Gene
| Gene Model ID | pfu_aug2.0_60.1_00165 |
|---|---|
| Locus | scaffold60.1 : 519602 ... 524309 : - |
| To GenomeBrowser | scaffold60.1:519602..524309 |
| Genes list of scaffold | scaffold60.1 |
| Synonym | pfu_aug1.0_25684.1_33524 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_60.1_00165.t1 | 2 | 1 | Aminotran_5 | 59 | 125 | 3.6e-20 | 72.0 | 9.4e-07 | 0.007 | 15.1 |
| pfu_aug2.0_60.1_00165.t1 | 2 | 2 | Aminotran_5 | 133 | 276 | 3.6e-20 | 72.0 | 7.9e-19 | 5.9e-15 | 54.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_60.1_00165.t1 | gi|585668130|ref|XP_002735488.2| | PREDICTED: uncharacterized aminotransferase C660.12c-like [Saccoglossus kowalevskii] | 0.0 |
| pfu_aug2.0_60.1_00165.t1 | gi|676436154|ref|XP_009047789.1| | hypothetical protein LOTGIDRAFT_200298, partial [Lottia gigantea] | 0.0 |
| pfu_aug2.0_60.1_00165.t1 | gi|198416085|ref|XP_002122357.1| | PREDICTED: uncharacterized aminotransferase C660.12c [Ciona intestinalis] | 0.0 |
| pfu_aug2.0_60.1_00165.t1 | gi|390359865|ref|XP_003729578.1| | PREDICTED: putative L-cysteine desulfhydrase 1 [Strongylocentrotus purpuratus] | 0.0 |
| pfu_aug2.0_60.1_00165.t1 | gi|676426687|ref|XP_009044703.1| | hypothetical protein LOTGIDRAFT_176332 [Lottia gigantea] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_60.1_00165.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_60.1_00165.t1 atgattaaatttgaagtaaataaatgtgtagatagcgatcgtcgtgaacgtttcactcgattttcagtggacatggcaga taaagattccccagtttttggacaatcagttcgagagaaagaattcaaccttgagaaagactggaattttctcaatactg gttcctatggcgtgaccccgaaatgcgtccaagaggctcaacaaaggcaccaactcaagatgaacagtcatccagagaaa tggttccgcagagaggtggaaccactgtacaaagaggccacgaaggaagccgcggattttgttggctgtgattcacaaga tcttgtttttgtacaaaatgccaccacaggtcatgccatttacatattatcatttataacatataaatgtgtatatgtgt tagatcacatcacaagtcctacagcaatggttttacctgttaagaaaatagccgccctctgtcaagagaacgaaattcta agtatgatagatggcgctcatgccccgggacaattggatctgaacattgaagaactaaatgtcgacttctatacaggaaa tttccataaatgggtgttcactccaagaggctgtgctattctgtacataaataggaagcatcatgattgggtaaagcctt tagtgacgtcacataattaccaaagaggtccatactgggagtttgagtaccagggcaccagagatgacacaccctatact gtcgttcctcatgcattacaattctacaagagaatgggtggagtcagtcgagttcgagaatacaattcagacttactaga taaagccgttgagatgttatgttcatcatttgatctcagacggttccccataccaagatccatggaggcaccgtacatga ggcttcttatactacctaaagtccccggatatgggacaacggaagaggatgcaaacagactctttgcctattttgcggag aagtacaacatagtgttgttggttgtttcagttttcgatcatctcattataaggctctctgcccagatattcaacaccat ggacgattataatcaaatcgttgacatcctaaaggatttattgaaaaaagacgatgagaaatag |
|
Protein
| Protein ID | pfu_aug2.0_60.1_00165.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_60.1_00165.t1 MIKFEVNKCVDSDRRERFTRFSVDMADKDSPVFGQSVREKEFNLEKDWNFLNTGSYGVTPKCVQEAQQRHQLKMNSHPEK WFRREVEPLYKEATKEAADFVGCDSQDLVFVQNATTGHAIYILSFITYKCVYVLDHITSPTAMVLPVKKIAALCQENEIL SMIDGAHAPGQLDLNIEELNVDFYTGNFHKWVFTPRGCAILYINRKHHDWVKPLVTSHNYQRGPYWEFEYQGTRDDTPYT VVPHALQFYKRMGGVSRVREYNSDLLDKAVEMLCSSFDLRRFPIPRSMEAPYMRLLILPKVPGYGTTEEDANRLFAYFAE KYNIVLLVVSVFDHLIIRLSAQIFNTMDDYNQIVDILKDLLKKDDEK |
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