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OIST Marine Genomics Unit since 2008

Gene
Gene Model IDpfu_aug2.0_60.1_00161
Locus scaffold60.1 : 464984 ... 478795 : +
To GenomeBrowser scaffold60.1:464984..478795
Genes list of scaffold scaffold60.1
Synonym pfu_aug1.0_15034.1_32499

Manual annotation
Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
pfu_aug2.0_60.1_00161.t1 1 1 adh_short 120 297 9.0e-22 77.7 1.4e-24 5.3e-21 75.2
pfu_aug2.0_60.1_00161.t1 1 1 KR 120 292 7.2e-06 25.7 3.7e-09 1.4e-05 24.8
pfu_aug2.0_60.1_00161.t1 1 1 adh_short_C2 123 375 4.5e-26 92.0 1.6e-29 6.1e-26 91.6

Blast Hit to nr / sp
query Subject ID Subject Name evalue
pfu_aug2.0_60.1_00161.t1 gi|759080170|ref|XP_011349917.1| PREDICTED: tropinone reductase 2-like [Cerapachys biroi] 1.4013e-45

Transcript
Transcript IDpfu_aug2.0_60.1_00161.t1
Definition-
>pfu_aug2.0_60.1_00161.t1
atgtacagatgtactctacaccaaaattatccaagaaaattgatagagccagccccctcctttgatttctctcagcagaa
aggacagatggtcgggaccctgtcttctctaaagaggtttggacagggtccgtcatggagtcccgtcatgagagtcagtg
ataatgcaagtctaagaatacgctggtacgagactgtagactggtcaagtaccaaatctagtgtccctctggtgacgtta
ggatcatatccacggattgtcaatagtaaggatgccttccagatacctagaagtattattgcaacacttcaaataatcaa
atcagaggatattaagaggtgcctcttgcgttactttacaggtgcaagttctggaatcggcgaaggaattgcatatcatc
ttgcatcacgtggatccaaaatgtcacttgtagcaagaaataaagagaaactcataaatgttgtagaaaattgcattaag
aaaggacttcctaaggaaaaggcaattttttattacagcttcattgtctgtcatttttcattgaaggttacttacactat
aggagatttaacagaagacgctgtgcggagagaactaataaattctacagtatctgcgtttggagtgatcgatgtactaa
tcaacaatgcaggaattgctaaacttggaccaattgccgatgtgtcggaggaagactatcgcagagttcttgaggtcaat
caaacgactccttatttactcactcaacttgctgtaccacatctgaaaaagagcaaaggtggaaacgttataagcatatc
aagtattgcgggaaatgctacgccctatgtaggattctcagtgtattctatgacaaaagctgcgttgaatattttcagta
aatttcttgcgatagaactggccaagtttgatattcggtcaaatacaattagcccagggatcattaagacaaatataaat
gctgctatggaacctgacgaggagaagagaaatgctagatttaacagtcaaattccacatattccggtaggacgactagg
aacacctaaggatatagctgaggcagtcgtcttccttataacagcaacatggataacaggagaaaacatgatcgtcgatg
gaggacgtcagctattcaccaagctacctgaaatagaacaagcgcaactttga

Protein
Protein IDpfu_aug2.0_60.1_00161.t1
Definition-
>pfu_aug2.0_60.1_00161.t1
MYRCTLHQNYPRKLIEPAPSFDFSQQKGQMVGTLSSLKRFGQGPSWSPVMRVSDNASLRIRWYETVDWSSTKSSVPLVTL
GSYPRIVNSKDAFQIPRSIIATLQIIKSEDIKRCLLRYFTGASSGIGEGIAYHLASRGSKMSLVARNKEKLINVVENCIK
KGLPKEKAIFYYSFIVCHFSLKVTYTIGDLTEDAVRRELINSTVSAFGVIDVLINNAGIAKLGPIADVSEEDYRRVLEVN
QTTPYLLTQLAVPHLKKSKGGNVISISSIAGNATPYVGFSVYSMTKAALNIFSKFLAIELAKFDIRSNTISPGIIKTNIN
AAMEPDEEKRNARFNSQIPHIPVGRLGTPKDIAEAVVFLITATWITGENMIVDGGRQLFTKLPEIEQAQL

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