Gene
Gene Model ID | pfu_aug2.0_60.1_00164 |
---|---|
Locus | scaffold60.1 : 508847 ... 514373 : - |
To GenomeBrowser | scaffold60.1:508847..514373 |
Genes list of scaffold | scaffold60.1 |
Synonym | pfu_aug1.0_1324.1_58439 |
Manual annotation
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
pfu_aug2.0_60.1_00164.t1 | 1 | 1 | adh_short | 7 | 168 | 6.4e-28 | 97.7 | 3.4e-31 | 1.0e-27 | 97.0 |
pfu_aug2.0_60.1_00164.t1 | 1 | 1 | KR | 7 | 170 | 4.7e-10 | 39.4 | 2.3e-13 | 6.9e-10 | 38.8 |
pfu_aug2.0_60.1_00164.t1 | 1 | 1 | adh_short_C2 | 10 | 237 | 8.8e-20 | 71.4 | 7.8e-23 | 2.3e-19 | 70.1 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
pfu_aug2.0_60.1_00164.t1 | gi|114050773|ref|NP_001040155.1| | short-chain dehydrogenease/reductase-like [Bombyx mori] | 0.0 |
pfu_aug2.0_60.1_00164.t1 | gi|751223554|ref|XP_011165069.1| | PREDICTED: dehydrogenase/reductase SDR family member 4-like [Solenopsis invicta] | 0.0 |
Transcript
Transcript ID | pfu_aug2.0_60.1_00164.t1 |
---|---|
Definition | - |
>pfu_aug2.0_60.1_00164.t1 atgaaccaaattcgtgcaacaggagcaagttcgggacttggtgaagccattgcctaccactttgccaagaatgggtacaa actatcattgattggacggagtaaagagaacttagaaatagttgtagagaaatgccgaggctttggacttgcgaaagaaa aggttatatacttaacgggagatattactgatggatctaccaggaaatacctcatagataacacaatgtcctcttttgga aggatcgacgtcctcatcaacaacgccggtgtgctgacagtggggatgtacagtgatactagtgagagtgaataccgacg tgtcatagaaacaaaccaaacatcaccttatcttcttactcaactcgctataccacatctcaagcagagcaaaggaaata ttgttaacgtatccagtatatgctcccacagagtgacgaacttaggattatcagcgtattcgatgtctaaagctgcgatg aacatgtatacccagtacctcgcattaggtgcagttccaacaagtcttgggagaaacaaagatgggactgtgacaggacc agaacattggaatgctcgtatggctagaacagcccagctgacacctcttgcgcggaacggtacaccagaggaaatagcag aggtcgtgggattcatagcatctgataaagctgcctatatgactggggaaaatctggttatagatggaggacgtcagtgc atgtgtaactttctgtatgcagacaggaaatga |
Protein
Protein ID | pfu_aug2.0_60.1_00164.t1 |
---|---|
Definition | - |
>pfu_aug2.0_60.1_00164.t1 MNQIRATGASSGLGEAIAYHFAKNGYKLSLIGRSKENLEIVVEKCRGFGLAKEKVIYLTGDITDGSTRKYLIDNTMSSFG RIDVLINNAGVLTVGMYSDTSESEYRRVIETNQTSPYLLTQLAIPHLKQSKGNIVNVSSICSHRVTNLGLSAYSMSKAAM NMYTQYLALGAVPTSLGRNKDGTVTGPEHWNARMARTAQLTPLARNGTPEEIAEVVGFIASDKAAYMTGENLVIDGGRQC MCNFLYADRK |