zf-C2H2_4 | 78 | 101 | 5.0e-08 | 32.7 | 8.6e-07 | 0.0012 | 19.0 |
| pfu_aug2.0_673.1_11066.t1 | 4 | 3 | zf-C2H2_jaz | 78 | 98 | 1.1e-06 | 28.5 | 0.0078 | 11.0 | 6.3 |
| pfu_aug2.0_673.1_11066.t1 | 6 | 4 | zf-H2C2_2 | 92 | 102 | 2.2e-13 | 49.7 | 0.1 | 130.0 | 3.0 |
| pfu_aug2.0_673.1_11066.t1 | 6 | 5 | zf-H2C2_2 | 311 | 322 | 2.2e-13 | 49.7 | 0.0045 | 6.0 | 7.3 |
| pfu_aug2.0_673.1_11066.t1 | 4 | 4 | zf-C2H2 | 314 | 336 | 3.2e-15 | 55.4 | 0.001 | 1.4 | 9.4 |
| pfu_aug2.0_673.1_11066.t1 | 4 | 4 | zf-C2H2_4 | 314 | 334 | 5.0e-08 | 32.7 | 0.012 | 16.0 | 6.1 |
| pfu_aug2.0_673.1_11066.t1 | 4 | 4 | zf-C2H2_jaz | 314 | 333 | 1.1e-06 | 28.5 | 0.0023 | 3.0 | 8.0 |
| pfu_aug2.0_673.1_11066.t1 | 6 | 6 | zf-H2C2_2 | 334 | 345 | 2.2e-13 | 49.7 | 2.7 | 3600.0 | -1.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_673.1_11066.t1 | gi|524893428|ref|XP_005103229.1| | PREDICTED: zinc finger protein 629-like, partial [Aplysia californica] | 0.0 |
| pfu_aug2.0_673.1_11066.t1 | gi|676493079|ref|XP_009066128.1| | hypothetical protein LOTGIDRAFT_133765 [Lottia gigantea] | 0.0 |
| pfu_aug2.0_673.1_11066.t1 | gi|542193109|ref|XP_005471655.1| | PREDICTED: zinc finger protein 546-like [Oreochromis niloticus] | 8.0e-25 |
| pfu_aug2.0_673.1_11066.t1 | gi|557019428|ref|XP_006010069.1| | PREDICTED: zinc finger protein 628-like [Latimeria chalumnae] | 1.0e-23 |
| pfu_aug2.0_673.1_11066.t1 | gi|612059309|ref|XP_007507634.1| | PREDICTED: zinc finger protein 184-like isoform X2 [Monodelphis domestica] | 1.0e-23 |
Transcript
| Transcript ID | pfu_aug2.0_673.1_11066.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_673.1_11066.t1 atggatgaagatgggcccgaaaaaaattgcataagattacctgcaacaagtggaccccgaccttataaatgtgatgtgtg tcaaaggtcatttcgagaggtcgcgaccttgaggaaacatgaacagcttcacagagcagaccgtccgtatgtgtgtaaca cgtgcggtaaatcgtttttgtggtcatccaacttgaaggtgcatgaaagagttcacactggggagcgaccttataaatgt aaaatatgtcacaggtgttttacacaatcaaacgatttgcgaagacacgaaagaaatgtccaccagcgtggtaagatggt gaactacagatcctccctggcccaggggaggggcggggtctcgggtcacatgaatatcgccacctatcaagcctttgcca tgcagcagagggcccttcttcaacatgcattgacctatgaaagcctgatgcataatgcagcagccgtaacacaagctaga ttcatgcagggtcaagttggtctatcagaatccatgtccgtatctctacctcctatgagcacagccaatgacctggccgt ttctacctcatcagacactcctcgtctatctcaacgtacaccagactccattaagctagagcaagttacgcccccttcat ctcctggtagcaatgagactgagcgccagtcaaggggcattgagagatcactatccagccctaccatggggcgacagact ggggaacaacaaaactttatttcaaggcctagcagctcctcacagatgccagcaacaagtggtgtgatccactcaccccc caccctaccctcatctacgtaccacgggtataatggacggtctctgtcagtcaatggcagtccccctggaccacacgggc ggagcttagcttctcctcagtctgcattcagtctgcactctcccgatgacgaggatccgtttagatgtccctcctgtcag aaacgatgccaggaccgcatagagtttatgtttcacatggtgtggcatgtcaagtatccccataccatacctaactacga acctttcaaagaaacctaccaaacctag |
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Protein
| Protein ID | pfu_aug2.0_673.1_11066.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_673.1_11066.t1 MDEDGPEKNCIRLPATSGPRPYKCDVCQRSFREVATLRKHEQLHRADRPYVCNTCGKSFLWSSNLKVHERVHTGERPYKC KICHRCFTQSNDLRRHERNVHQRGKMVNYRSSLAQGRGGVSGHMNIATYQAFAMQQRALLQHALTYESLMHNAAAVTQAR FMQGQVGLSESMSVSLPPMSTANDLAVSTSSDTPRLSQRTPDSIKLEQVTPPSSPGSNETERQSRGIERSLSSPTMGRQT GEQQNFISRPSSSSQMPATSGVIHSPPTLPSSTYHGYNGRSLSVNGSPPGPHGRSLASPQSAFSLHSPDDEDPFRCPSCQ KRCQDRIEFMFHMVWHVKYPHTIPNYEPFKETYQT |
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