Gene
| Gene Model ID | pfu_aug2.0_60.1_00159 |
|---|---|
| Locus | scaffold60.1 : 417277 ... 449463 : - |
| To GenomeBrowser | scaffold60.1:417277..449463 |
| Genes list of scaffold | scaffold60.1 |
| Synonym | pfu_aug1.0_1324.1_58434 |
Manual annotation
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| pfu_aug2.0_60.1_00159.t2 | 3 | 1 | adh_short | 3 | 171 | 0.0 | 206.0 | 1.6e-31 | 4.8e-28 | 98.1 |
| pfu_aug2.0_60.1_00159.t2 | 3 | 1 | KR | 4 | 168 | 7.3e-16 | 58.3 | 1.5e-10 | 4.6e-07 | 29.6 |
| pfu_aug2.0_60.1_00159.t2 | 3 | 1 | adh_short_C2 | 11 | 252 | 0.0 | 214.6 | 7.0e-35 | 2.1e-31 | 109.5 |
| pfu_aug2.0_60.1_00159.t2 | 3 | 2 | adh_short | 279 | 388 | 0.0 | 206.0 | 1.0e-24 | 3.0e-21 | 76.0 |
| pfu_aug2.0_60.1_00159.t2 | 3 | 2 | KR | 280 | 385 | 7.3e-16 | 58.3 | 3.8e-07 | 0.0011 | 18.6 |
| pfu_aug2.0_60.1_00159.t2 | 3 | 2 | adh_short_C2 | 282 | 388 | 0.0 | 214.6 | 1.0e-11 | 3.1e-08 | 33.6 |
| pfu_aug2.0_60.1_00159.t2 | 3 | 3 | KR | 379 | 425 | 7.3e-16 | 58.3 | 0.0003 | 0.89 | 9.1 |
| pfu_aug2.0_60.1_00159.t2 | 3 | 3 | adh_short | 384 | 428 | 0.0 | 206.0 | 4.4e-11 | 1.3e-07 | 31.6 |
| pfu_aug2.0_60.1_00159.t2 | 3 | 3 | adh_short_C2 | 391 | 500 | 0.0 | 214.6 | 1.8e-22 | 5.4e-19 | 68.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| pfu_aug2.0_60.1_00159.t2 | gi|746844463|ref|XP_011052494.1| | PREDICTED: LOW QUALITY PROTEIN: probable NADP-dependent mannitol dehydrogenase [Acromyrmex echinatior] | 0.0 |
Transcript
| Transcript ID | pfu_aug2.0_60.1_00159.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_60.1_00159.t1 atggataaagttgtaattgtaacaggagccagttctggtatcggagaggggattagttatctgtttgcctcacatggatg taagttatccgtgattggaagaaataaagacaggattgaaaaggtcgccacaacatgtgtcaataacggacttcctaaag aaaatgttatttgtatggcaggagatcttacagatcgtgaaacaagaaacactcttattcaaaacacattaaaagcattt ggacgtatagacatactgataaacaatgctggtgtgggtggcatgggagtatgtgttgatacgtctgagtctgactatag gcacattatagagaccaatcagagcgtgccattcttcctcacccaactggccatccctcacctcaaagaaagcaaaggaa atgtagtgaatgtttctagtgttggtggacatagagcaactttaggaatcactgcatattgcatgtctaaggctgcctta aatatgtttactcaatgtctagctttagagcttgcaccatttggagtaagagtaaattccgtaagcccaggtagcgttcc taccggcatagcgagggacaaggatggaaatatgctagaacgatcccaattagaaaagatgcttgctgaggacgcaaagc gcacacctttaggacgaaccggtactactcaagaaattgccgaggctgttttctttttagcctctgataaggcatcatgg acgacgggagagaacatgatgattgatggtggattccagtgtgctagtagaggagatggtattgtaattcggattatgtg cattcaacctgtccaattatcaggatatacgcggatattagacgacaaacaaccacaacatgaacagaatgccttctga |
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| Transcript ID | pfu_aug2.0_60.1_00159.t2 |
| Definition | - |
