Gene
| Gene Model ID | pfu_aug2.0_60.1_00160 |
|---|---|
| Locus | scaffold60.1 : 451724 ... 462220 : + |
| To GenomeBrowser | scaffold60.1:451724..462220 |
| Genes list of scaffold | scaffold60.1 |
| Synonym | pfu_aug1.0_38467.1_12333 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_60.1_00160.t1 | 1 | 1 | adh_short | 10 | 179 | 9.2e-31 | 107.0 | 7.0e-34 | 1.1e-30 | 106.6 |
| pfu_aug2.0_60.1_00160.t1 | 1 | 1 | KR | 12 | 178 | 6.1e-10 | 39.0 | 4.8e-13 | 8.0e-10 | 38.6 |
| pfu_aug2.0_60.1_00160.t1 | 1 | 1 | adh_short_C2 | 18 | 254 | 2.9e-29 | 102.5 | 2.1e-32 | 3.4e-29 | 102.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_60.1_00160.t1 | gi|676462933|ref|XP_009056431.1| | hypothetical protein LOTGIDRAFT_120239, partial [Lottia gigantea] | 0.0 |
| pfu_aug2.0_60.1_00160.t1 | gi|751223542|ref|XP_011165062.1| | PREDICTED: dehydrogenase/reductase SDR family member 4-like [Solenopsis invicta] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_60.1_00160.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_60.1_00160.t1 atggaaatttctgacaatgtgcaggataaaattgttatagtgacaggatcaagttccggtattggcgaggggatcagtta ttatctagcatcacgtggatgtaagctttccttaacagggagaaacaaggaaaacctggagaaagttgtccaaaactgca ttagtaatggactttctaaagaaaaggtgacccaccttgtgggagatttgacagatggagatttccgaaagaaattaatt gaacatactgtgaccgtgtttggtggcattgatgtactcattaataatgctggtattgggagagtagcggcttttgctga tatgccggaggagatttaccgtaatgtgattgagactaatcaaaccacacctttcttcctgacacagctagccatacctc atctgaagagaagcaaaggcaatattgtaaatatttcaagtattagttctaaagcaaggcctggcccaggtacttcagct tatgggatgtcaaaggcggcactggatatgtttactcgatacctggcagtagaactggctcaatttggtattcgggcaaa ttcaatcagtccaggatatgtcaaaacaagtatagccgatgttccattccctgacgacaaggatagggaagtcatgtggg aaataggaagagttaccacaccattgggtcgactgggaacagctgaggatattgcccaggctgttgttttcctaatgtgt gcatcctgggtcacgggagaagagatggttgtcgatggaggacgcaagttttactcaataccaaatgctacataa |
|
Protein
| Protein ID | pfu_aug2.0_60.1_00160.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_60.1_00160.t1 MEISDNVQDKIVIVTGSSSGIGEGISYYLASRGCKLSLTGRNKENLEKVVQNCISNGLSKEKVTHLVGDLTDGDFRKKLI EHTVTVFGGIDVLINNAGIGRVAAFADMPEEIYRNVIETNQTTPFFLTQLAIPHLKRSKGNIVNISSISSKARPGPGTSA YGMSKAALDMFTRYLAVELAQFGIRANSISPGYVKTSIADVPFPDDKDREVMWEIGRVTTPLGRLGTAEDIAQAVVFLMC ASWVTGEEMVVDGGRKFYSIPNAT |
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