>pfu_aug2.0_60.1_00159.t2 atggataaagttgtaattgtaacaggagccagttctggtatcggagaggggattagttatctgtttgcctcacatggatg taagttatccgtgattggaagaaataaagacaggattgaaaaggtcgccacaacatgtgtcaataacggacttcctaaag aaaatgttatttgtatggcaggagatcttacagatcgtgaaacaagaaacactcttattcaaaacacattaaaagcattt ggacgtatagacatactgataaacaatgctggtgtgggtggcatgggagtatgtgttgatacgtctgagtctgactatag gcacattatagagaccaatcagagcgtgccattcttcctcacccaactggccatccctcacctcaaagaaagcaaaggaa atgtagtgaatgtttctagtgttggtggacatagagcaactttaggaatcactgcatattgcatgtctaaggctgcctta aatatgtttactcaatgtctagctttagagcttgcaccatttggagtaagagtaaattccgtaagcccaggtagcgttcc taccggcatagcgagggacaaggatggaaatatgctagaacgatcccaattagaaaagatgcttgctgaggacgcaaagc gcacacctttaggacgaaccggtactactcaagaaattgccgaggctgttttctttttagcctctgataaggcatcatgg acgacgggagagaacatgatgattgatggtggattccagtgtgctagtagaggtctttatgtgtgtgatttaatgggatc acatgccattgatgtaatattaatgattgtccataccattggagatctcactgatagcaatgtaagaaaaacgctcatcg atacaaccattaagtcattcggaaaaatcgatgtattgataaataatgctggaatcctagcgatcggtatgtgtggtgat acaagcgaggatgattaccgaggtatcatagaaacaaatcaaaacgttccctttctgttaacacaattggctttgccata tctgaagaaaagcaaaggtaatattgtcaacatttcaagtgtagctggacaccgatcgacacatggaattactgcttata gtatggcgaaggctgcattgaacatgctaacacagacgctggcattaggtaacatcgtcaatatttcaagtgtagctgga caccgatcgacacatggaattactgcttatagtatggcaaaggctgccctgaacatgctgacacagacgctggcattaga actggcgccgtatggagttcgagctaatgcggtcagtccaggagttgtcccgtcggttatggtggacagagaatttagta aggaggtgaaaaaagaggaatcaaaacgtcatccccttggacgccttggaactacagttgatatttctgaggctgtcgca tttttggcatctgaaaaggcgtcatgggttacaggggaaatatttacgatagacggaggacgccaatgtcactgtgatag tctcgtacctggggacaaatacaaggaagcgtcaaactga |
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Protein
| Protein ID | pfu_aug2.0_60.1_00159.t1 |
|---|---|
| Definition | - |
>pfu_aug2.0_60.1_00159.t1 MDKVVIVTGASSGIGEGISYLFASHGCKLSVIGRNKDRIEKVATTCVNNGLPKENVICMAGDLTDRETRNTLIQNTLKAF GRIDILINNAGVGGMGVCVDTSESDYRHIIETNQSVPFFLTQLAIPHLKESKGNVVNVSSVGGHRATLGITAYCMSKAAL NMFTQCLALELAPFGVRVNSVSPGSVPTGIARDKDGNMLERSQLEKMLAEDAKRTPLGRTGTTQEIAEAVFFLASDKASW TTGENMMIDGGFQCASRGDGIVIRIMCIQPVQLSGYTRILDDKQPQHEQNAF |
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| Protein ID | pfu_aug2.0_60.1_00159.t2 |
| Definition | - |
>pfu_aug2.0_60.1_00159.t2 MDKVVIVTGASSGIGEGISYLFASHGCKLSVIGRNKDRIEKVATTCVNNGLPKENVICMAGDLTDRETRNTLIQNTLKAF GRIDILINNAGVGGMGVCVDTSESDYRHIIETNQSVPFFLTQLAIPHLKESKGNVVNVSSVGGHRATLGITAYCMSKAAL NMFTQCLALELAPFGVRVNSVSPGSVPTGIARDKDGNMLERSQLEKMLAEDAKRTPLGRTGTTQEIAEAVFFLASDKASW TTGENMMIDGGFQCASRGLYVCDLMGSHAIDVILMIVHTIGDLTDSNVRKTLIDTTIKSFGKIDVLINNAGILAIGMCGD TSEDDYRGIIETNQNVPFLLTQLALPYLKKSKGNIVNISSVAGHRSTHGITAYSMAKAALNMLTQTLALGNIVNISSVAG HRSTHGITAYSMAKAALNMLTQTLALELAPYGVRANAVSPGVVPSVMVDREFSKEVKKEESKRHPLGRLGTTVDISEAVA FLASEKASWVTGEIFTIDGGRQCHCDSLVPGDKYKEASN |
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